RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 C3orf56Q8N813 242 aa7.99□□□□□ -1.13
USB1-212ENST00000566082 PIFOQ8TCI5 191 aa7.99□□□□□ -1.13
USB1-212ENST00000566082 TIMM17AQ99595 171 aa7.99□□□□□ -1.13
USB1-212ENST00000566082 TCTEX1D4Q5JR98 221 aa7.98□□□□□ -1.13
USB1-212ENST00000566082 STHQ8IWL8 128 aa7.98□□□□□ -1.13
USB1-212ENST00000566082 CNFNQ9BYD5 112 aa7.98□□□□□ -1.13
USB1-212ENST00000566082 CCDC168Q8NDH2 2452 aa7.98□□□□□ -1.13
USB1-212ENST00000566082 C11orf68Q9H3H3 251 aaKnown RBP7.98□□□□□ -1.13
USB1-212ENST00000566082 USP9XQ93008 2570 aaPredicted RBP7.98□□□□□ -1.13
USB1-212ENST00000566082 CFAP126Q5VTH2 177 aa7.98□□□□□ -1.13
USB1-212ENST00000566082 SMIM20Q8N5G0 67 aa7.98□□□□□ -1.13
USB1-212ENST00000566082 ZFAND2AQ8N6M9 145 aa7.98□□□□□ -1.13
USB1-212ENST00000566082 MAPK1IP1LQ8NDC0 245 aa7.98□□□□□ -1.13
USB1-212ENST00000566082 SIRPDQ9H106 197 aa7.98□□□□□ -1.13
USB1-212ENST00000566082 FRYQ5TBA9 3013 aa7.98□□□□□ -1.13
USB1-212ENST00000566082 CRPP02741 224 aa7.97□□□□□ -1.13
USB1-212ENST00000566082 RPL36AP83881 106 aaKnown RBP7.97□□□□□ -1.13
USB1-212ENST00000566082 CEMP1Q6PRD7 247 aaPredicted RBP7.97□□□□□ -1.13
USB1-212ENST00000566082 RPL36ALQ969Q0 106 aaKnown RBP7.97□□□□□ -1.13
USB1-212ENST00000566082 SPATA25Q9BR10 227 aa7.97□□□□□ -1.13
USB1-212ENST00000566082 XGP55808 180 aa7.97□□□□□ -1.13
USB1-212ENST00000566082 XCL2Q9UBD3 114 aa7.97□□□□□ -1.13
USB1-212ENST00000566082 DSPP15924 2871 aaKnown RBP7.97□□□□□ -1.13
USB1-212ENST00000566082 F8W735 103 aaPredicted RBP7.97□□□□□ -1.13
USB1-212ENST00000566082 RS1O15537 224 aa7.97□□□□□ -1.13
USB1-212ENST00000566082 IGHV4-38-2P0DP08 117 aa7.97□□□□□ -1.13
USB1-212ENST00000566082 C9orf153Q5TBE3 101 aa7.97□□□□□ -1.13
USB1-212ENST00000566082 Q6ZS46 218 aa7.97□□□□□ -1.13
USB1-212ENST00000566082 SLC25A29Q8N8R3 303 aa7.97□□□□□ -1.13
USB1-212ENST00000566082 PEMTQ9UBM1 199 aa7.97□□□□□ -1.13
USB1-212ENST00000566082 PAX4O43316 350 aa7.96□□□□□ -1.13
USB1-212ENST00000566082 IGF2-ASQ6U949 168 aa7.96□□□□□ -1.13
USB1-212ENST00000566082 ZNRF2Q8NHG8 242 aa7.96□□□□□ -1.13
USB1-212ENST00000566082 CLEC2BQ92478 149 aa7.96□□□□□ -1.13
USB1-212ENST00000566082 ZMAT4Q9H898 229 aa7.96□□□□□ -1.13
USB1-212ENST00000566082 PCSK5Q92824 1860 aa7.96□□□□□ -1.14
USB1-212ENST00000566082 RHODO00212 210 aa7.96□□□□□ -1.14
USB1-212ENST00000566082 GNLYP22749 145 aa7.96□□□□□ -1.14
USB1-212ENST00000566082 CHCHD5Q9BSY4 110 aa7.96□□□□□ -1.14
USB1-212ENST00000566082 EDA2RQ9HAV5 297 aa7.96□□□□□ -1.14
USB1-212ENST00000566082 SONP18583 2426 aaKnown RBP7.96□□□□□ -1.14
USB1-212ENST00000566082 B4DSR2 109 aa7.96□□□□□ -1.14
USB1-212ENST00000566082 MSMBP08118 114 aa7.96□□□□□ -1.14
USB1-212ENST00000566082 ICOSQ9Y6W8 199 aa7.96□□□□□ -1.14
USB1-212ENST00000566082 TEX49A0A1B0GTD5 131 aa7.95□□□□□ -1.14
USB1-212ENST00000566082 NOTCH2Q04721 2471 aa7.95□□□□□ -1.14
USB1-212ENST00000566082 IGHV3-30-3P0DP02 117 aa7.95□□□□□ -1.14
USB1-212ENST00000566082 Q9H8V8 135 aa7.95□□□□□ -1.14
USB1-212ENST00000566082 TRGV4A0A0C4DH28 118 aa7.94□□□□□ -1.14
USB1-212ENST00000566082 MED14OSP0DP75 135 aa7.94□□□□□ -1.14
USB1-212ENST00000566082 ADORA2A-AS1P86434 159 aa7.94□□□□□ -1.14
USB1-212ENST00000566082 C20orf203Q8NBC4 194 aa7.94□□□□□ -1.14
USB1-212ENST00000566082 IGHV4-61A0A0C4DH41 118 aa7.94□□□□□ -1.14
USB1-212ENST00000566082 BOD1L1Q8NFC6 3051 aa7.94□□□□□ -1.14
USB1-212ENST00000566082 HIST1H4AP62805 103 aaKnown RBP7.94□□□□□ -1.14
USB1-212ENST00000566082 RBMY1BA6NDE4 496 aaKnown RBP7.93□□□□□ -1.14
USB1-212ENST00000566082 RBMY1EA6NEQ0 496 aaKnown RBP7.93□□□□□ -1.14
USB1-212ENST00000566082 RBMY1DP0C7P1 496 aaKnown RBP7.93□□□□□ -1.14
USB1-212ENST00000566082 RBMY1A1P0DJD3 496 aaKnown RBP7.93□□□□□ -1.14
USB1-212ENST00000566082 RBMY1CP0DJD4 496 aa7.93□□□□□ -1.14
USB1-212ENST00000566082 P0DMU3 169 aa7.93□□□□□ -1.14
USB1-212ENST00000566082 FAM231AP0DMU4 169 aa7.93□□□□□ -1.14
USB1-212ENST00000566082 FAM231CP0DMU5 169 aa7.93□□□□□ -1.14
USB1-212ENST00000566082 EBI3Q14213 229 aa7.93□□□□□ -1.14
USB1-212ENST00000566082 TRBV10-2A0A0K0K1G8 114 aa7.93□□□□□ -1.14
USB1-212ENST00000566082 CLPSL1A2RUU4 121 aa7.93□□□□□ -1.14
USB1-212ENST00000566082 INSP01308 110 aa7.93□□□□□ -1.14
USB1-212ENST00000566082 CHD8Q9HCK8 2581 aa7.93□□□□□ -1.14
USB1-212ENST00000566082 IGHV4-59P01825 116 aa7.93□□□□□ -1.14
USB1-212ENST00000566082 IGHG4P01861 327 aa7.93□□□□□ -1.14
USB1-212ENST00000566082 RNASE3P12724 160 aaKnown RBP7.93□□□□□ -1.14
USB1-212ENST00000566082 PFN2P35080 140 aa7.92□□□□□ -1.14
USB1-212ENST00000566082 NAV2Q8IVL1 2488 aa7.92□□□□□ -1.14
USB1-212ENST00000566082 IGLV2-18A0A075B6J9 118 aa7.92□□□□□ -1.14
USB1-212ENST00000566082 A0A0J9YXY3 114 aa7.92□□□□□ -1.14
USB1-212ENST00000566082 IGHV3-33P01772 117 aa7.92□□□□□ -1.14
USB1-212ENST00000566082 CFHR3Q02985 330 aa7.92□□□□□ -1.14
USB1-212ENST00000566082 DEFB136Q30KP8 78 aa7.92□□□□□ -1.14
USB1-212ENST00000566082 Q8N6K4 173 aa7.92□□□□□ -1.14
USB1-212ENST00000566082 IGHV3-30P01768 117 aa7.92□□□□□ -1.14
USB1-212ENST00000566082 IGHV3-30-5P0DP03 117 aa7.92□□□□□ -1.14
USB1-212ENST00000566082 HIVEP3Q5T1R4 2406 aa7.91□□□□□ -1.14
USB1-212ENST00000566082 ZNF22P17026 224 aaPredicted RBP7.91□□□□□ -1.14
USB1-212ENST00000566082 H3BUA1 57 aa7.91□□□□□ -1.14
USB1-212ENST00000566082 COX8CQ7Z4L0 72 aa7.91□□□□□ -1.14
USB1-212ENST00000566082 HOXD3P31249 432 aaPredicted RBP7.91□□□□□ -1.14
USB1-212ENST00000566082 NDUFV3P56181 108 aaKnown RBP7.91□□□□□ -1.14
USB1-212ENST00000566082 IGHV4-4A0A075B6R2 117 aa7.9□□□□□ -1.14
USB1-212ENST00000566082 COX6B1P14854 86 aa7.9□□□□□ -1.14
USB1-212ENST00000566082 NFE4Q86UQ8 179 aa7.9□□□□□ -1.14
USB1-212ENST00000566082 FAM236AA0A1B0GUQ0 79 aa7.9□□□□□ -1.14
USB1-212ENST00000566082 FAM236BA0A1B0GV22 79 aa7.9□□□□□ -1.14
USB1-212ENST00000566082 LMO4P61968 165 aa7.9□□□□□ -1.14
USB1-212ENST00000566082 MYO18BQ8IUG5 2567 aa7.9□□□□□ -1.14
USB1-212ENST00000566082 BAALC-AS2P0C853 105 aa7.9□□□□□ -1.15
USB1-212ENST00000566082 INAFM2P0DMQ5 153 aa7.9□□□□□ -1.15
USB1-212ENST00000566082 UBE2D1P51668 147 aa7.9□□□□□ -1.15
USB1-212ENST00000566082 C6orf226Q5I0X4 101 aa7.9□□□□□ -1.15
USB1-212ENST00000566082 TRIAP1O43715 76 aa7.89□□□□□ -1.15
USB1-212ENST00000566082 FBXL19-AS1Q494R0 122 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms