RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 TRGV1A0A0A0MS02 117 aa9.42□□□□□ -0.9
CLK3-218ENST00000566926 CKS2P33552 79 aa9.42□□□□□ -0.9
CLK3-218ENST00000566926 MRPL51Q4U2R6 128 aaKnown RBP9.42□□□□□ -0.9
CLK3-218ENST00000566926 COA6Q5JTJ3 125 aaKnown RBP9.42□□□□□ -0.9
CLK3-218ENST00000566926 ZFP2Q6ZN57 461 aa9.42□□□□□ -0.9
CLK3-218ENST00000566926 Q6ZTI0 123 aa9.42□□□□□ -0.9
CLK3-218ENST00000566926 H7C1H1 209 aa9.41□□□□□ -0.9
CLK3-218ENST00000566926 NUDT3O95989 172 aa9.41□□□□□ -0.9
CLK3-218ENST00000566926 RNF185Q96GF1 192 aa9.41□□□□□ -0.9
CLK3-218ENST00000566926 KIF25-AS1Q9Y6Z4 181 aa9.41□□□□□ -0.9
CLK3-218ENST00000566926 D6R8Y8 96 aa9.4□□□□□ -0.9
CLK3-218ENST00000566926 H3BNG1 76 aa9.4□□□□□ -0.9
CLK3-218ENST00000566926 KIAA1644Q3SXP7 199 aa9.4□□□□□ -0.9
CLK3-218ENST00000566926 PRELID3AQ96N28 172 aa9.4□□□□□ -0.9
CLK3-218ENST00000566926 TRAV4A0A0B4J268 109 aa9.39□□□□□ -0.91
CLK3-218ENST00000566926 RS1O15537 224 aa9.39□□□□□ -0.91
CLK3-218ENST00000566926 CRYGDP07320 174 aa9.39□□□□□ -0.91
CLK3-218ENST00000566926 MGPP08493 103 aa9.39□□□□□ -0.91
CLK3-218ENST00000566926 BAGE3Q86Y29 109 aa9.39□□□□□ -0.91
CLK3-218ENST00000566926 VPS13DQ5THJ4 4388 aa9.38□□□□□ -0.91
CLK3-218ENST00000566926 TRAV26-1A0A087WT03 109 aa9.38□□□□□ -0.91
CLK3-218ENST00000566926 CCL18P55774 89 aa9.38□□□□□ -0.91
CLK3-218ENST00000566926 NDUFA6P56556 154 aa9.38□□□□□ -0.91
CLK3-218ENST00000566926 LINC00315P59091 139 aa9.38□□□□□ -0.91
CLK3-218ENST00000566926 FAM74A4Q5TZK3 123 aa9.38□□□□□ -0.91
CLK3-218ENST00000566926 CFAP126Q5VTH2 177 aa9.38□□□□□ -0.91
CLK3-218ENST00000566926 C18orf32Q8TCD1 76 aa9.38□□□□□ -0.91
CLK3-218ENST00000566926 C20orf78Q9BR46 151 aa9.38□□□□□ -0.91
CLK3-218ENST00000566926 MAP1LC3AQ9H492 121 aa9.38□□□□□ -0.91
CLK3-218ENST00000566926 MRPL16Q9NX20 251 aaKnown RBP9.38□□□□□ -0.91
CLK3-218ENST00000566926 DNAH6Q9C0G6 4158 aa9.37□□□□□ -0.91
CLK3-218ENST00000566926 A0A087WWL8 130 aa9.37□□□□□ -0.91
CLK3-218ENST00000566926 F5H697 171 aa9.37□□□□□ -0.91
CLK3-218ENST00000566926 HOXA5P20719 270 aa9.37□□□□□ -0.91
CLK3-218ENST00000566926 ZNF56Q15929 161 aa9.37□□□□□ -0.91
CLK3-218ENST00000566926 OR4C5Q8NGB2 326 aa9.37□□□□□ -0.91
CLK3-218ENST00000566926 CHCHD1Q96BP2 118 aaKnown RBP9.37□□□□□ -0.91
CLK3-218ENST00000566926 A0A0J9YY99 117 aa9.36□□□□□ -0.91
CLK3-218ENST00000566926 C5orf52A6NGY3 159 aa9.36□□□□□ -0.91
CLK3-218ENST00000566926 PRSS47A8MTI9 375 aa9.36□□□□□ -0.91
CLK3-218ENST00000566926 TNFRSF6BO95407 300 aa9.36□□□□□ -0.91
CLK3-218ENST00000566926 PMCHP20382 165 aa9.36□□□□□ -0.91
CLK3-218ENST00000566926 RPL32P62910 135 aaKnown RBP9.36□□□□□ -0.91
CLK3-218ENST00000566926 UFSP1Q6NVU6 142 aa9.36□□□□□ -0.91
CLK3-218ENST00000566926 NXT2Q9NPJ8 142 aaKnown RBP9.36□□□□□ -0.91
CLK3-218ENST00000566926 K7EMI3 77 aa9.35□□□□□ -0.91
CLK3-218ENST00000566926 ESDP10768 282 aa9.35□□□□□ -0.91
CLK3-218ENST00000566926 SUMO4Q6EEV6 95 aa9.35□□□□□ -0.91
CLK3-218ENST00000566926 NRACQ8N912 160 aa9.35□□□□□ -0.91
CLK3-218ENST00000566926 SAMD10Q9BYL1 202 aa9.35□□□□□ -0.91
CLK3-218ENST00000566926 JPT2Q9H910 190 aa9.35□□□□□ -0.91
CLK3-218ENST00000566926 PRO0255Q9UI72 69 aa9.35□□□□□ -0.91
CLK3-218ENST00000566926 TRBV6-5A0A0K0K1A5 114 aa9.34□□□□□ -0.91
CLK3-218ENST00000566926 M0QY20 66 aa9.34□□□□□ -0.91
CLK3-218ENST00000566926 NCR2O95944 276 aa9.34□□□□□ -0.91
CLK3-218ENST00000566926 NPYP01303 97 aa9.34□□□□□ -0.91
CLK3-218ENST00000566926 IGHV3-53P01767 116 aa9.34□□□□□ -0.91
CLK3-218ENST00000566926 SUMO2P61956 95 aaKnown RBP9.34□□□□□ -0.91
CLK3-218ENST00000566926 SNRPEP62304 92 aaKnown RBP9.34□□□□□ -0.91
CLK3-218ENST00000566926 PRSS3P2Q8NHM4 247 aa9.34□□□□□ -0.91
CLK3-218ENST00000566926 PACRGQ96M98 296 aaPredicted RBP9.34□□□□□ -0.91
CLK3-218ENST00000566926 TRAV26-2A0A0B4J265 109 aa9.33□□□□□ -0.92
CLK3-218ENST00000566926 TRGV4A0A0C4DH28 118 aa9.33□□□□□ -0.92
CLK3-218ENST00000566926 TRBV10-1A0A0K0K1A3 114 aa9.33□□□□□ -0.92
CLK3-218ENST00000566926 TCAPO15273 167 aa9.33□□□□□ -0.92
CLK3-218ENST00000566926 PAX4O43316 350 aa9.33□□□□□ -0.92
CLK3-218ENST00000566926 SERF1AO75920 110 aa9.33□□□□□ -0.92
CLK3-218ENST00000566926 LINC00614P0C842 121 aa9.33□□□□□ -0.92
CLK3-218ENST00000566926 S100A2P29034 98 aa9.33□□□□□ -0.92
CLK3-218ENST00000566926 FA2HQ7L5A8 372 aa9.33□□□□□ -0.92
CLK3-218ENST00000566926 DNAJC30Q96LL9 226 aa9.33□□□□□ -0.92
CLK3-218ENST00000566926 ST20Q9HBF5 79 aa9.33□□□□□ -0.92
CLK3-218ENST00000566926 NIT2Q9NQR4 276 aa9.33□□□□□ -0.92
CLK3-218ENST00000566926 AP5S1Q9NUS5 200 aa9.33□□□□□ -0.92
CLK3-218ENST00000566926 HHLA3Q9XRX5 114 aa9.33□□□□□ -0.92
CLK3-218ENST00000566926 IGLV2-18A0A075B6J9 118 aa9.32□□□□□ -0.92
CLK3-218ENST00000566926 SMKR1H3BMG3 65 aa9.32□□□□□ -0.92
CLK3-218ENST00000566926 M0R2N4 97 aa9.32□□□□□ -0.92
CLK3-218ENST00000566926 HSBP1O75506 76 aa9.32□□□□□ -0.92
CLK3-218ENST00000566926 LINC00336Q6ZUF6 198 aa9.32□□□□□ -0.92
CLK3-218ENST00000566926 Q8N8P6 123 aa9.32□□□□□ -0.92
CLK3-218ENST00000566926 VSIG2Q96IQ7 327 aa9.32□□□□□ -0.92
CLK3-218ENST00000566926 LINC00588Q9Y4M8 146 aa9.32□□□□□ -0.92
CLK3-218ENST00000566926 ICOSQ9Y6W8 199 aa9.32□□□□□ -0.92
CLK3-218ENST00000566926 TRBV6-4A0A1B0GX49 114 aa9.31□□□□□ -0.92
CLK3-218ENST00000566926 LINC01546A6NGU7 62 aa9.31□□□□□ -0.92
CLK3-218ENST00000566926 G0S2P27469 103 aa9.31□□□□□ -0.92
CLK3-218ENST00000566926 CRYBA4P53673 196 aa9.31□□□□□ -0.92
CLK3-218ENST00000566926 FHL2Q14192 279 aa9.31□□□□□ -0.92
CLK3-218ENST00000566926 MRPL23Q16540 153 aaKnown RBP9.31□□□□□ -0.92
CLK3-218ENST00000566926 RNASEKQ6P5S7 137 aaKnown RBP9.31□□□□□ -0.92
CLK3-218ENST00000566926 NIT1Q86X76 327 aa9.31□□□□□ -0.92
CLK3-218ENST00000566926 HIST3H2BBQ8N257 126 aa9.31□□□□□ -0.92
CLK3-218ENST00000566926 ZNRF2Q8NHG8 242 aa9.31□□□□□ -0.92
CLK3-218ENST00000566926 TMEM18Q96B42 140 aa9.31□□□□□ -0.92
CLK3-218ENST00000566926 SMIM2Q9BVW6 85 aa9.31□□□□□ -0.92
CLK3-218ENST00000566926 A0A096LPF7 62 aa9.3□□□□□ -0.92
CLK3-218ENST00000566926 VCYO14598 125 aa9.3□□□□□ -0.92
CLK3-218ENST00000566926 IQCJQ1A5X6 159 aa9.3□□□□□ -0.92
CLK3-218ENST00000566926 Q6ZR54 194 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms