RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 NIT2Q9NQR4 276 aa10.94□□□□□ -0.66
RAB40C-208ENST00000564703 ALMS1Q8TCU4 4167 aa10.93□□□□□ -0.66
RAB40C-208ENST00000564703 IGHV3-38A0A0C4DH36 116 aa10.93□□□□□ -0.66
RAB40C-208ENST00000564703 A0A1B0GW15 77 aa10.93□□□□□ -0.66
RAB40C-208ENST00000564703 K7EP13 123 aa10.93□□□□□ -0.66
RAB40C-208ENST00000564703 S100A8P05109 93 aa10.93□□□□□ -0.66
RAB40C-208ENST00000564703 LINC00694P0DN24 101 aa10.93□□□□□ -0.66
RAB40C-208ENST00000564703 TMEM97Q5BJF2 176 aa10.93□□□□□ -0.66
RAB40C-208ENST00000564703 DAZ4Q86SG3 579 aaKnown RBP10.93□□□□□ -0.66
RAB40C-208ENST00000564703 WFDC10BQ8IUB3 73 aa10.93□□□□□ -0.66
RAB40C-208ENST00000564703 TMEM191AQ9H0A3 160 aa10.93□□□□□ -0.66
RAB40C-208ENST00000564703 DAZ3Q9NR90 486 aaKnown RBP10.93□□□□□ -0.66
RAB40C-208ENST00000564703 FRZBQ92765 325 aa10.92□□□□□ -0.66
RAB40C-208ENST00000564703 CAMPP49913 170 aa10.91□□□□□ -0.66
RAB40C-208ENST00000564703 KCNIP4Q6PIL6 250 aa10.91□□□□□ -0.66
RAB40C-208ENST00000564703 URGCP-MRPS24S4R325 110 aa10.91□□□□□ -0.66
RAB40C-208ENST00000564703 LYSTQ99698 3801 aa10.9□□□□□ -0.66
RAB40C-208ENST00000564703 DNAH10OSP0CZ25 163 aa10.9□□□□□ -0.66
RAB40C-208ENST00000564703 ADCYAP1P18509 176 aa10.9□□□□□ -0.66
RAB40C-208ENST00000564703 C6orf223Q8N319 242 aa10.9□□□□□ -0.66
RAB40C-208ENST00000564703 C10orf126Q8N4M7 172 aa10.9□□□□□ -0.66
RAB40C-208ENST00000564703 GATD1Q8NB37 220 aa10.9□□□□□ -0.66
RAB40C-208ENST00000564703 RYR2Q92736 4967 aa10.89□□□□□ -0.67
RAB40C-208ENST00000564703 TRAV26-2A0A0B4J265 109 aa10.89□□□□□ -0.67
RAB40C-208ENST00000564703 BTF3P20290 206 aaKnown RBP10.89□□□□□ -0.67
RAB40C-208ENST00000564703 MRPL54Q6P161 138 aaKnown RBP10.89□□□□□ -0.67
RAB40C-208ENST00000564703 LINC00336Q6ZUF6 198 aa10.89□□□□□ -0.67
RAB40C-208ENST00000564703 CTDSP1Q9GZU7 261 aa10.89□□□□□ -0.67
RAB40C-208ENST00000564703 HYDINQ4G0P3 5121 aa10.88□□□□□ -0.67
RAB40C-208ENST00000564703 TRBV6-8A0A0A6YYG3 113 aa10.88□□□□□ -0.67
RAB40C-208ENST00000564703 IGHV3-30P01768 117 aa10.88□□□□□ -0.67
RAB40C-208ENST00000564703 IGHV3-33P01772 117 aa10.88□□□□□ -0.67
RAB40C-208ENST00000564703 IGHV3-30-3P0DP02 117 aa10.88□□□□□ -0.67
RAB40C-208ENST00000564703 IGHV3-30-5P0DP03 117 aa10.88□□□□□ -0.67
RAB40C-208ENST00000564703 RAB4AP20338 218 aa10.88□□□□□ -0.67
RAB40C-208ENST00000564703 HBBP68871 147 aa10.88□□□□□ -0.67
RAB40C-208ENST00000564703 LINC01556Q5JQF7 62 aa10.88□□□□□ -0.67
RAB40C-208ENST00000564703 AMN1Q8IY45 258 aa10.88□□□□□ -0.67
RAB40C-208ENST00000564703 MRAP2Q96G30 205 aa10.88□□□□□ -0.67
RAB40C-208ENST00000564703 A0A087WX48 190 aa10.87□□□□□ -0.67
RAB40C-208ENST00000564703 TMEM262E9PQX1 116 aa10.87□□□□□ -0.67
RAB40C-208ENST00000564703 PPP1R17O96001 155 aa10.87□□□□□ -0.67
RAB40C-208ENST00000564703 NDUFA5Q16718 116 aa10.87□□□□□ -0.67
RAB40C-208ENST00000564703 ATP5L2Q7Z4Y8 100 aa10.87□□□□□ -0.67
RAB40C-208ENST00000564703 SACSQ9NZJ4 4579 aa10.87□□□□□ -0.67
RAB40C-208ENST00000564703 DNAH1Q9P2D7 4330 aa10.87□□□□□ -0.67
RAB40C-208ENST00000564703 TRBV25-1A0A075B6N4 114 aa10.86□□□□□ -0.67
RAB40C-208ENST00000564703 IMMP2LQ96T52 175 aa10.86□□□□□ -0.67
RAB40C-208ENST00000564703 CHCHD5Q9BSY4 110 aa10.86□□□□□ -0.67
RAB40C-208ENST00000564703 RYR3Q15413 4870 aa10.85□□□□□ -0.67
RAB40C-208ENST00000564703 PKIAP61925 76 aa10.85□□□□□ -0.67
RAB40C-208ENST00000564703 COTL1Q14019 142 aa10.85□□□□□ -0.67
RAB40C-208ENST00000564703 C10orf91Q5T1B1 145 aa10.85□□□□□ -0.67
RAB40C-208ENST00000564703 FAM104BQ5XKR9 115 aa10.85□□□□□ -0.67
RAB40C-208ENST00000564703 NFE4Q86UQ8 179 aa10.85□□□□□ -0.67
RAB40C-208ENST00000564703 RPL39LQ96EH5 51 aaKnown RBP10.85□□□□□ -0.67
RAB40C-208ENST00000564703 RNF185Q96GF1 192 aa10.85□□□□□ -0.67
RAB40C-208ENST00000564703 BTF3L4Q96K17 158 aa10.85□□□□□ -0.67
RAB40C-208ENST00000564703 KRTAP1-5Q9BYS1 174 aa10.85□□□□□ -0.67
RAB40C-208ENST00000564703 ST20Q9HBF5 79 aa10.85□□□□□ -0.67
RAB40C-208ENST00000564703 CARHSP1Q9Y2V2 147 aaKnown RBP10.85□□□□□ -0.67
RAB40C-208ENST00000564703 VPS13DQ5THJ4 4388 aa10.85□□□□□ -0.67
RAB40C-208ENST00000564703 IGHV1-24A0A0C4DH33 117 aa10.84□□□□□ -0.67
RAB40C-208ENST00000564703 RTL8CO15255 209 aa10.84□□□□□ -0.67
RAB40C-208ENST00000564703 PMCHP20382 165 aa10.84□□□□□ -0.67
RAB40C-208ENST00000564703 S100PP25815 95 aa10.84□□□□□ -0.67
RAB40C-208ENST00000564703 ELOBQ15370 118 aa10.84□□□□□ -0.67
RAB40C-208ENST00000564703 NIT1Q86X76 327 aa10.84□□□□□ -0.67
RAB40C-208ENST00000564703 C7orf77A4D0Y5 90 aa10.83□□□□□ -0.68
RAB40C-208ENST00000564703 PRSS29PA6NIE9 313 aa10.83□□□□□ -0.68
RAB40C-208ENST00000564703 APOC3P02656 99 aa10.83□□□□□ -0.68
RAB40C-208ENST00000564703 CKS2P33552 79 aa10.83□□□□□ -0.68
RAB40C-208ENST00000564703 NTM-AS1Q6ZSK4 140 aa10.83□□□□□ -0.68
RAB40C-208ENST00000564703 CLRN3Q8NCR9 226 aa10.83□□□□□ -0.68
RAB40C-208ENST00000564703 CHCHD7Q9BUK0 85 aa10.83□□□□□ -0.68
RAB40C-208ENST00000564703 RPS10P5Q9NQ39 176 aa10.83□□□□□ -0.68
RAB40C-208ENST00000564703 TMEM242Q9NWH2 141 aa10.83□□□□□ -0.68
RAB40C-208ENST00000564703 TRBV6-5A0A0K0K1A5 114 aa10.82□□□□□ -0.68
RAB40C-208ENST00000564703 A0A1B0GXF2 115 aa10.82□□□□□ -0.68
RAB40C-208ENST00000564703 SDHAF1A6NFY7 115 aa10.82□□□□□ -0.68
RAB40C-208ENST00000564703 IBA57-AS1B1ANH7 110 aa10.82□□□□□ -0.68
RAB40C-208ENST00000564703 RHEBQ15382 184 aa10.82□□□□□ -0.68
RAB40C-208ENST00000564703 IQCJQ1A5X6 159 aa10.82□□□□□ -0.68
RAB40C-208ENST00000564703 MRPL51Q4U2R6 128 aaKnown RBP10.82□□□□□ -0.68
RAB40C-208ENST00000564703 I3L3M4 83 aa10.81□□□□□ -0.68
RAB40C-208ENST00000564703 AMTP48728 403 aa10.81□□□□□ -0.68
RAB40C-208ENST00000564703 TMEM243Q9BU79 118 aa10.81□□□□□ -0.68
RAB40C-208ENST00000564703 TRAV9-1A0A075B6T8 112 aa10.8□□□□□ -0.68
RAB40C-208ENST00000564703 SMKR1H3BMG3 65 aa10.8□□□□□ -0.68
RAB40C-208ENST00000564703 VCYO14598 125 aa10.8□□□□□ -0.68
RAB40C-208ENST00000564703 UBE2L6O14933 153 aa10.8□□□□□ -0.68
RAB40C-208ENST00000564703 SNAPINO95295 136 aa10.8□□□□□ -0.68
RAB40C-208ENST00000564703 NCR2O95944 276 aa10.8□□□□□ -0.68
RAB40C-208ENST00000564703 PPBPP02775 128 aa10.8□□□□□ -0.68
RAB40C-208ENST00000564703 SVBPQ8N300 66 aa10.8□□□□□ -0.68
RAB40C-208ENST00000564703 DEFB104AQ8WTQ1 72 aa10.8□□□□□ -0.68
RAB40C-208ENST00000564703 TRAV8-3A0A0A6YYJ7 113 aa10.79□□□□□ -0.68
RAB40C-208ENST00000564703 GAS8-AS1O95177 125 aa10.79□□□□□ -0.68
RAB40C-208ENST00000564703 GAGE6Q13070 117 aa10.79□□□□□ -0.68
RAB40C-208ENST00000564703 Q9HAA7 133 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms