RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 Q9H8V8 135 aa11.23□□□□□ -0.61
SCAMP2-208ENST00000566557 VPS13DQ5THJ4 4388 aa11.23□□□□□ -0.61
SCAMP2-208ENST00000566557 TRBV7-3A0A075B6L6 115 aa11.22□□□□□ -0.61
SCAMP2-208ENST00000566557 OR10J3Q5JRS4 329 aa11.22□□□□□ -0.61
SCAMP2-208ENST00000566557 ANAPC16Q96DE5 110 aa11.22□□□□□ -0.61
SCAMP2-208ENST00000566557 TRAV26-2A0A0B4J265 109 aa11.21□□□□□ -0.61
SCAMP2-208ENST00000566557 SIVA1O15304 175 aa11.21□□□□□ -0.61
SCAMP2-208ENST00000566557 MRPL54Q6P161 138 aaKnown RBP11.21□□□□□ -0.61
SCAMP2-208ENST00000566557 RASL11AQ6T310 242 aa11.21□□□□□ -0.61
SCAMP2-208ENST00000566557 WFDC10BQ8IUB3 73 aa11.21□□□□□ -0.61
SCAMP2-208ENST00000566557 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.21□□□□□ -0.61
SCAMP2-208ENST00000566557 TNFRSF18Q9Y5U5 241 aa11.21□□□□□ -0.61
SCAMP2-208ENST00000566557 TRAV8-6A0A0B4J262 113 aa11.2□□□□□ -0.62
SCAMP2-208ENST00000566557 IGHV3-38A0A0C4DH36 116 aa11.2□□□□□ -0.62
SCAMP2-208ENST00000566557 NBDYA0A0U1RRE5 68 aa11.2□□□□□ -0.62
SCAMP2-208ENST00000566557 M0QY20 66 aa11.2□□□□□ -0.62
SCAMP2-208ENST00000566557 CAMPP49913 170 aa11.2□□□□□ -0.62
SCAMP2-208ENST00000566557 UBE2D3P61077 147 aa11.2□□□□□ -0.62
SCAMP2-208ENST00000566557 UBE2D2P62837 147 aa11.2□□□□□ -0.62
SCAMP2-208ENST00000566557 TIRAPP58753 221 aa11.19□□□□□ -0.62
SCAMP2-208ENST00000566557 TTC32Q5I0X7 151 aa11.19□□□□□ -0.62
SCAMP2-208ENST00000566557 LELP1Q5T871 98 aa11.19□□□□□ -0.62
SCAMP2-208ENST00000566557 TMEM191AQ9H0A3 160 aa11.19□□□□□ -0.62
SCAMP2-208ENST00000566557 AMN1Q8IY45 258 aa11.18□□□□□ -0.62
SCAMP2-208ENST00000566557 GATD1Q8NB37 220 aa11.18□□□□□ -0.62
SCAMP2-208ENST00000566557 DNAJC30Q96LL9 226 aa11.18□□□□□ -0.62
SCAMP2-208ENST00000566557 A0A087WWC5 75 aa11.17□□□□□ -0.62
SCAMP2-208ENST00000566557 A0A1B0GW15 77 aa11.17□□□□□ -0.62
SCAMP2-208ENST00000566557 HBBP68871 147 aa11.17□□□□□ -0.62
SCAMP2-208ENST00000566557 NIT2Q9NQR4 276 aa11.17□□□□□ -0.62
SCAMP2-208ENST00000566557 CARHSP1Q9Y2V2 147 aaKnown RBP11.17□□□□□ -0.62
SCAMP2-208ENST00000566557 S100A8P05109 93 aa11.16□□□□□ -0.62
SCAMP2-208ENST00000566557 NDUFA5Q16718 116 aa11.16□□□□□ -0.62
SCAMP2-208ENST00000566557 RPL39LQ96EH5 51 aaKnown RBP11.16□□□□□ -0.62
SCAMP2-208ENST00000566557 KCNIP4Q6PIL6 250 aa11.15□□□□□ -0.62
SCAMP2-208ENST00000566557 Q6ZR54 194 aa11.15□□□□□ -0.62
SCAMP2-208ENST00000566557 DAZ4Q86SG3 579 aaKnown RBP11.15□□□□□ -0.62
SCAMP2-208ENST00000566557 CTDSP1Q9GZU7 261 aa11.15□□□□□ -0.62
SCAMP2-208ENST00000566557 DAZ3Q9NR90 486 aaKnown RBP11.15□□□□□ -0.62
SCAMP2-208ENST00000566557 NCR2O95944 276 aa11.14□□□□□ -0.63
SCAMP2-208ENST00000566557 IGHV3-30P01768 117 aa11.14□□□□□ -0.63
SCAMP2-208ENST00000566557 IGHV3-33P01772 117 aa11.14□□□□□ -0.63
SCAMP2-208ENST00000566557 APOC3P02656 99 aa11.14□□□□□ -0.63
SCAMP2-208ENST00000566557 IGHV3-30-3P0DP02 117 aa11.14□□□□□ -0.63
SCAMP2-208ENST00000566557 IGHV3-30-5P0DP03 117 aa11.14□□□□□ -0.63
SCAMP2-208ENST00000566557 RAB4AP20338 218 aa11.14□□□□□ -0.63
SCAMP2-208ENST00000566557 C10orf91Q5T1B1 145 aa11.14□□□□□ -0.63
SCAMP2-208ENST00000566557 ATP5L2Q7Z4Y8 100 aa11.14□□□□□ -0.63
SCAMP2-208ENST00000566557 CLRN3Q8NCR9 226 aa11.14□□□□□ -0.63
SCAMP2-208ENST00000566557 RNF185Q96GF1 192 aa11.14□□□□□ -0.63
SCAMP2-208ENST00000566557 KRTAP1-5Q9BYS1 174 aa11.14□□□□□ -0.63
SCAMP2-208ENST00000566557 RPS10P5Q9NQ39 176 aa11.14□□□□□ -0.63
SCAMP2-208ENST00000566557 PKHD1P08F94 4074 aa11.14□□□□□ -0.63
SCAMP2-208ENST00000566557 TRAV9-2A0A087WT02 112 aa11.13□□□□□ -0.63
SCAMP2-208ENST00000566557 A0A1B0GXF2 115 aa11.13□□□□□ -0.63
SCAMP2-208ENST00000566557 SMKR1H3BMG3 65 aa11.13□□□□□ -0.63
SCAMP2-208ENST00000566557 DNAH10OSP0CZ25 163 aa11.13□□□□□ -0.63
SCAMP2-208ENST00000566557 C1orf134Q5TEV5 83 aa11.13□□□□□ -0.63
SCAMP2-208ENST00000566557 DEFB104AQ8WTQ1 72 aa11.13□□□□□ -0.63
SCAMP2-208ENST00000566557 MRAP2Q96G30 205 aa11.13□□□□□ -0.63
SCAMP2-208ENST00000566557 DNAH6Q9C0G6 4158 aa11.12□□□□□ -0.63
SCAMP2-208ENST00000566557 TRBV6-8A0A0A6YYG3 113 aa11.12□□□□□ -0.63
SCAMP2-208ENST00000566557 C7orf77A4D0Y5 90 aa11.12□□□□□ -0.63
SCAMP2-208ENST00000566557 S100PP25815 95 aa11.12□□□□□ -0.63
SCAMP2-208ENST00000566557 RHEBQ15382 184 aa11.12□□□□□ -0.63
SCAMP2-208ENST00000566557 TMEM97Q5BJF2 176 aa11.12□□□□□ -0.63
SCAMP2-208ENST00000566557 FAM104BQ5XKR9 115 aa11.12□□□□□ -0.63
SCAMP2-208ENST00000566557 BTF3L4Q96K17 158 aa11.12□□□□□ -0.63
SCAMP2-208ENST00000566557 URGCP-MRPS24S4R325 110 aa11.12□□□□□ -0.63
SCAMP2-208ENST00000566557 GAS8-AS1O95177 125 aa11.11□□□□□ -0.63
SCAMP2-208ENST00000566557 MRPL51Q4U2R6 128 aaKnown RBP11.11□□□□□ -0.63
SCAMP2-208ENST00000566557 LINC01556Q5JQF7 62 aa11.11□□□□□ -0.63
SCAMP2-208ENST00000566557 C6orf223Q8N319 242 aa11.11□□□□□ -0.63
SCAMP2-208ENST00000566557 FRZBQ92765 325 aa11.11□□□□□ -0.63
SCAMP2-208ENST00000566557 CHCHD5Q9BSY4 110 aa11.11□□□□□ -0.63
SCAMP2-208ENST00000566557 TRBV25-1A0A075B6N4 114 aa11.1□□□□□ -0.63
SCAMP2-208ENST00000566557 COTL1Q14019 142 aa11.1□□□□□ -0.63
SCAMP2-208ENST00000566557 SLC7A5P1Q8MH63 180 aa11.1□□□□□ -0.63
SCAMP2-208ENST00000566557 SVBPQ8N300 66 aa11.1□□□□□ -0.63
SCAMP2-208ENST00000566557 Q8N3U1 123 aa11.1□□□□□ -0.63
SCAMP2-208ENST00000566557 IMMP2LQ96T52 175 aa11.1□□□□□ -0.63
SCAMP2-208ENST00000566557 ST20Q9HBF5 79 aa11.1□□□□□ -0.63
SCAMP2-208ENST00000566557 A0A087WX48 190 aa11.09□□□□□ -0.63
SCAMP2-208ENST00000566557 IGHV1-24A0A0C4DH33 117 aa11.09□□□□□ -0.63
SCAMP2-208ENST00000566557 SDHAF1A6NFY7 115 aa11.09□□□□□ -0.63
SCAMP2-208ENST00000566557 TMEM262E9PQX1 116 aa11.09□□□□□ -0.63
SCAMP2-208ENST00000566557 SNAPINO95295 136 aa11.09□□□□□ -0.63
SCAMP2-208ENST00000566557 CKS2P33552 79 aa11.09□□□□□ -0.63
SCAMP2-208ENST00000566557 RPS10P46783 165 aaKnown RBP11.09□□□□□ -0.63
SCAMP2-208ENST00000566557 NTM-AS1Q6ZSK4 140 aa11.09□□□□□ -0.63
SCAMP2-208ENST00000566557 C10orf126Q8N4M7 172 aa11.09□□□□□ -0.63
SCAMP2-208ENST00000566557 AMTP48728 403 aa11.08□□□□□ -0.64
SCAMP2-208ENST00000566557 NIT1Q86X76 327 aa11.08□□□□□ -0.64
SCAMP2-208ENST00000566557 PMCHP20382 165 aa11.07□□□□□ -0.64
SCAMP2-208ENST00000566557 GAGE6Q13070 117 aa11.07□□□□□ -0.64
SCAMP2-208ENST00000566557 TRAV9-1A0A075B6T8 112 aa11.06□□□□□ -0.64
SCAMP2-208ENST00000566557 TRBV6-5A0A0K0K1A5 114 aa11.06□□□□□ -0.64
SCAMP2-208ENST00000566557 D6R8Y8 96 aa11.06□□□□□ -0.64
SCAMP2-208ENST00000566557 K7EP13 123 aa11.06□□□□□ -0.64
SCAMP2-208ENST00000566557 RTL8CO15255 209 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms