RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 NEXN-AS1Q8NBZ9 246 aa9.4□□□□□ -0.9
HERPUD1-210ENST00000565966 RPL36ALQ969Q0 106 aaKnown RBP9.4□□□□□ -0.9
HERPUD1-210ENST00000565966 TRBV7-3A0A075B6L6 115 aa9.39□□□□□ -0.91
HERPUD1-210ENST00000565966 IGHV3-38A0A0C4DH36 116 aa9.39□□□□□ -0.91
HERPUD1-210ENST00000565966 HIGD1CA8MV81 97 aa9.39□□□□□ -0.91
HERPUD1-210ENST00000565966 UBE2D3P61077 147 aa9.39□□□□□ -0.91
HERPUD1-210ENST00000565966 UBE2D2P62837 147 aa9.39□□□□□ -0.91
HERPUD1-210ENST00000565966 SUMO4Q6EEV6 95 aa9.39□□□□□ -0.91
HERPUD1-210ENST00000565966 M0QY20 66 aa9.38□□□□□ -0.91
HERPUD1-210ENST00000565966 C10orf126Q8N4M7 172 aa9.38□□□□□ -0.91
HERPUD1-210ENST00000565966 A0A1B0GUT8 65 aa9.37□□□□□ -0.91
HERPUD1-210ENST00000565966 LINC01556Q5JQF7 62 aa9.37□□□□□ -0.91
HERPUD1-210ENST00000565966 NFE4Q86UQ8 179 aa9.37□□□□□ -0.91
HERPUD1-210ENST00000565966 BORCS7Q96B45 105 aa9.37□□□□□ -0.91
HERPUD1-210ENST00000565966 A0A087WWC5 75 aa9.36□□□□□ -0.91
HERPUD1-210ENST00000565966 UQCC3Q6UW78 93 aa9.36□□□□□ -0.91
HERPUD1-210ENST00000565966 NUP35Q8NFH5 326 aa9.36□□□□□ -0.91
HERPUD1-210ENST00000565966 TNFRSF18Q9Y5U5 241 aa9.36□□□□□ -0.91
HERPUD1-210ENST00000565966 SMIM27A0A1W2PRY6 76 aa9.35□□□□□ -0.91
HERPUD1-210ENST00000565966 H7C1H1 209 aa9.35□□□□□ -0.91
HERPUD1-210ENST00000565966 RASL11AQ6T310 242 aa9.35□□□□□ -0.91
HERPUD1-210ENST00000565966 Q6ZRN7 208 aaPredicted RBP9.35□□□□□ -0.91
HERPUD1-210ENST00000565966 SMIM15Q7Z3B0 74 aa9.35□□□□□ -0.91
HERPUD1-210ENST00000565966 DNAJC30Q96LL9 226 aa9.35□□□□□ -0.91
HERPUD1-210ENST00000565966 NAT8BQ9UHF3 227 aa9.35□□□□□ -0.91
HERPUD1-210ENST00000565966 PKHD1P08F94 4074 aa9.35□□□□□ -0.91
HERPUD1-210ENST00000565966 PNRC1Q12796 327 aaPredicted RBP9.34□□□□□ -0.91
HERPUD1-210ENST00000565966 COMMD7Q86VX2 200 aa9.34□□□□□ -0.91
HERPUD1-210ENST00000565966 GATD1Q8NB37 220 aa9.34□□□□□ -0.91
HERPUD1-210ENST00000565966 TRAV26-2A0A0B4J265 109 aa9.33□□□□□ -0.92
HERPUD1-210ENST00000565966 TMEM218A2RU14 115 aa9.33□□□□□ -0.92
HERPUD1-210ENST00000565966 LINC00862A6NCI5 91 aa9.33□□□□□ -0.92
HERPUD1-210ENST00000565966 IGHV3-30P01768 117 aa9.33□□□□□ -0.92
HERPUD1-210ENST00000565966 IGHV3-33P01772 117 aa9.33□□□□□ -0.92
HERPUD1-210ENST00000565966 IGHV3-30-3P0DP02 117 aa9.33□□□□□ -0.92
HERPUD1-210ENST00000565966 IGHV3-30-5P0DP03 117 aa9.33□□□□□ -0.92
HERPUD1-210ENST00000565966 ADCYAP1P18509 176 aa9.33□□□□□ -0.92
HERPUD1-210ENST00000565966 RIGQ13278 110 aa9.33□□□□□ -0.92
HERPUD1-210ENST00000565966 TMEM191AQ9H0A3 160 aa9.33□□□□□ -0.92
HERPUD1-210ENST00000565966 NIT2Q9NQR4 276 aa9.33□□□□□ -0.92
HERPUD1-210ENST00000565966 DNAH11Q96DT5 4516 aa9.33□□□□□ -0.92
HERPUD1-210ENST00000565966 TRBV6-8A0A0A6YYG3 113 aa9.32□□□□□ -0.92
HERPUD1-210ENST00000565966 IBA57-AS1B1ANH7 110 aa9.32□□□□□ -0.92
HERPUD1-210ENST00000565966 PPP1R2P9O14990 202 aa9.32□□□□□ -0.92
HERPUD1-210ENST00000565966 DAZ4Q86SG3 579 aaKnown RBP9.32□□□□□ -0.92
HERPUD1-210ENST00000565966 Q8N3U1 123 aa9.32□□□□□ -0.92
HERPUD1-210ENST00000565966 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.32□□□□□ -0.92
HERPUD1-210ENST00000565966 DAZ3Q9NR90 486 aaKnown RBP9.32□□□□□ -0.92
HERPUD1-210ENST00000565966 NTM-AS1Q6ZSK4 140 aa9.31□□□□□ -0.92
HERPUD1-210ENST00000565966 NIT1Q86X76 327 aa9.31□□□□□ -0.92
HERPUD1-210ENST00000565966 RNF185Q96GF1 192 aa9.31□□□□□ -0.92
HERPUD1-210ENST00000565966 F8W036 122 aa9.3□□□□□ -0.92
HERPUD1-210ENST00000565966 MT-ND4LP03901 98 aa9.3□□□□□ -0.92
HERPUD1-210ENST00000565966 RAB4AP20338 218 aa9.3□□□□□ -0.92
HERPUD1-210ENST00000565966 TMEM97Q5BJF2 176 aa9.3□□□□□ -0.92
HERPUD1-210ENST00000565966 FRZBQ92765 325 aa9.3□□□□□ -0.92
HERPUD1-210ENST00000565966 ANAPC16Q96DE5 110 aa9.3□□□□□ -0.92
HERPUD1-210ENST00000565966 RPL39LQ96EH5 51 aaKnown RBP9.3□□□□□ -0.92
HERPUD1-210ENST00000565966 DYNC1H1Q14204 4646 aaKnown RBP9.3□□□□□ -0.92
HERPUD1-210ENST00000565966 EREGO14944 169 aa9.29□□□□□ -0.92
HERPUD1-210ENST00000565966 LAGE3Q14657 143 aa9.29□□□□□ -0.92
HERPUD1-210ENST00000565966 SPATA12Q7Z6I5 190 aa9.29□□□□□ -0.92
HERPUD1-210ENST00000565966 AMN1Q8IY45 258 aa9.29□□□□□ -0.92
HERPUD1-210ENST00000565966 SEC11CQ9BY50 192 aa9.29□□□□□ -0.92
HERPUD1-210ENST00000565966 URGCP-MRPS24S4R325 110 aa9.29□□□□□ -0.92
HERPUD1-210ENST00000565966 A0A1B0GW15 77 aa9.28□□□□□ -0.92
HERPUD1-210ENST00000565966 GAS8-AS1O95177 125 aa9.28□□□□□ -0.92
HERPUD1-210ENST00000565966 CAMPP49913 170 aa9.28□□□□□ -0.92
HERPUD1-210ENST00000565966 MRPL54Q6P161 138 aaKnown RBP9.28□□□□□ -0.92
HERPUD1-210ENST00000565966 A0A1B0GXF2 115 aa9.27□□□□□ -0.93
HERPUD1-210ENST00000565966 C16orf90A8MZG2 172 aa9.27□□□□□ -0.93
HERPUD1-210ENST00000565966 IQCJQ1A5X6 159 aa9.27□□□□□ -0.93
HERPUD1-210ENST00000565966 KCNIP4Q6PIL6 250 aa9.27□□□□□ -0.93
HERPUD1-210ENST00000565966 MRAP2Q96G30 205 aa9.27□□□□□ -0.93
HERPUD1-210ENST00000565966 CHCHD7Q9BUK0 85 aa9.27□□□□□ -0.93
HERPUD1-210ENST00000565966 Q9HAA7 133 aa9.27□□□□□ -0.93
HERPUD1-210ENST00000565966 TRBV25-1A0A075B6N4 114 aa9.26□□□□□ -0.93
HERPUD1-210ENST00000565966 A0A087WTM6 91 aa9.26□□□□□ -0.93
HERPUD1-210ENST00000565966 A0A087WX48 190 aa9.26□□□□□ -0.93
HERPUD1-210ENST00000565966 TRAV8-3A0A0A6YYJ7 113 aa9.26□□□□□ -0.93
HERPUD1-210ENST00000565966 IGHV1-24A0A0C4DH33 117 aa9.26□□□□□ -0.93
HERPUD1-210ENST00000565966 TRBV6-5A0A0K0K1A5 114 aa9.26□□□□□ -0.93
HERPUD1-210ENST00000565966 PSCAO43653 123 aa9.26□□□□□ -0.93
HERPUD1-210ENST00000565966 HBBP68871 147 aa9.26□□□□□ -0.93
HERPUD1-210ENST00000565966 FAM104BQ5XKR9 115 aa9.26□□□□□ -0.93
HERPUD1-210ENST00000565966 DEFB104AQ8WTQ1 72 aa9.26□□□□□ -0.93
HERPUD1-210ENST00000565966 CHCHD5Q9BSY4 110 aa9.26□□□□□ -0.93
HERPUD1-210ENST00000565966 SDHAF1A6NFY7 115 aa9.25□□□□□ -0.93
HERPUD1-210ENST00000565966 TMEM262E9PQX1 116 aa9.25□□□□□ -0.93
HERPUD1-210ENST00000565966 SMKR1H3BMG3 65 aa9.25□□□□□ -0.93
HERPUD1-210ENST00000565966 S100A8P05109 93 aa9.25□□□□□ -0.93
HERPUD1-210ENST00000565966 RPS10P46783 165 aaKnown RBP9.25□□□□□ -0.93
HERPUD1-210ENST00000565966 KRTAP10-2P60368 255 aa9.25□□□□□ -0.93
HERPUD1-210ENST00000565966 COTL1Q14019 142 aa9.25□□□□□ -0.93
HERPUD1-210ENST00000565966 ELOBQ15370 118 aa9.25□□□□□ -0.93
HERPUD1-210ENST00000565966 C10orf91Q5T1B1 145 aa9.25□□□□□ -0.93
HERPUD1-210ENST00000565966 ATP5L2Q7Z4Y8 100 aa9.25□□□□□ -0.93
HERPUD1-210ENST00000565966 TM2D2Q9BX73 214 aa9.25□□□□□ -0.93
HERPUD1-210ENST00000565966 NCR2O95944 276 aa9.24□□□□□ -0.93
HERPUD1-210ENST00000565966 PKIAP61925 76 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms