RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 A0A1B0GX51 115 aa13.27□□□□□ -0.29
GDE1-203ENST00000564172 GATD1Q8NB37 220 aa13.27□□□□□ -0.29
GDE1-203ENST00000564172 KRTAP10-3P60369 221 aa13.26□□□□□ -0.29
GDE1-203ENST00000564172 C20orf173Q96LM9 149 aa13.26□□□□□ -0.29
GDE1-203ENST00000564172 LINC01587Q99440 93 aa13.26□□□□□ -0.29
GDE1-203ENST00000564172 ASCL2Q99929 193 aa13.26□□□□□ -0.29
GDE1-203ENST00000564172 RPP21Q9H633 154 aaKnown RBP13.26□□□□□ -0.29
GDE1-203ENST00000564172 A0A096LNJ9 63 aa13.25□□□□□ -0.29
GDE1-203ENST00000564172 LYRM7Q5U5X0 104 aa13.25□□□□□ -0.29
GDE1-203ENST00000564172 PRSS3P2Q8NHM4 247 aa13.25□□□□□ -0.29
GDE1-203ENST00000564172 DCANP1Q8TF63 244 aa13.25□□□□□ -0.29
GDE1-203ENST00000564172 ADARB2-AS1A8MUL3 147 aa13.25□□□□□ -0.29
GDE1-203ENST00000564172 ZMAT4Q9H898 229 aa13.25□□□□□ -0.29
GDE1-203ENST00000564172 JMJD1CQ15652 2540 aa13.25□□□□□ -0.29
GDE1-203ENST00000564172 RBAKDNA6NC62 111 aa13.24□□□□□ -0.29
GDE1-203ENST00000564172 RPS28P62857 69 aaKnown RBP13.24□□□□□ -0.29
GDE1-203ENST00000564172 OR13C6PQ8NH95 151 aa13.24□□□□□ -0.29
GDE1-203ENST00000564172 LINC00322Q6ZN03 302 aaPredicted RBP13.24□□□□□ -0.29
GDE1-203ENST00000564172 ZNF492Q9P255 531 aa13.24□□□□□ -0.29
GDE1-203ENST00000564172 TRAV4A0A0B4J268 109 aa13.23□□□□□ -0.29
GDE1-203ENST00000564172 J3KT08 172 aa13.23□□□□□ -0.29
GDE1-203ENST00000564172 ERCC8Q13216 396 aa13.23□□□□□ -0.29
GDE1-203ENST00000564172 WFDC3Q8IUB2 231 aa13.23□□□□□ -0.29
GDE1-203ENST00000564172 TIMM8BQ9Y5J9 83 aaPredicted RBP13.23□□□□□ -0.29
GDE1-203ENST00000564172 PRR25Q96S07 402 aa13.23□□□□□ -0.29
GDE1-203ENST00000564172 NIPBLQ6KC79 2804 aaeCLIP13.22□□□□□ -0.29
GDE1-203ENST00000564172 NSUN5P1Q3KNT7 163 aa13.22□□□□□ -0.29
GDE1-203ENST00000564172 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.22□□□□□ -0.29
GDE1-203ENST00000564172 Q8TAT8 98 aa13.22□□□□□ -0.29
GDE1-203ENST00000564172 IFI27L1Q96BM0 104 aa13.22□□□□□ -0.29
GDE1-203ENST00000564172 F8WDY8 70 aa13.21□□□□□ -0.29
GDE1-203ENST00000564172 MRPL23Q16540 153 aaKnown RBP13.21□□□□□ -0.29
GDE1-203ENST00000564172 MRAPQ8TCY5 172 aa13.21□□□□□ -0.29
GDE1-203ENST00000564172 C8orf49Q96NF6 230 aa13.21□□□□□ -0.29
GDE1-203ENST00000564172 AGPAT4-IT1Q9H0P7 198 aa13.21□□□□□ -0.29
GDE1-203ENST00000564172 WNK1Q9H4A3 2382 aa13.21□□□□□ -0.29
GDE1-203ENST00000564172 A8MWV9 139 aa13.21□□□□□ -0.29
GDE1-203ENST00000564172 LINC00694P0DN24 101 aa13.21□□□□□ -0.29
GDE1-203ENST00000564172 MORN3Q6PF18 240 aaPredicted RBP13.21□□□□□ -0.29
GDE1-203ENST00000564172 SPANXDQ9BXN6 97 aa13.21□□□□□ -0.29
GDE1-203ENST00000564172 HHLA3Q9XRX5 114 aa13.21□□□□□ -0.29
GDE1-203ENST00000564172 C19orf71A6NCJ1 209 aa13.2□□□□□ -0.3
GDE1-203ENST00000564172 K7EQG2 157 aa13.2□□□□□ -0.3
GDE1-203ENST00000564172 HBDP02042 147 aa13.2□□□□□ -0.3
GDE1-203ENST00000564172 LINC01559Q495D7 138 aa13.2□□□□□ -0.3
GDE1-203ENST00000564172 C9orf47Q6ZRZ4 202 aa13.2□□□□□ -0.3
GDE1-203ENST00000564172 NDUFA11Q86Y39 141 aa13.2□□□□□ -0.3
GDE1-203ENST00000564172 PGLYRP4Q96LB8 373 aa13.2□□□□□ -0.3
GDE1-203ENST00000564172 OVOL1O14753 267 aa13.2□□□□□ -0.3
GDE1-203ENST00000564172 COX8CQ7Z4L0 72 aa13.2□□□□□ -0.3
GDE1-203ENST00000564172 FAM19A5Q7Z5A7 132 aaPredicted RBP13.2□□□□□ -0.3
GDE1-203ENST00000564172 IGKV2D-26A0A0A0MRZ7 120 aa13.19□□□□□ -0.3
GDE1-203ENST00000564172 CRIP1P50238 77 aa13.19□□□□□ -0.3
GDE1-203ENST00000564172 DEFB1P60022 68 aa13.19□□□□□ -0.3
GDE1-203ENST00000564172 TEP1Q99973 2627 aaKnown RBP13.19□□□□□ -0.3
GDE1-203ENST00000564172 DEFB114Q30KQ6 69 aa13.18□□□□□ -0.3
GDE1-203ENST00000564172 DYNLRB2Q8TF09 96 aa13.18□□□□□ -0.3
GDE1-203ENST00000564172 C9JAW5 83 aa13.17□□□□□ -0.3
GDE1-203ENST00000564172 P01737 135 aa13.17□□□□□ -0.3
GDE1-203ENST00000564172 UBE2D3P61077 147 aa13.17□□□□□ -0.3
GDE1-203ENST00000564172 UBE2D2P62837 147 aa13.17□□□□□ -0.3
GDE1-203ENST00000564172 TMEM61Q8N0U2 210 aa13.17□□□□□ -0.3
GDE1-203ENST00000564172 TRBV7-3A0A075B6L6 115 aa13.17□□□□□ -0.3
GDE1-203ENST00000564172 F6UB75 175 aa13.17□□□□□ -0.3
GDE1-203ENST00000564172 SNRPD3P62318 126 aaKnown RBP13.17□□□□□ -0.3
GDE1-203ENST00000564172 LINC00477Q96M19 166 aa13.16□□□□□ -0.3
GDE1-203ENST00000564172 DUSP14O95147 198 aaKnown RBP13.16□□□□□ -0.3
GDE1-203ENST00000564172 TMEM101Q96IK0 257 aa13.16□□□□□ -0.3
GDE1-203ENST00000564172 MYMXA0A1B0GTQ4 84 aa13.15□□□□□ -0.3
GDE1-203ENST00000564172 HIST1H4GQ99525 98 aa13.15□□□□□ -0.3
GDE1-203ENST00000564172 DKK2Q9UBU2 259 aa13.15□□□□□ -0.3
GDE1-203ENST00000564172 SORL1Q92673 2214 aa13.15□□□□□ -0.3
GDE1-203ENST00000564172 SCGB1C2P0DMR2 95 aa13.15□□□□□ -0.31
GDE1-203ENST00000564172 IFI27P40305 119 aaPredicted RBP13.15□□□□□ -0.31
GDE1-203ENST00000564172 PSMB2P49721 201 aa13.15□□□□□ -0.31
GDE1-203ENST00000564172 ZNF80P51504 273 aaPredicted RBP13.15□□□□□ -0.31
GDE1-203ENST00000564172 RIGQ13278 110 aa13.15□□□□□ -0.31
GDE1-203ENST00000564172 PRADC1Q9BSG0 188 aa13.14□□□□□ -0.31
GDE1-203ENST00000564172 LENEPQ9Y5L5 61 aa13.14□□□□□ -0.31
GDE1-203ENST00000564172 TRAV2A0A0B4J234 112 aa13.13□□□□□ -0.31
GDE1-203ENST00000564172 F5H768 121 aa13.13□□□□□ -0.31
GDE1-203ENST00000564172 ANKRD29Q8N6D5 301 aa13.13□□□□□ -0.31
GDE1-203ENST00000564172 BAALCQ8WXS3 180 aa13.13□□□□□ -0.31
GDE1-203ENST00000564172 U3KQK5 164 aa13.13□□□□□ -0.31
GDE1-203ENST00000564172 SH2D1AO60880 128 aa13.13□□□□□ -0.31
GDE1-203ENST00000564172 IGKCP01834 107 aa13.13□□□□□ -0.31
GDE1-203ENST00000564172 ZNRF2Q8NHG8 242 aa13.13□□□□□ -0.31
GDE1-203ENST00000564172 A0A1B0GUT8 65 aa13.12□□□□□ -0.31
GDE1-203ENST00000564172 M0R2P5 195 aa13.12□□□□□ -0.31
GDE1-203ENST00000564172 LOC107984640A0A0U1RRK4 108 aa13.11□□□□□ -0.31
GDE1-203ENST00000564172 NPYP01303 97 aa13.11□□□□□ -0.31
GDE1-203ENST00000564172 LINC01600Q96MT4 127 aa13.11□□□□□ -0.31
GDE1-203ENST00000564172 PF4P02776 101 aa13.11□□□□□ -0.31
GDE1-203ENST00000564172 ZNF493Q6ZR52 646 aa13.11□□□□□ -0.31
GDE1-203ENST00000564172 FAM19A4Q96LR4 140 aa13.11□□□□□ -0.31
GDE1-203ENST00000564172 A0A0J9YX75 114 aa13.1□□□□□ -0.31
GDE1-203ENST00000564172 ZFAND2AQ8N6M9 145 aa13.1□□□□□ -0.31
GDE1-203ENST00000564172 TTTY13Q9BZ97 58 aa13.1□□□□□ -0.31
GDE1-203ENST00000564172 ZNF256Q9Y2P7 627 aaPredicted RBP13.1□□□□□ -0.31
GDE1-203ENST00000564172 K7EMI3 77 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms