RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 X6R8D5 127 aa6.41□□□□□ -1.38
LSM3P5-201ENST00000566307 JMJD1CQ15652 2540 aa6.4□□□□□ -1.38
LSM3P5-201ENST00000566307 VCYO14598 125 aa6.4□□□□□ -1.38
LSM3P5-201ENST00000566307 LINC01545Q5VT33 79 aa6.4□□□□□ -1.38
LSM3P5-201ENST00000566307 WFDC10AQ9H1F0 79 aa6.4□□□□□ -1.38
LSM3P5-201ENST00000566307 CUBNO60494 3623 aa6.39□□□□□ -1.39
LSM3P5-201ENST00000566307 A0A087WWL8 130 aa6.39□□□□□ -1.39
LSM3P5-201ENST00000566307 PLAC8L1A1L4L8 177 aa6.39□□□□□ -1.39
LSM3P5-201ENST00000566307 ATP5LO75964 103 aa6.39□□□□□ -1.39
LSM3P5-201ENST00000566307 IGHV3-53P01767 116 aa6.39□□□□□ -1.39
LSM3P5-201ENST00000566307 AZU1P20160 251 aa6.39□□□□□ -1.39
LSM3P5-201ENST00000566307 RRN3P1Q2M238 152 aa6.39□□□□□ -1.39
LSM3P5-201ENST00000566307 CFAP126Q5VTH2 177 aa6.39□□□□□ -1.39
LSM3P5-201ENST00000566307 LGALS9CQ6DKI2 356 aa6.39□□□□□ -1.39
LSM3P5-201ENST00000566307 PRIMA1Q86XR5 153 aa6.39□□□□□ -1.39
LSM3P5-201ENST00000566307 SPATA3Q8NHX4 192 aa6.39□□□□□ -1.39
LSM3P5-201ENST00000566307 RPL39LQ96EH5 51 aaKnown RBP6.39□□□□□ -1.39
LSM3P5-201ENST00000566307 DNAJC30Q96LL9 226 aa6.39□□□□□ -1.39
LSM3P5-201ENST00000566307 C18orf15Q96N68 181 aa6.39□□□□□ -1.39
LSM3P5-201ENST00000566307 TRAV4A0A0B4J268 109 aa6.38□□□□□ -1.39
LSM3P5-201ENST00000566307 SDHAF1A6NFY7 115 aa6.38□□□□□ -1.39
LSM3P5-201ENST00000566307 A8MZ25 164 aa6.38□□□□□ -1.39
LSM3P5-201ENST00000566307 F5H697 171 aa6.38□□□□□ -1.39
LSM3P5-201ENST00000566307 TSTD3H0UI37 97 aa6.38□□□□□ -1.39
LSM3P5-201ENST00000566307 RPL35AP18077 110 aaKnown RBP6.38□□□□□ -1.39
LSM3P5-201ENST00000566307 APOC4P55056 127 aa6.38□□□□□ -1.39
LSM3P5-201ENST00000566307 RIPPLY3P57055 190 aa6.38□□□□□ -1.39
LSM3P5-201ENST00000566307 EGFEM1PQ0D2K5 195 aa6.38□□□□□ -1.39
LSM3P5-201ENST00000566307 RHOHQ15669 191 aa6.38□□□□□ -1.39
LSM3P5-201ENST00000566307 ZNF56Q15929 161 aa6.38□□□□□ -1.39
LSM3P5-201ENST00000566307 FAM74A4Q5TZK3 123 aa6.38□□□□□ -1.39
LSM3P5-201ENST00000566307 C12orf54Q6X4T0 127 aa6.38□□□□□ -1.39
LSM3P5-201ENST00000566307 ZNF664Q8N3J9 261 aa6.38□□□□□ -1.39
LSM3P5-201ENST00000566307 LINC00612Q8N6U2 182 aa6.38□□□□□ -1.39
LSM3P5-201ENST00000566307 C3orf56Q8N813 242 aa6.38□□□□□ -1.39
LSM3P5-201ENST00000566307 TOMM6Q96B49 74 aa6.38□□□□□ -1.39
LSM3P5-201ENST00000566307 IFI27L1Q96BM0 104 aa6.38□□□□□ -1.39
LSM3P5-201ENST00000566307 TEP1Q99973 2627 aaKnown RBP6.38□□□□□ -1.39
LSM3P5-201ENST00000566307 NACAE9PAV3 2078 aa6.37□□□□□ -1.39
LSM3P5-201ENST00000566307 TRBV10-1A0A0K0K1A3 114 aa6.37□□□□□ -1.39
LSM3P5-201ENST00000566307 HTN1P15515 57 aa6.37□□□□□ -1.39
LSM3P5-201ENST00000566307 IGLL1P15814 213 aa6.37□□□□□ -1.39
LSM3P5-201ENST00000566307 LINC00173Q6ZV60 143 aa6.37□□□□□ -1.39
LSM3P5-201ENST00000566307 KIR2DL4Q99706 377 aa6.37□□□□□ -1.39
LSM3P5-201ENST00000566307 VAMP8Q9BV40 100 aa6.37□□□□□ -1.39
LSM3P5-201ENST00000566307 MRPL16Q9NX20 251 aaKnown RBP6.37□□□□□ -1.39
LSM3P5-201ENST00000566307 ATRQ13535 2644 aa6.37□□□□□ -1.39
LSM3P5-201ENST00000566307 NOTCH3Q9UM47 2321 aa6.36□□□□□ -1.39
LSM3P5-201ENST00000566307 TRAV9-2A0A087WT02 112 aa6.36□□□□□ -1.39
LSM3P5-201ENST00000566307 TRAV12-1A0A0B4J245 112 aa6.36□□□□□ -1.39
LSM3P5-201ENST00000566307 NPSP0C0P6 89 aa6.36□□□□□ -1.39
LSM3P5-201ENST00000566307 IGHV3OR16-12A0A075B7B8 117 aa6.35□□□□□ -1.39
LSM3P5-201ENST00000566307 TRGV1A0A0A0MS02 117 aa6.35□□□□□ -1.39
LSM3P5-201ENST00000566307 I3L3M4 83 aa6.35□□□□□ -1.39
LSM3P5-201ENST00000566307 NUDT3O95989 172 aa6.35□□□□□ -1.39
LSM3P5-201ENST00000566307 PRM2P04554 102 aa6.35□□□□□ -1.39
LSM3P5-201ENST00000566307 C2orf66Q6UXQ4 117 aa6.35□□□□□ -1.39
LSM3P5-201ENST00000566307 ERASQ7Z444 233 aa6.35□□□□□ -1.39
LSM3P5-201ENST00000566307 OR4C5Q8NGB2 326 aa6.35□□□□□ -1.39
LSM3P5-201ENST00000566307 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.34□□□□□ -1.39
LSM3P5-201ENST00000566307 TMEM141Q96I45 108 aa6.34□□□□□ -1.39
LSM3P5-201ENST00000566307 TIMM17AQ99595 171 aa6.34□□□□□ -1.39
LSM3P5-201ENST00000566307 CYSLTR1Q9Y271 337 aa6.34□□□□□ -1.39
LSM3P5-201ENST00000566307 TRBV6-4A0A1B0GX49 114 aa6.33□□□□□ -1.4
LSM3P5-201ENST00000566307 LYRM9A8MSI8 78 aa6.33□□□□□ -1.4
LSM3P5-201ENST00000566307 TSHBP01222 138 aa6.33□□□□□ -1.4
LSM3P5-201ENST00000566307 DDTP30046 118 aa6.33□□□□□ -1.4
LSM3P5-201ENST00000566307 CRYBA4P53673 196 aa6.33□□□□□ -1.4
LSM3P5-201ENST00000566307 Q6ZTI0 123 aa6.33□□□□□ -1.4
LSM3P5-201ENST00000566307 MRPL52Q86TS9 123 aaKnown RBP6.33□□□□□ -1.4
LSM3P5-201ENST00000566307 NEXN-AS1Q8NBZ9 246 aa6.33□□□□□ -1.4
LSM3P5-201ENST00000566307 NOP10Q9NPE3 64 aaKnown RBP6.33□□□□□ -1.4
LSM3P5-201ENST00000566307 TNFRSF18Q9Y5U5 241 aa6.33□□□□□ -1.4
LSM3P5-201ENST00000566307 A0A087WX48 190 aa6.32□□□□□ -1.4
LSM3P5-201ENST00000566307 IGIPA6NJ69 53 aa6.32□□□□□ -1.4
LSM3P5-201ENST00000566307 PCP4L1A6NKN8 68 aa6.32□□□□□ -1.4
LSM3P5-201ENST00000566307 HSBP1L1C9JCN9 74 aa6.32□□□□□ -1.4
LSM3P5-201ENST00000566307 K7EQD1 137 aa6.32□□□□□ -1.4
LSM3P5-201ENST00000566307 MIFP14174 115 aa6.32□□□□□ -1.4
LSM3P5-201ENST00000566307 SPATA45Q537H7 98 aa6.32□□□□□ -1.4
LSM3P5-201ENST00000566307 Q6ZSN1 163 aa6.32□□□□□ -1.4
LSM3P5-201ENST00000566307 C20orf203Q8NBC4 194 aa6.32□□□□□ -1.4
LSM3P5-201ENST00000566307 RNF183Q96D59 192 aa6.32□□□□□ -1.4
LSM3P5-201ENST00000566307 SCGB3A1Q96QR1 104 aa6.32□□□□□ -1.4
LSM3P5-201ENST00000566307 MIEN1Q9BRT3 115 aa6.32□□□□□ -1.4
LSM3P5-201ENST00000566307 TP53TG1Q9Y2A0 90 aa6.32□□□□□ -1.4
LSM3P5-201ENST00000566307 PAM16Q9Y3D7 125 aa6.32□□□□□ -1.4
LSM3P5-201ENST00000566307 PYGO1Q9Y3Y4 419 aa6.32□□□□□ -1.4
LSM3P5-201ENST00000566307 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.31□□□□□ -1.4
LSM3P5-201ENST00000566307 PRSS1P07477 247 aa6.31□□□□□ -1.4
LSM3P5-201ENST00000566307 IGLC3P0DOY3 106 aa6.31□□□□□ -1.4
LSM3P5-201ENST00000566307 IGHV4-30-4P0DP06 118 aa6.31□□□□□ -1.4
LSM3P5-201ENST00000566307 RPL36AP83881 106 aaKnown RBP6.31□□□□□ -1.4
LSM3P5-201ENST00000566307 Q6ZN92 141 aa6.31□□□□□ -1.4
LSM3P5-201ENST00000566307 RPL36ALQ969Q0 106 aaKnown RBP6.31□□□□□ -1.4
LSM3P5-201ENST00000566307 ZNF479Q96JC4 524 aa6.31□□□□□ -1.4
LSM3P5-201ENST00000566307 KRTAP9-2Q9BYQ4 174 aa6.31□□□□□ -1.4
LSM3P5-201ENST00000566307 PRO1933Q9H354 126 aa6.31□□□□□ -1.4
LSM3P5-201ENST00000566307 UQCR10Q9UDW1 63 aa6.31□□□□□ -1.4
LSM3P5-201ENST00000566307 TRBV7-3A0A075B6L6 115 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms