RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 FAM229AH3BQW9 127 aa10.27□□□□□ -0.77
CDH3-204ENST00000565453 GZMBP10144 247 aa10.27□□□□□ -0.77
CDH3-204ENST00000565453 SSTP61278 116 aa10.27□□□□□ -0.77
CDH3-204ENST00000565453 ENHOQ6UWT2 76 aa10.27□□□□□ -0.77
CDH3-204ENST00000565453 NTM-AS1Q6ZSK4 140 aa10.27□□□□□ -0.77
CDH3-204ENST00000565453 Q8N976 141 aa10.27□□□□□ -0.77
CDH3-204ENST00000565453 SMIM12Q96EX1 92 aa10.27□□□□□ -0.77
CDH3-204ENST00000565453 AP1S3Q96PC3 154 aa10.27□□□□□ -0.77
CDH3-204ENST00000565453 TMEM262E9PQX1 116 aa10.26□□□□□ -0.77
CDH3-204ENST00000565453 F5H697 171 aa10.26□□□□□ -0.77
CDH3-204ENST00000565453 TEX46H3BTG2 121 aa10.26□□□□□ -0.77
CDH3-204ENST00000565453 MEF2BQ02080 365 aaPredicted RBP10.26□□□□□ -0.77
CDH3-204ENST00000565453 Q0VG73 95 aa10.26□□□□□ -0.77
CDH3-204ENST00000565453 MPV17L2Q567V2 206 aa10.26□□□□□ -0.77
CDH3-204ENST00000565453 KCNIP4Q6PIL6 250 aa10.26□□□□□ -0.77
CDH3-204ENST00000565453 OR2D3Q8NGH3 330 aa10.26□□□□□ -0.77
CDH3-204ENST00000565453 TRBV20OR9-2A0A075B6H5 130 aa10.25□□□□□ -0.77
CDH3-204ENST00000565453 PDE6DO43924 150 aa10.25□□□□□ -0.77
CDH3-204ENST00000565453 GNG4P50150 75 aa10.25□□□□□ -0.77
CDH3-204ENST00000565453 RPS20P60866 119 aaKnown RBP10.25□□□□□ -0.77
CDH3-204ENST00000565453 LINC01620Q4KN68 170 aa10.25□□□□□ -0.77
CDH3-204ENST00000565453 FER1L6-AS1Q8NA97 138 aa10.25□□□□□ -0.77
CDH3-204ENST00000565453 M0QY20 66 aa10.24□□□□□ -0.77
CDH3-204ENST00000565453 SMIM17P0DL12 118 aa10.24□□□□□ -0.77
CDH3-204ENST00000565453 BCL2P10415 239 aa10.24□□□□□ -0.77
CDH3-204ENST00000565453 TMEM97Q5BJF2 176 aa10.24□□□□□ -0.77
CDH3-204ENST00000565453 SLC51BQ86UW2 128 aa10.24□□□□□ -0.77
CDH3-204ENST00000565453 C15orf54Q8N8G6 183 aa10.24□□□□□ -0.77
CDH3-204ENST00000565453 DAZAP1Q96EP5 407 aaKnown RBP10.24□□□□□ -0.77
CDH3-204ENST00000565453 CHCHD5Q9BSY4 110 aa10.24□□□□□ -0.77
CDH3-204ENST00000565453 IFNA1P01562 189 aa10.23□□□□□ -0.77
CDH3-204ENST00000565453 CACNG7P62955 275 aa10.23□□□□□ -0.77
CDH3-204ENST00000565453 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.23□□□□□ -0.77
CDH3-204ENST00000565453 TPPP3Q9BW30 176 aa10.23□□□□□ -0.77
CDH3-204ENST00000565453 C1orf43Q9BWL3 253 aa10.23□□□□□ -0.77
CDH3-204ENST00000565453 MED9Q9NWA0 146 aa10.23□□□□□ -0.77
CDH3-204ENST00000565453 ANGP03950 147 aaKnown RBP10.22□□□□□ -0.77
CDH3-204ENST00000565453 MGPP08493 103 aa10.22□□□□□ -0.77
CDH3-204ENST00000565453 PKIAP61925 76 aa10.22□□□□□ -0.77
CDH3-204ENST00000565453 SUMO4Q6EEV6 95 aa10.22□□□□□ -0.77
CDH3-204ENST00000565453 F2Z2F3 143 aa10.21□□□□□ -0.77
CDH3-204ENST00000565453 P01737 135 aa10.21□□□□□ -0.77
CDH3-204ENST00000565453 CRPP02741 224 aa10.21□□□□□ -0.77
CDH3-204ENST00000565453 RBX1P62877 108 aa10.21□□□□□ -0.77
CDH3-204ENST00000565453 IQCJQ1A5X6 159 aa10.21□□□□□ -0.77
CDH3-204ENST00000565453 Q6ZNX1 250 aa10.21□□□□□ -0.77
CDH3-204ENST00000565453 PRR34Q9NV39 138 aa10.21□□□□□ -0.77
CDH3-204ENST00000565453 TRBV25-1A0A075B6N4 114 aa10.2□□□□□ -0.78
CDH3-204ENST00000565453 XKRY2A2RUG3 117 aa10.2□□□□□ -0.78
CDH3-204ENST00000565453 GAGE6Q13070 117 aa10.2□□□□□ -0.78
CDH3-204ENST00000565453 MIAQ16674 131 aa10.2□□□□□ -0.78
CDH3-204ENST00000565453 KRTAP26-1Q6PEX3 210 aa10.2□□□□□ -0.78
CDH3-204ENST00000565453 LYZL1Q6UWQ5 148 aa10.2□□□□□ -0.78
CDH3-204ENST00000565453 SCXQ7RTU7 201 aa10.2□□□□□ -0.78
CDH3-204ENST00000565453 LINC00528Q8N1L1 170 aa10.2□□□□□ -0.78
CDH3-204ENST00000565453 BIN3Q9NQY0 253 aa10.2□□□□□ -0.78
CDH3-204ENST00000565453 SRRM2Q9UQ35 2752 aaKnown RBP10.2□□□□□ -0.78
CDH3-204ENST00000565453 FLG2Q5D862 2391 aaPredicted RBP10.19□□□□□ -0.78
CDH3-204ENST00000565453 MYCBP2O75592 4640 aa10.19□□□□□ -0.78
CDH3-204ENST00000565453 H7C1H1 209 aa10.19□□□□□ -0.78
CDH3-204ENST00000565453 TAGLN2P37802 199 aaKnown RBP10.19□□□□□ -0.78
CDH3-204ENST00000565453 CTRLP40313 264 aa10.19□□□□□ -0.78
CDH3-204ENST00000565453 C14orf177Q52M58 125 aa10.19□□□□□ -0.78
CDH3-204ENST00000565453 C9orf62Q8N4C0 152 aa10.19□□□□□ -0.78
CDH3-204ENST00000565453 NUDT10Q8NFP7 164 aa10.19□□□□□ -0.78
CDH3-204ENST00000565453 NUDT11Q96G61 164 aa10.19□□□□□ -0.78
CDH3-204ENST00000565453 HERC1Q15751 4861 aa10.18□□□□□ -0.78
CDH3-204ENST00000565453 IGHV1-24A0A0C4DH33 117 aa10.18□□□□□ -0.78
CDH3-204ENST00000565453 TRGC1P0CF51 173 aa10.18□□□□□ -0.78
CDH3-204ENST00000565453 WDR73Q6P4I2 378 aa10.18□□□□□ -0.78
CDH3-204ENST00000565453 RASL11AQ6T310 242 aa10.18□□□□□ -0.78
CDH3-204ENST00000565453 CNFNQ9BYD5 112 aa10.18□□□□□ -0.78
CDH3-204ENST00000565453 USP17L23D6RBM5 183 aa10.17□□□□□ -0.78
CDH3-204ENST00000565453 K7EN84 100 aa10.17□□□□□ -0.78
CDH3-204ENST00000565453 NTF3P20783 257 aa10.17□□□□□ -0.78
CDH3-204ENST00000565453 NKX2-5P52952 324 aaPredicted RBP10.17□□□□□ -0.78
CDH3-204ENST00000565453 CLPSL2Q6UWE3 100 aa10.17□□□□□ -0.78
CDH3-204ENST00000565453 LINC00269Q8N2A0 174 aa10.17□□□□□ -0.78
CDH3-204ENST00000565453 CHAC1Q9BUX1 264 aa10.17□□□□□ -0.78
CDH3-204ENST00000565453 DPH3P1Q9H4G8 78 aa10.17□□□□□ -0.78
CDH3-204ENST00000565453 DMBT1Q9UGM3 2413 aaPredicted RBP10.17□□□□□ -0.78
CDH3-204ENST00000565453 HLA-DQA1P01909 254 aa10.16□□□□□ -0.78
CDH3-204ENST00000565453 PLA2G1BP04054 148 aaKnown RBP10.16□□□□□ -0.78
CDH3-204ENST00000565453 OCC1Q8TAD7 63 aa10.16□□□□□ -0.78
CDH3-204ENST00000565453 RNASE7Q9H1E1 156 aaKnown RBP10.16□□□□□ -0.78
CDH3-204ENST00000565453 NIT2Q9NQR4 276 aa10.16□□□□□ -0.78
CDH3-204ENST00000565453 PRSS1P07477 247 aa10.15□□□□□ -0.78
CDH3-204ENST00000565453 KRTAP10-4P60372 401 aaPredicted RBP10.15□□□□□ -0.78
CDH3-204ENST00000565453 C20orf203Q8NBC4 194 aa10.15□□□□□ -0.78
CDH3-204ENST00000565453 CIRBP-AS1Q8TBR5 109 aa10.15□□□□□ -0.78
CDH3-204ENST00000565453 PGLYRP4Q96LB8 373 aa10.15□□□□□ -0.78
CDH3-204ENST00000565453 RPP21Q9H633 154 aaKnown RBP10.15□□□□□ -0.78
CDH3-204ENST00000565453 A0A1B0GUV1 79 aa10.14□□□□□ -0.79
CDH3-204ENST00000565453 REG3AQ06141 175 aa10.14□□□□□ -0.79
CDH3-204ENST00000565453 TMEM243Q9BU79 118 aa10.14□□□□□ -0.79
CDH3-204ENST00000565453 IGLV4-60A0A075B6I1 120 aa10.13□□□□□ -0.79
CDH3-204ENST00000565453 TWIST1Q15672 202 aa10.13□□□□□ -0.79
CDH3-204ENST00000565453 AKAP14Q86UN6 197 aa10.13□□□□□ -0.79
CDH3-204ENST00000565453 LYPD6BQ8NI32 183 aa10.13□□□□□ -0.79
CDH3-204ENST00000565453 GTSF1Q8WW33 167 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms