RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 TSKUQ8WUA8 353 aa10.69□□□□□ -0.7
RNF40-205ENST00000563909 MSRB1Q9NZV6 116 aa10.69□□□□□ -0.7
RNF40-205ENST00000563909 PRO0255Q9UI72 69 aa10.69□□□□□ -0.7
RNF40-205ENST00000563909 V9GYV3 84 aa10.69□□□□□ -0.7
RNF40-205ENST00000563909 FAM231BA6NCW3 169 aa10.68□□□□□ -0.7
RNF40-205ENST00000563909 FOXA3P55318 350 aaPredicted RBP10.68□□□□□ -0.7
RNF40-205ENST00000563909 ZFP2Q6ZN57 461 aa10.68□□□□□ -0.7
RNF40-205ENST00000563909 SEC11CQ9BY50 192 aa10.68□□□□□ -0.7
RNF40-205ENST00000563909 GFRA4Q9GZZ7 299 aa10.68□□□□□ -0.7
RNF40-205ENST00000563909 HHLA3Q9XRX5 114 aa10.68□□□□□ -0.7
RNF40-205ENST00000563909 MUC21A0A0G2JKD1 596 aa10.67□□□□□ -0.7
RNF40-205ENST00000563909 MUC21A0A140T8X8 626 aa10.67□□□□□ -0.7
RNF40-205ENST00000563909 RHODO00212 210 aa10.67□□□□□ -0.7
RNF40-205ENST00000563909 CTRLP40313 264 aa10.67□□□□□ -0.7
RNF40-205ENST00000563909 SSTP61278 116 aa10.67□□□□□ -0.7
RNF40-205ENST00000563909 PPP1R2P9O14990 202 aa10.66□□□□□ -0.7
RNF40-205ENST00000563909 PAX4O43316 350 aa10.66□□□□□ -0.7
RNF40-205ENST00000563909 ADCYAP1P18509 176 aa10.66□□□□□ -0.7
RNF40-205ENST00000563909 CRYBA4P53673 196 aa10.66□□□□□ -0.7
RNF40-205ENST00000563909 GTSF1Q8WW33 167 aa10.66□□□□□ -0.7
RNF40-205ENST00000563909 BORCS7Q96B45 105 aa10.66□□□□□ -0.7
RNF40-205ENST00000563909 JPT2Q9H910 190 aa10.66□□□□□ -0.7
RNF40-205ENST00000563909 IGHV3-73A0A0B4J1V6 119 aa10.65□□□□□ -0.7
RNF40-205ENST00000563909 MT-ND4LP03901 98 aa10.65□□□□□ -0.7
RNF40-205ENST00000563909 CRYGDP07320 174 aa10.65□□□□□ -0.7
RNF40-205ENST00000563909 GATA1P15976 413 aaPredicted RBP10.65□□□□□ -0.7
RNF40-205ENST00000563909 PGLYRP4Q96LB8 373 aa10.65□□□□□ -0.7
RNF40-205ENST00000563909 AP1S3Q96PC3 154 aa10.65□□□□□ -0.7
RNF40-205ENST00000563909 CNFNQ9BYD5 112 aa10.65□□□□□ -0.7
RNF40-205ENST00000563909 SAMD10Q9BYL1 202 aa10.65□□□□□ -0.7
RNF40-205ENST00000563909 ICOSQ9Y6W8 199 aa10.65□□□□□ -0.7
RNF40-205ENST00000563909 TRBV6-4A0A1B0GX49 114 aa10.64□□□□□ -0.71
RNF40-205ENST00000563909 HIGD1CA8MV81 97 aa10.64□□□□□ -0.71
RNF40-205ENST00000563909 TRGC1P0CF51 173 aa10.64□□□□□ -0.71
RNF40-205ENST00000563909 SMIM17P0DL12 118 aa10.64□□□□□ -0.71
RNF40-205ENST00000563909 NTF3P20783 257 aa10.64□□□□□ -0.71
RNF40-205ENST00000563909 KRTAP10-4P60372 401 aaPredicted RBP10.64□□□□□ -0.71
RNF40-205ENST00000563909 FAM74A4Q5TZK3 123 aa10.64□□□□□ -0.71
RNF40-205ENST00000563909 UFSP1Q6NVU6 142 aa10.64□□□□□ -0.71
RNF40-205ENST00000563909 ANAPC16Q96DE5 110 aa10.64□□□□□ -0.71
RNF40-205ENST00000563909 A0A087WWL8 130 aa10.63□□□□□ -0.71
RNF40-205ENST00000563909 LRCOL1A6NCL2 159 aa10.63□□□□□ -0.71
RNF40-205ENST00000563909 TWIST1Q15672 202 aa10.63□□□□□ -0.71
RNF40-205ENST00000563909 C10orf91Q5T1B1 145 aa10.63□□□□□ -0.71
RNF40-205ENST00000563909 PRADC1Q9BSG0 188 aa10.63□□□□□ -0.71
RNF40-205ENST00000563909 NAT8BQ9UHF3 227 aa10.63□□□□□ -0.71
RNF40-205ENST00000563909 SMIM27A0A1W2PRY6 76 aa10.62□□□□□ -0.71
RNF40-205ENST00000563909 PSCAO43653 123 aa10.62□□□□□ -0.71
RNF40-205ENST00000563909 RHOHQ15669 191 aa10.62□□□□□ -0.71
RNF40-205ENST00000563909 Q6ZSA8 131 aa10.62□□□□□ -0.71
RNF40-205ENST00000563909 C14orf178Q8N769 122 aaPredicted RBP10.62□□□□□ -0.71
RNF40-205ENST00000563909 Q8N814 137 aa10.62□□□□□ -0.71
RNF40-205ENST00000563909 PKHD1L1Q86WI1 4243 aa10.62□□□□□ -0.71
RNF40-205ENST00000563909 A0A1B0GUT8 65 aa10.61□□□□□ -0.71
RNF40-205ENST00000563909 MRPL23Q16540 153 aaKnown RBP10.61□□□□□ -0.71
RNF40-205ENST00000563909 LYPD5Q6UWN5 251 aa10.61□□□□□ -0.71
RNF40-205ENST00000563909 SMIM15Q7Z3B0 74 aa10.61□□□□□ -0.71
RNF40-205ENST00000563909 SLC25A29Q8N8R3 303 aa10.61□□□□□ -0.71
RNF40-205ENST00000563909 NUP35Q8NFH5 326 aa10.61□□□□□ -0.71
RNF40-205ENST00000563909 CARHSP1Q9Y2V2 147 aaKnown RBP10.61□□□□□ -0.71
RNF40-205ENST00000563909 K7EP13 123 aa10.6□□□□□ -0.71
RNF40-205ENST00000563909 GYPEP15421 78 aa10.6□□□□□ -0.71
RNF40-205ENST00000563909 EVI2AP22794 236 aa10.6□□□□□ -0.71
RNF40-205ENST00000563909 RAB4BP61018 213 aa10.6□□□□□ -0.71
RNF40-205ENST00000563909 RIGQ13278 110 aa10.6□□□□□ -0.71
RNF40-205ENST00000563909 ZNF56Q15929 161 aa10.6□□□□□ -0.71
RNF40-205ENST00000563909 NDUFA5Q16718 116 aa10.6□□□□□ -0.71
RNF40-205ENST00000563909 DPH3P1Q9H4G8 78 aa10.6□□□□□ -0.71
RNF40-205ENST00000563909 KIF25-AS1Q9Y6Z4 181 aa10.6□□□□□ -0.71
RNF40-205ENST00000563909 F5H697 171 aa10.59□□□□□ -0.71
RNF40-205ENST00000563909 K7EQD1 137 aa10.59□□□□□ -0.71
RNF40-205ENST00000563909 CTDSP1Q9GZU7 261 aa10.59□□□□□ -0.71
RNF40-205ENST00000563909 SRIP30626 198 aa10.58□□□□□ -0.72
RNF40-205ENST00000563909 NEGR1Q7Z3B1 354 aa10.58□□□□□ -0.72
RNF40-205ENST00000563909 SH2D6Q7Z4S9 175 aa10.58□□□□□ -0.72
RNF40-205ENST00000563909 MGPP08493 103 aa10.57□□□□□ -0.72
RNF40-205ENST00000563909 SCXQ7RTU7 201 aa10.57□□□□□ -0.72
RNF40-205ENST00000563909 WFDC10BQ8IUB3 73 aa10.57□□□□□ -0.72
RNF40-205ENST00000563909 TRBV10-1A0A0K0K1A3 114 aa10.56□□□□□ -0.72
RNF40-205ENST00000563909 LOC100131303A0A0U1RQF7 123 aa10.56□□□□□ -0.72
RNF40-205ENST00000563909 A0A1B0GW15 77 aa10.56□□□□□ -0.72
RNF40-205ENST00000563909 RHEBQ15382 184 aa10.56□□□□□ -0.72
RNF40-205ENST00000563909 SLC7A5P1Q8MH63 180 aa10.56□□□□□ -0.72
RNF40-205ENST00000563909 CLRN3Q8NCR9 226 aa10.56□□□□□ -0.72
RNF40-205ENST00000563909 IMMP2LQ96T52 175 aa10.56□□□□□ -0.72
RNF40-205ENST00000563909 H7C1H1 209 aa10.55□□□□□ -0.72
RNF40-205ENST00000563909 APOC3P02656 99 aa10.55□□□□□ -0.72
RNF40-205ENST00000563909 SVBPQ8N300 66 aa10.55□□□□□ -0.72
RNF40-205ENST00000563909 TMEM191AQ9H0A3 160 aa10.55□□□□□ -0.72
RNF40-205ENST00000563909 TMEM242Q9NWH2 141 aa10.55□□□□□ -0.72
RNF40-205ENST00000563909 A0A087WWC5 75 aa10.54□□□□□ -0.72
RNF40-205ENST00000563909 C7orf77A4D0Y5 90 aa10.54□□□□□ -0.72
RNF40-205ENST00000563909 GAGE12JA6NER3 117 aa10.54□□□□□ -0.72
RNF40-205ENST00000563909 S100A8P05109 93 aa10.54□□□□□ -0.72
RNF40-205ENST00000563909 RPL36AP83881 106 aaKnown RBP10.54□□□□□ -0.72
RNF40-205ENST00000563909 GAGE1Q13065 139 aa10.54□□□□□ -0.72
RNF40-205ENST00000563909 GAGE4Q13068 117 aa10.54□□□□□ -0.72
RNF40-205ENST00000563909 GAGE5Q13069 117 aa10.54□□□□□ -0.72
RNF40-205ENST00000563909 GAGE13Q4V321 117 aa10.54□□□□□ -0.72
RNF40-205ENST00000563909 RPL36ALQ969Q0 106 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms