RNA–Protein interactions for RNA: ENST00000565931.1

RNF40-207, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-207ENST00000565931 S100A8P05109 93 aa11.49□□□□□ -0.57
RNF40-207ENST00000565931 RAB4AP20338 218 aa11.49□□□□□ -0.57
RNF40-207ENST00000565931 RPL36AP83881 106 aaKnown RBP11.49□□□□□ -0.57
RNF40-207ENST00000565931 RASL11AQ6T310 242 aa11.49□□□□□ -0.57
RNF40-207ENST00000565931 ATP6V0E2Q8NHE4 81 aa11.49□□□□□ -0.57
RNF40-207ENST00000565931 RPL36ALQ969Q0 106 aaKnown RBP11.49□□□□□ -0.57
RNF40-207ENST00000565931 TRBV7-3A0A075B6L6 115 aa11.48□□□□□ -0.57
RNF40-207ENST00000565931 FAM104BQ5XKR9 115 aa11.48□□□□□ -0.57
RNF40-207ENST00000565931 ATRAIDQ6UW56 229 aa11.48□□□□□ -0.57
RNF40-207ENST00000565931 FRZBQ92765 325 aa11.48□□□□□ -0.57
RNF40-207ENST00000565931 TRAV9-1A0A075B6T8 112 aa11.47□□□□□ -0.57
RNF40-207ENST00000565931 TRAV26-2A0A0B4J265 109 aa11.47□□□□□ -0.57
RNF40-207ENST00000565931 S100PP25815 95 aa11.47□□□□□ -0.57
RNF40-207ENST00000565931 TIRAPP58753 221 aa11.47□□□□□ -0.57
RNF40-207ENST00000565931 UBE2D3P61077 147 aa11.47□□□□□ -0.57
RNF40-207ENST00000565931 UBE2D2P62837 147 aa11.47□□□□□ -0.57
RNF40-207ENST00000565931 UBE2DNLQ8IWF7 75 aa11.47□□□□□ -0.57
RNF40-207ENST00000565931 DNAJC30Q96LL9 226 aa11.47□□□□□ -0.57
RNF40-207ENST00000565931 NIT2Q9NQR4 276 aa11.46□□□□□ -0.57
RNF40-207ENST00000565931 MRPS16Q9Y3D3 137 aaKnown RBP11.46□□□□□ -0.57
RNF40-207ENST00000565931 URGCP-MRPS24S4R325 110 aa11.46□□□□□ -0.57
RNF40-207ENST00000565931 VPS13DQ5THJ4 4388 aa11.46□□□□□ -0.58
RNF40-207ENST00000565931 GAS8-AS1O95177 125 aa11.45□□□□□ -0.58
RNF40-207ENST00000565931 MRPL51Q4U2R6 128 aaKnown RBP11.45□□□□□ -0.58
RNF40-207ENST00000565931 MRAP2Q96G30 205 aa11.45□□□□□ -0.58
RNF40-207ENST00000565931 GTSF1LQ9H1H1 148 aa11.45□□□□□ -0.58
RNF40-207ENST00000565931 TNFRSF18Q9Y5U5 241 aa11.45□□□□□ -0.58
RNF40-207ENST00000565931 ALMS1Q8TCU4 4167 aa11.45□□□□□ -0.58
RNF40-207ENST00000565931 DNAH1Q9P2D7 4330 aa11.44□□□□□ -0.58
RNF40-207ENST00000565931 RPL39LQ96EH5 51 aaKnown RBP11.44□□□□□ -0.58
RNF40-207ENST00000565931 UPK3BQ9BT76 320 aa11.44□□□□□ -0.58
RNF40-207ENST00000565931 SACSQ9NZJ4 4579 aa11.44□□□□□ -0.58
RNF40-207ENST00000565931 KMT2CQ8NEZ4 4911 aaKnown RBP11.42□□□□□ -0.58
RNF40-207ENST00000565931 IGHV3-38A0A0C4DH36 116 aa11.42□□□□□ -0.58
RNF40-207ENST00000565931 SMKR1H3BMG3 65 aa11.42□□□□□ -0.58
RNF40-207ENST00000565931 RPS10P46783 165 aaKnown RBP11.42□□□□□ -0.58
RNF40-207ENST00000565931 TRBV6-5A0A0K0K1A5 114 aa11.41□□□□□ -0.58
RNF40-207ENST00000565931 NCR2O95944 276 aa11.41□□□□□ -0.58
RNF40-207ENST00000565931 OR10J3Q5JRS4 329 aa11.41□□□□□ -0.58
RNF40-207ENST00000565931 LELP1Q5T871 98 aa11.41□□□□□ -0.58
RNF40-207ENST00000565931 TMEM136Q6ZRR5 245 aa11.41□□□□□ -0.58
RNF40-207ENST00000565931 DAZ4Q86SG3 579 aaKnown RBP11.41□□□□□ -0.58
RNF40-207ENST00000565931 DAZ3Q9NR90 486 aaKnown RBP11.41□□□□□ -0.58
RNF40-207ENST00000565931 CKS2P33552 79 aa11.4□□□□□ -0.58
RNF40-207ENST00000565931 ELOBQ15370 118 aa11.4□□□□□ -0.58
RNF40-207ENST00000565931 NRACQ8N912 160 aa11.4□□□□□ -0.58
RNF40-207ENST00000565931 Q9H8V8 135 aa11.4□□□□□ -0.58
RNF40-207ENST00000565931 TGIF2-C20orf24A0A0A6YYL0 155 aa11.39□□□□□ -0.59
RNF40-207ENST00000565931 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.39□□□□□ -0.59
RNF40-207ENST00000565931 TRBV24-1A0A075B6N3 115 aa11.38□□□□□ -0.59
RNF40-207ENST00000565931 D6R8Y8 96 aa11.38□□□□□ -0.59
RNF40-207ENST00000565931 PPP1R17O96001 155 aa11.38□□□□□ -0.59
RNF40-207ENST00000565931 PPBPP02775 128 aa11.38□□□□□ -0.59
RNF40-207ENST00000565931 COX19Q49B96 90 aa11.38□□□□□ -0.59
RNF40-207ENST00000565931 NTM-AS1Q6ZSK4 140 aa11.38□□□□□ -0.59
RNF40-207ENST00000565931 WFDC10BQ8IUB3 73 aa11.38□□□□□ -0.59
RNF40-207ENST00000565931 YPEL4Q96NS1 127 aa11.38□□□□□ -0.59
RNF40-207ENST00000565931 ST20Q9HBF5 79 aa11.38□□□□□ -0.59
RNF40-207ENST00000565931 SMCO4Q9NRQ5 59 aa11.38□□□□□ -0.59
RNF40-207ENST00000565931 IGLV2-18A0A075B6J9 118 aa11.37□□□□□ -0.59
RNF40-207ENST00000565931 TRBV6-8A0A0A6YYG3 113 aa11.37□□□□□ -0.59
RNF40-207ENST00000565931 TRAV8-6A0A0B4J262 113 aa11.37□□□□□ -0.59
RNF40-207ENST00000565931 SDHAF1A6NFY7 115 aa11.37□□□□□ -0.59
RNF40-207ENST00000565931 SIVA1O15304 175 aa11.37□□□□□ -0.59
RNF40-207ENST00000565931 POLR2KP53803 58 aaKnown RBP11.37□□□□□ -0.59
RNF40-207ENST00000565931 TMEM97Q5BJF2 176 aa11.37□□□□□ -0.59
RNF40-207ENST00000565931 GNB1LQ9BYB4 327 aa11.37□□□□□ -0.59
RNF40-207ENST00000565931 TNFRSF6BO95407 300 aa11.36□□□□□ -0.59
RNF40-207ENST00000565931 HLA-DQA1P01909 254 aa11.36□□□□□ -0.59
RNF40-207ENST00000565931 CBLN2Q8IUK8 224 aa11.36□□□□□ -0.59
RNF40-207ENST00000565931 ORMDL3Q8N138 153 aa11.36□□□□□ -0.59
RNF40-207ENST00000565931 TMEM70Q9BUB7 260 aa11.36□□□□□ -0.59
RNF40-207ENST00000565931 LYSTQ99698 3801 aa11.35□□□□□ -0.59
RNF40-207ENST00000565931 RYR2Q92736 4967 aa11.35□□□□□ -0.59
RNF40-207ENST00000565931 PHOX2AO14813 284 aa11.35□□□□□ -0.59
RNF40-207ENST00000565931 NPYP01303 97 aa11.35□□□□□ -0.59
RNF40-207ENST00000565931 SUMO2P61956 95 aaKnown RBP11.35□□□□□ -0.59
RNF40-207ENST00000565931 APCSP02743 223 aa11.34□□□□□ -0.59
RNF40-207ENST00000565931 DNAH10OSP0CZ25 163 aa11.34□□□□□ -0.59
RNF40-207ENST00000565931 COTL1Q14019 142 aa11.34□□□□□ -0.59
RNF40-207ENST00000565931 IQCJQ1A5X6 159 aa11.34□□□□□ -0.59
RNF40-207ENST00000565931 DEFB104AQ8WTQ1 72 aa11.34□□□□□ -0.59
RNF40-207ENST00000565931 PRELID3AQ96N28 172 aa11.34□□□□□ -0.59
RNF40-207ENST00000565931 C20orf78Q9BR46 151 aa11.34□□□□□ -0.59
RNF40-207ENST00000565931 TRBV27A0A0K0K1C4 114 aa11.33□□□□□ -0.6
RNF40-207ENST00000565931 NBDYA0A0U1RRE5 68 aa11.33□□□□□ -0.6
RNF40-207ENST00000565931 I3L3M4 83 aa11.33□□□□□ -0.6
RNF40-207ENST00000565931 VCYO14598 125 aa11.33□□□□□ -0.6
RNF40-207ENST00000565931 MT-ND6P03923 174 aa11.33□□□□□ -0.6
RNF40-207ENST00000565931 PMCHP20382 165 aa11.33□□□□□ -0.6
RNF40-207ENST00000565931 KIAA1644Q3SXP7 199 aa11.33□□□□□ -0.6
RNF40-207ENST00000565931 Q6ZR54 194 aa11.33□□□□□ -0.6
RNF40-207ENST00000565931 TRBV25-1A0A075B6N4 114 aa11.32□□□□□ -0.6
RNF40-207ENST00000565931 IGHV1-24A0A0C4DH33 117 aa11.32□□□□□ -0.6
RNF40-207ENST00000565931 M0R2N4 97 aa11.32□□□□□ -0.6
RNF40-207ENST00000565931 RPL32P62910 135 aaKnown RBP11.32□□□□□ -0.6
RNF40-207ENST00000565931 LINC01556Q5JQF7 62 aa11.32□□□□□ -0.6
RNF40-207ENST00000565931 LAMTOR2Q9Y2Q5 125 aa11.32□□□□□ -0.6
RNF40-207ENST00000565931 HYDINQ4G0P3 5121 aa11.31□□□□□ -0.6
RNF40-207ENST00000565931 NIT1Q86X76 327 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms