RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 A0A0J9YY99 117 aa8.88□□□□□ -0.99
ABCA3-203ENST00000563623 NPC2P61916 151 aa8.88□□□□□ -0.99
ABCA3-203ENST00000563623 NDUFA11Q86Y39 141 aa8.88□□□□□ -0.99
ABCA3-203ENST00000563623 DUX5Q96PT3 197 aa8.88□□□□□ -0.99
ABCA3-203ENST00000563623 TLN2Q9Y4G6 2542 aa8.87□□□□□ -0.99
ABCA3-203ENST00000563623 TRAV4A0A0B4J268 109 aa8.87□□□□□ -0.99
ABCA3-203ENST00000563623 LOC107984640A0A0U1RRK4 108 aa8.87□□□□□ -0.99
ABCA3-203ENST00000563623 SPINK13Q1W4C9 94 aa8.87□□□□□ -0.99
ABCA3-203ENST00000563623 CFAP126Q5VTH2 177 aa8.87□□□□□ -0.99
ABCA3-203ENST00000563623 DAZ1Q9NQZ3 744 aaKnown RBP8.87□□□□□ -0.99
ABCA3-203ENST00000563623 CRYGDP07320 174 aa8.87□□□□□ -0.99
ABCA3-203ENST00000563623 TSPEAR-AS2P59090 65 aa8.87□□□□□ -0.99
ABCA3-203ENST00000563623 MDFICQ9P1T7 246 aa8.87□□□□□ -0.99
ABCA3-203ENST00000563623 SMCPP49901 116 aaPredicted RBP8.87□□□□□ -0.99
ABCA3-203ENST00000563623 RNASE13Q5GAN3 156 aaKnown RBP8.87□□□□□ -0.99
ABCA3-203ENST00000563623 PIMREGQ9BSJ6 248 aa8.87□□□□□ -0.99
ABCA3-203ENST00000563623 PRO1854Q9UHT4 67 aa8.87□□□□□ -0.99
ABCA3-203ENST00000563623 ZNF876PQ49A33 203 aa8.86□□□□□ -0.99
ABCA3-203ENST00000563623 CSDC2Q9Y534 153 aaKnown RBP8.86□□□□□ -0.99
ABCA3-203ENST00000563623 TSHBP01222 138 aa8.86□□□□□ -0.99
ABCA3-203ENST00000563623 IGLV4-69A0A075B6H9 119 aa8.85□□□□□ -0.99
ABCA3-203ENST00000563623 CFC1BP0CG36 223 aa8.85□□□□□ -0.99
ABCA3-203ENST00000563623 CFC1P0CG37 223 aa8.85□□□□□ -0.99
ABCA3-203ENST00000563623 USMG5Q96IX5 58 aa8.85□□□□□ -0.99
ABCA3-203ENST00000563623 A0A0J9YXV3 536 aa8.85□□□□□ -0.99
ABCA3-203ENST00000563623 UBE2D1P51668 147 aa8.85□□□□□ -0.99
ABCA3-203ENST00000563623 C9orf153Q5TBE3 101 aa8.85□□□□□ -0.99
ABCA3-203ENST00000563623 TRPT1Q86TN4 253 aaKnown RBP8.85□□□□□ -0.99
ABCA3-203ENST00000563623 TEN1Q86WV5 123 aa8.85□□□□□ -0.99
ABCA3-203ENST00000563623 ZNRF2Q8NHG8 242 aa8.85□□□□□ -0.99
ABCA3-203ENST00000563623 TMEM141Q96I45 108 aa8.85□□□□□ -0.99
ABCA3-203ENST00000563623 IGHV4-61A0A0C4DH41 118 aa8.85□□□□□ -0.99
ABCA3-203ENST00000563623 FHL3Q13643 280 aa8.85□□□□□ -0.99
ABCA3-203ENST00000563623 C15orf53Q8NAA6 179 aa8.85□□□□□ -0.99
ABCA3-203ENST00000563623 KNCNA6PVL3 124 aa8.84□□□□□ -0.99
ABCA3-203ENST00000563623 NHLRC4P0CG21 123 aaPredicted RBP8.84□□□□□ -0.99
ABCA3-203ENST00000563623 ANKRD29Q8N6D5 301 aa8.84□□□□□ -0.99
ABCA3-203ENST00000563623 CHCHD5Q9BSY4 110 aa8.84□□□□□ -0.99
ABCA3-203ENST00000563623 RNF223E7ERA6 249 aa8.84□□□□□ -0.99
ABCA3-203ENST00000563623 SETD2Q9BYW2 2564 aaPredicted RBP8.84□□□□□ -0.99
ABCA3-203ENST00000563623 IGIPA6NJ69 53 aa8.84□□□□□ -1
ABCA3-203ENST00000563623 LINC00694P0DN24 101 aa8.84□□□□□ -1
ABCA3-203ENST00000563623 COX6B1P14854 86 aa8.84□□□□□ -1
ABCA3-203ENST00000563623 SNRPD3P62318 126 aaKnown RBP8.84□□□□□ -1
ABCA3-203ENST00000563623 LINC01619G3V211 115 aa8.83□□□□□ -1
ABCA3-203ENST00000563623 RHODO00212 210 aa8.83□□□□□ -1
ABCA3-203ENST00000563623 POLR2KP53803 58 aaKnown RBP8.83□□□□□ -1
ABCA3-203ENST00000563623 EDA2RQ9HAV5 297 aa8.83□□□□□ -1
ABCA3-203ENST00000563623 WNK1Q9H4A3 2382 aa8.83□□□□□ -1
ABCA3-203ENST00000563623 SMIM9A6NGZ8 99 aa8.83□□□□□ -1
ABCA3-203ENST00000563623 SOCS3O14543 225 aa8.83□□□□□ -1
ABCA3-203ENST00000563623 SLC25A20O43772 301 aa8.83□□□□□ -1
ABCA3-203ENST00000563623 CD28P10747 220 aa8.83□□□□□ -1
ABCA3-203ENST00000563623 MUSTN1Q8IVN3 82 aa8.83□□□□□ -1
ABCA3-203ENST00000563623 Q8N1Y9 231 aa8.83□□□□□ -1
ABCA3-203ENST00000563623 NBL1P41271 181 aa8.82□□□□□ -1
ABCA3-203ENST00000563623 TRAV8-4A0A0B4J246 113 aa8.82□□□□□ -1
ABCA3-203ENST00000563623 IGHV3-30P01768 117 aa8.82□□□□□ -1
ABCA3-203ENST00000563623 IGHV3-30-5P0DP03 117 aa8.82□□□□□ -1
ABCA3-203ENST00000563623 MED14OSP0DP75 135 aa8.82□□□□□ -1
ABCA3-203ENST00000563623 SLC25A29Q8N8R3 303 aa8.82□□□□□ -1
ABCA3-203ENST00000563623 OR13C6PQ8NH95 151 aa8.82□□□□□ -1
ABCA3-203ENST00000563623 LRRK2Q5S007 2527 aa8.82□□□□□ -1
ABCA3-203ENST00000563623 C10orf99Q6UWK7 81 aa8.82□□□□□ -1
ABCA3-203ENST00000563623 USP9XQ93008 2570 aaPredicted RBP8.82□□□□□ -1
ABCA3-203ENST00000563623 C19orf84I3L1E1 186 aa8.81□□□□□ -1
ABCA3-203ENST00000563623 CRLF1O75462 422 aa8.81□□□□□ -1
ABCA3-203ENST00000563623 CEMP1Q6PRD7 247 aaPredicted RBP8.81□□□□□ -1
ABCA3-203ENST00000563623 CARD19Q96LW7 228 aa8.81□□□□□ -1
ABCA3-203ENST00000563623 ZNF580Q9UK33 172 aa8.81□□□□□ -1
ABCA3-203ENST00000563623 POLQO75417 2590 aa8.81□□□□□ -1
ABCA3-203ENST00000563623 MYO9AB2RTY4 2548 aa8.81□□□□□ -1
ABCA3-203ENST00000563623 UCNP55089 124 aa8.81□□□□□ -1
ABCA3-203ENST00000563623 SYNJ2BPP57105 145 aa8.81□□□□□ -1
ABCA3-203ENST00000563623 LINC00315P59091 139 aa8.81□□□□□ -1
ABCA3-203ENST00000563623 TIMM17AQ99595 171 aa8.81□□□□□ -1
ABCA3-203ENST00000563623 P0DMU3 169 aa8.81□□□□□ -1
ABCA3-203ENST00000563623 FAM231AP0DMU4 169 aa8.81□□□□□ -1
ABCA3-203ENST00000563623 FAM231CP0DMU5 169 aa8.81□□□□□ -1
ABCA3-203ENST00000563623 NTN5Q8WTR8 489 aaPredicted RBP8.81□□□□□ -1
ABCA3-203ENST00000563623 KIF25-AS1Q9Y6Z4 181 aa8.81□□□□□ -1
ABCA3-203ENST00000563623 A0A0U1RRA0 63 aa8.8□□□□□ -1
ABCA3-203ENST00000563623 CRIP2P52943 208 aaPredicted RBP8.8□□□□□ -1
ABCA3-203ENST00000563623 IGHV4OR15-8A0A075B7B6 117 aa8.8□□□□□ -1
ABCA3-203ENST00000563623 IGHV1OR15-1A0A075B7D0 117 aa8.8□□□□□ -1
ABCA3-203ENST00000563623 A0A087WW49 117 aa8.8□□□□□ -1
ABCA3-203ENST00000563623 IGHG2P01859 326 aa8.8□□□□□ -1
ABCA3-203ENST00000563623 UBE2D3P61077 147 aa8.8□□□□□ -1
ABCA3-203ENST00000563623 UBE2D2P62837 147 aa8.8□□□□□ -1
ABCA3-203ENST00000563623 KHDC1LQ5JSQ8 128 aa8.8□□□□□ -1
ABCA3-203ENST00000563623 ATP6V0E2Q8NHE4 81 aa8.8□□□□□ -1
ABCA3-203ENST00000563623 TMEM126AQ9H061 195 aa8.8□□□□□ -1
ABCA3-203ENST00000563623 CCL19Q99731 98 aa8.8□□□□□ -1
ABCA3-203ENST00000563623 ABCA2Q9BZC7 2435 aa8.79□□□□□ -1
ABCA3-203ENST00000563623 TRAV8-3A0A0A6YYJ7 113 aa8.79□□□□□ -1
ABCA3-203ENST00000563623 TRAV25A0A0B4J276 109 aa8.79□□□□□ -1
ABCA3-203ENST00000563623 PRRC2AP48634 2157 aaKnown RBP8.79□□□□□ -1
ABCA3-203ENST00000563623 PRM2P04554 102 aa8.79□□□□□ -1
ABCA3-203ENST00000563623 GNLYP22749 145 aa8.79□□□□□ -1
ABCA3-203ENST00000563623 FASNP49327 2511 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms