RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 SMIM27A0A1W2PRY6 76 aa14.37□□□□□ -0.11
SHCBP1-205ENST00000566016 SUMO4Q6EEV6 95 aa14.37□□□□□ -0.11
SHCBP1-205ENST00000566016 C1orf134Q5TEV5 83 aa14.36□□□□□ -0.11
SHCBP1-205ENST00000566016 NUP35Q8NFH5 326 aa14.36□□□□□ -0.11
SHCBP1-205ENST00000566016 IGHV3-38A0A0C4DH36 116 aa14.35□□□□□ -0.11
SHCBP1-205ENST00000566016 PPP1R2P9O14990 202 aa14.35□□□□□ -0.11
SHCBP1-205ENST00000566016 LINC00336Q6ZUF6 198 aa14.35□□□□□ -0.11
SHCBP1-205ENST00000566016 DNAJC30Q96LL9 226 aa14.35□□□□□ -0.11
SHCBP1-205ENST00000566016 TMEM218A2RU14 115 aa14.34□□□□□ -0.11
SHCBP1-205ENST00000566016 LINC00862A6NCI5 91 aa14.34□□□□□ -0.11
SHCBP1-205ENST00000566016 LINC01556Q5JQF7 62 aa14.34□□□□□ -0.11
SHCBP1-205ENST00000566016 OR10J3Q5JRS4 329 aa14.34□□□□□ -0.11
SHCBP1-205ENST00000566016 FRZBQ92765 325 aa14.34□□□□□ -0.11
SHCBP1-205ENST00000566016 TRAV9-2A0A087WT02 112 aa14.33□□□□□ -0.12
SHCBP1-205ENST00000566016 RTL8CO15255 209 aa14.33□□□□□ -0.12
SHCBP1-205ENST00000566016 RASL11AQ6T310 242 aa14.33□□□□□ -0.12
SHCBP1-205ENST00000566016 COMMD7Q86VX2 200 aa14.33□□□□□ -0.12
SHCBP1-205ENST00000566016 C6orf223Q8N319 242 aa14.33□□□□□ -0.12
SHCBP1-205ENST00000566016 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.33□□□□□ -0.12
SHCBP1-205ENST00000566016 TMEM191AQ9H0A3 160 aa14.33□□□□□ -0.12
SHCBP1-205ENST00000566016 RIGQ13278 110 aa14.32□□□□□ -0.12
SHCBP1-205ENST00000566016 DAZ4Q86SG3 579 aaKnown RBP14.32□□□□□ -0.12
SHCBP1-205ENST00000566016 DAZ3Q9NR90 486 aaKnown RBP14.32□□□□□ -0.12
SHCBP1-205ENST00000566016 ADCYAP1P18509 176 aa14.31□□□□□ -0.12
SHCBP1-205ENST00000566016 C10orf126Q8N4M7 172 aa14.31□□□□□ -0.12
SHCBP1-205ENST00000566016 NIT2Q9NQR4 276 aa14.31□□□□□ -0.12
SHCBP1-205ENST00000566016 ANAPC16Q96DE5 110 aa14.31□□□□□ -0.12
SHCBP1-205ENST00000566016 SEC11CQ9BY50 192 aa14.31□□□□□ -0.12
SHCBP1-205ENST00000566016 TNFRSF18Q9Y5U5 241 aa14.31□□□□□ -0.12
SHCBP1-205ENST00000566016 FAT2Q9NYQ8 4349 aa14.3□□□□□ -0.12
SHCBP1-205ENST00000566016 A0A1B0GW15 77 aa14.3□□□□□ -0.12
SHCBP1-205ENST00000566016 MT-ND4LP03901 98 aa14.3□□□□□ -0.12
SHCBP1-205ENST00000566016 TMEM97Q5BJF2 176 aa14.3□□□□□ -0.12
SHCBP1-205ENST00000566016 GATD1Q8NB37 220 aa14.3□□□□□ -0.12
SHCBP1-205ENST00000566016 F8W036 122 aa14.29□□□□□ -0.12
SHCBP1-205ENST00000566016 TRBV6-8A0A0A6YYG3 113 aa14.28□□□□□ -0.12
SHCBP1-205ENST00000566016 DNAH17Q9UFH2 4485 aa14.27□□□□□ -0.12
SHCBP1-205ENST00000566016 TRAV26-2A0A0B4J265 109 aa14.26□□□□□ -0.13
SHCBP1-205ENST00000566016 EPPK1P58107 5090 aaKnown RBP14.26□□□□□ -0.13
SHCBP1-205ENST00000566016 CHCHD7Q9BUK0 85 aa14.25□□□□□ -0.13
SHCBP1-205ENST00000566016 HECTD4Q9Y4D8 3996 aa14.25□□□□□ -0.13
SHCBP1-205ENST00000566016 S100A8P05109 93 aa14.25□□□□□ -0.13
SHCBP1-205ENST00000566016 ATP5L2Q7Z4Y8 100 aa14.25□□□□□ -0.13
SHCBP1-205ENST00000566016 NIT1Q86X76 327 aa14.25□□□□□ -0.13
SHCBP1-205ENST00000566016 MRAP2Q96G30 205 aa14.25□□□□□ -0.13
SHCBP1-205ENST00000566016 RNF185Q96GF1 192 aa14.25□□□□□ -0.13
SHCBP1-205ENST00000566016 A0A1B0GXF2 115 aa14.24□□□□□ -0.13
SHCBP1-205ENST00000566016 PRSS29PA6NIE9 313 aa14.24□□□□□ -0.13
SHCBP1-205ENST00000566016 RAB4AP20338 218 aa14.24□□□□□ -0.13
SHCBP1-205ENST00000566016 HBBP68871 147 aa14.24□□□□□ -0.13
SHCBP1-205ENST00000566016 LAGE3Q14657 143 aa14.24□□□□□ -0.13
SHCBP1-205ENST00000566016 C10orf91Q5T1B1 145 aa14.24□□□□□ -0.13
SHCBP1-205ENST00000566016 NFE4Q86UQ8 179 aa14.24□□□□□ -0.13
SHCBP1-205ENST00000566016 AMN1Q8IY45 258 aa14.24□□□□□ -0.13
SHCBP1-205ENST00000566016 IBA57-AS1B1ANH7 110 aa14.23□□□□□ -0.13
SHCBP1-205ENST00000566016 KCNIP4Q6PIL6 250 aa14.23□□□□□ -0.13
SHCBP1-205ENST00000566016 NTM-AS1Q6ZSK4 140 aa14.23□□□□□ -0.13
SHCBP1-205ENST00000566016 TRBV6-5A0A0K0K1A5 114 aa14.22□□□□□ -0.13
SHCBP1-205ENST00000566016 PKIAP61925 76 aa14.22□□□□□ -0.13
SHCBP1-205ENST00000566016 IQCJQ1A5X6 159 aa14.22□□□□□ -0.13
SHCBP1-205ENST00000566016 Q6ZRN7 208 aaPredicted RBP14.22□□□□□ -0.13
SHCBP1-205ENST00000566016 CARHSP1Q9Y2V2 147 aaKnown RBP14.22□□□□□ -0.13
SHCBP1-205ENST00000566016 URGCP-MRPS24S4R325 110 aa14.22□□□□□ -0.13
SHCBP1-205ENST00000566016 TRBV25-1A0A075B6N4 114 aa14.21□□□□□ -0.13
SHCBP1-205ENST00000566016 IGHV3-30P01768 117 aa14.21□□□□□ -0.13
SHCBP1-205ENST00000566016 IGHV3-33P01772 117 aa14.21□□□□□ -0.13
SHCBP1-205ENST00000566016 IGHV3-30-3P0DP02 117 aa14.21□□□□□ -0.13
SHCBP1-205ENST00000566016 IGHV3-30-5P0DP03 117 aa14.21□□□□□ -0.13
SHCBP1-205ENST00000566016 CAMPP49913 170 aa14.21□□□□□ -0.13
SHCBP1-205ENST00000566016 RPL39LQ96EH5 51 aaKnown RBP14.21□□□□□ -0.13
SHCBP1-205ENST00000566016 FAM104BQ5XKR9 115 aa14.2□□□□□ -0.14
SHCBP1-205ENST00000566016 MRPL54Q6P161 138 aaKnown RBP14.2□□□□□ -0.14
SHCBP1-205ENST00000566016 IMMP2LQ96T52 175 aa14.2□□□□□ -0.14
SHCBP1-205ENST00000566016 CTDSP1Q9GZU7 261 aa14.2□□□□□ -0.14
SHCBP1-205ENST00000566016 A0A087WX48 190 aa14.19□□□□□ -0.14
SHCBP1-205ENST00000566016 IGHV1-24A0A0C4DH33 117 aa14.19□□□□□ -0.14
SHCBP1-205ENST00000566016 Q8N3U1 123 aa14.19□□□□□ -0.14
SHCBP1-205ENST00000566016 A0A1B0GVY2 172 aa14.18□□□□□ -0.14
SHCBP1-205ENST00000566016 SDHAF1A6NFY7 115 aa14.18□□□□□ -0.14
SHCBP1-205ENST00000566016 PPP1R17O96001 155 aa14.18□□□□□ -0.14
SHCBP1-205ENST00000566016 TNP2Q05952 138 aa14.18□□□□□ -0.14
SHCBP1-205ENST00000566016 COTL1Q14019 142 aa14.18□□□□□ -0.14
SHCBP1-205ENST00000566016 CHCHD5Q9BSY4 110 aa14.18□□□□□ -0.14
SHCBP1-205ENST00000566016 GAS8-AS1O95177 125 aa14.17□□□□□ -0.14
SHCBP1-205ENST00000566016 NCR2O95944 276 aa14.17□□□□□ -0.14
SHCBP1-205ENST00000566016 ELOBQ15370 118 aa14.17□□□□□ -0.14
SHCBP1-205ENST00000566016 BTF3L4Q96K17 158 aa14.17□□□□□ -0.14
SHCBP1-205ENST00000566016 TMEM242Q9NWH2 141 aa14.17□□□□□ -0.14
SHCBP1-205ENST00000566016 PKD1P98161 4303 aa14.16□□□□□ -0.14
SHCBP1-205ENST00000566016 RPS10P46783 165 aaKnown RBP14.16□□□□□ -0.14
SHCBP1-205ENST00000566016 MRPL51Q4U2R6 128 aaKnown RBP14.16□□□□□ -0.14
SHCBP1-205ENST00000566016 ST20Q9HBF5 79 aa14.16□□□□□ -0.14
SHCBP1-205ENST00000566016 PKHD1P08F94 4074 aa14.15□□□□□ -0.14
SHCBP1-205ENST00000566016 TRAV8-3A0A0A6YYJ7 113 aa14.15□□□□□ -0.14
SHCBP1-205ENST00000566016 RHEBQ15382 184 aa14.15□□□□□ -0.14
SHCBP1-205ENST00000566016 TMEM243Q9BU79 118 aa14.15□□□□□ -0.14
SHCBP1-205ENST00000566016 TMEM70Q9BUB7 260 aa14.15□□□□□ -0.14
SHCBP1-205ENST00000566016 MPV17L2Q567V2 206 aa14.14□□□□□ -0.15
SHCBP1-205ENST00000566016 NRACQ8N912 160 aa14.14□□□□□ -0.15
SHCBP1-205ENST00000566016 TRAV9-1A0A075B6T8 112 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms