RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 VAX2Q9UIW0 290 aa11.96□□□□□ -0.49
NME3-204ENST00000563498 CXCL1P09341 107 aa11.95□□□□□ -0.5
NME3-204ENST00000563498 CIRBPQ14011 172 aaKnown RBP11.95□□□□□ -0.5
NME3-204ENST00000563498 NTM-AS1Q6ZSK4 140 aa11.95□□□□□ -0.5
NME3-204ENST00000563498 RBX1P62877 108 aa11.94□□□□□ -0.5
NME3-204ENST00000563498 Q5BKY6 102 aa11.94□□□□□ -0.5
NME3-204ENST00000563498 AKR1C8PQ5T2L2 129 aa11.94□□□□□ -0.5
NME3-204ENST00000563498 LINC00269Q8N2A0 174 aa11.94□□□□□ -0.5
NME3-204ENST00000563498 OR10AG1Q8NH19 301 aa11.94□□□□□ -0.5
NME3-204ENST00000563498 ZNF471Q9BX82 626 aaPredicted RBP11.94□□□□□ -0.5
NME3-204ENST00000563498 MAP1LC3B2A6NCE7 125 aa11.93□□□□□ -0.5
NME3-204ENST00000563498 CNBPP62633 177 aaKnown RBP11.93□□□□□ -0.5
NME3-204ENST00000563498 SSBP4Q9BWG4 385 aaPredicted RBP11.93□□□□□ -0.5
NME3-204ENST00000563498 MAP1LC3BQ9GZQ8 125 aa11.93□□□□□ -0.5
NME3-204ENST00000563498 MED28Q9H204 178 aa11.93□□□□□ -0.5
NME3-204ENST00000563498 SNAI2O43623 268 aa11.92□□□□□ -0.5
NME3-204ENST00000563498 S100A1P23297 94 aa11.92□□□□□ -0.5
NME3-204ENST00000563498 AKR1C3P42330 323 aa11.92□□□□□ -0.5
NME3-204ENST00000563498 TRBV25-1A0A075B6N4 114 aa11.91□□□□□ -0.5
NME3-204ENST00000563498 GIPP09681 153 aaPredicted RBP11.91□□□□□ -0.5
NME3-204ENST00000563498 OR5AL1P0C617 328 aa11.91□□□□□ -0.5
NME3-204ENST00000563498 CLPSL2Q6UWE3 100 aa11.91□□□□□ -0.5
NME3-204ENST00000563498 DERL1Q9BUN8 251 aa11.91□□□□□ -0.5
NME3-204ENST00000563498 F5H697 171 aa11.9□□□□□ -0.5
NME3-204ENST00000563498 S100A9P06702 114 aaKnown RBP11.9□□□□□ -0.5
NME3-204ENST00000563498 GAGE6Q13070 117 aa11.9□□□□□ -0.5
NME3-204ENST00000563498 IQCJQ1A5X6 159 aa11.9□□□□□ -0.5
NME3-204ENST00000563498 CST9LP1Q5W188 147 aa11.9□□□□□ -0.5
NME3-204ENST00000563498 STOML3Q8TAV4 291 aa11.9□□□□□ -0.5
NME3-204ENST00000563498 RNF185Q96GF1 192 aa11.9□□□□□ -0.5
NME3-204ENST00000563498 hCG_2014768A0A024R1R8 64 aa11.89□□□□□ -0.51
NME3-204ENST00000563498 SPANXN1Q5VSR9 72 aa11.89□□□□□ -0.51
NME3-204ENST00000563498 TRAV8-4A0A0B4J246 113 aa11.88□□□□□ -0.51
NME3-204ENST00000563498 hDV102S1A0JD36 115 aa11.88□□□□□ -0.51
NME3-204ENST00000563498 P01737 135 aa11.88□□□□□ -0.51
NME3-204ENST00000563498 REG3AQ06141 175 aa11.88□□□□□ -0.51
NME3-204ENST00000563498 NDUFA5Q16718 116 aa11.88□□□□□ -0.51
NME3-204ENST00000563498 MLST8Q9BVC4 326 aa11.88□□□□□ -0.51
NME3-204ENST00000563498 KIF25-AS1Q9Y6Z4 181 aa11.88□□□□□ -0.51
NME3-204ENST00000563498 IGHV3-64A0A075B6Q5 118 aa11.87□□□□□ -0.51
NME3-204ENST00000563498 FXYD6-FXYD2A0A087WZ82 144 aa11.87□□□□□ -0.51
NME3-204ENST00000563498 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.87□□□□□ -0.51
NME3-204ENST00000563498 IGHV1-24A0A0C4DH33 117 aa11.87□□□□□ -0.51
NME3-204ENST00000563498 SMIM17P0DL12 118 aa11.87□□□□□ -0.51
NME3-204ENST00000563498 IGLV10-54A0A075B6I4 117 aa11.86□□□□□ -0.51
NME3-204ENST00000563498 AP1S3Q96PC3 154 aa11.86□□□□□ -0.51
NME3-204ENST00000563498 AP5S1Q9NUS5 200 aa11.86□□□□□ -0.51
NME3-204ENST00000563498 A0A087WYN8 130 aa11.85□□□□□ -0.51
NME3-204ENST00000563498 MUC21A0A0G2JKD1 596 aa11.85□□□□□ -0.51
NME3-204ENST00000563498 MUC21A0A140T8X8 626 aa11.85□□□□□ -0.51
NME3-204ENST00000563498 PAGE4O60829 102 aa11.85□□□□□ -0.51
NME3-204ENST00000563498 GZMBP10144 247 aa11.85□□□□□ -0.51
NME3-204ENST00000563498 SPACA4Q8TDM5 124 aa11.85□□□□□ -0.51
NME3-204ENST00000563498 DPH3Q96FX2 82 aa11.85□□□□□ -0.51
NME3-204ENST00000563498 A0A1B0GUV1 79 aa11.84□□□□□ -0.51
NME3-204ENST00000563498 BAGE2Q86Y30 109 aa11.84□□□□□ -0.51
NME3-204ENST00000563498 C20orf203Q8NBC4 194 aa11.84□□□□□ -0.51
NME3-204ENST00000563498 RNF213Q63HN8 5207 aa11.84□□□□□ -0.51
NME3-204ENST00000563498 H7C1H1 209 aa11.83□□□□□ -0.52
NME3-204ENST00000563498 M0QY20 66 aa11.83□□□□□ -0.52
NME3-204ENST00000563498 SLPIP03973 132 aa11.83□□□□□ -0.52
NME3-204ENST00000563498 CYTL1Q9NRR1 136 aa11.83□□□□□ -0.52
NME3-204ENST00000563498 PLAC8Q9NZF1 115 aa11.83□□□□□ -0.52
NME3-204ENST00000563498 CHTF8P0CG12 524 aa11.82□□□□□ -0.52
NME3-204ENST00000563498 TNXBP22105 4242 aa11.81□□□□□ -0.52
NME3-204ENST00000563498 LRP2P98164 4655 aa11.81□□□□□ -0.52
NME3-204ENST00000563498 SCO2A0A1W2PP80 73 aa11.81□□□□□ -0.52
NME3-204ENST00000563498 SSTP61278 116 aa11.81□□□□□ -0.52
NME3-204ENST00000563498 C7orf33Q8WU49 177 aa11.81□□□□□ -0.52
NME3-204ENST00000563498 TMEM243Q9BU79 118 aa11.8□□□□□ -0.52
NME3-204ENST00000563498 DPH3P1Q9H4G8 78 aa11.8□□□□□ -0.52
NME3-204ENST00000563498 IGLV4-60A0A075B6I1 120 aa11.79□□□□□ -0.52
NME3-204ENST00000563498 PHOX2AO14813 284 aa11.79□□□□□ -0.52
NME3-204ENST00000563498 SFT2D1Q8WV19 159 aa11.79□□□□□ -0.52
NME3-204ENST00000563498 MBD3L1Q8WWY6 194 aa11.79□□□□□ -0.52
NME3-204ENST00000563498 PGLYRP4Q96LB8 373 aa11.79□□□□□ -0.52
NME3-204ENST00000563498 GFRA4Q9GZZ7 299 aa11.79□□□□□ -0.52
NME3-204ENST00000563498 G3V3Q6 166 aa11.78□□□□□ -0.52
NME3-204ENST00000563498 MGPP08493 103 aa11.78□□□□□ -0.52
NME3-204ENST00000563498 SUMO4Q6EEV6 95 aa11.78□□□□□ -0.52
NME3-204ENST00000563498 WDR73Q6P4I2 378 aa11.78□□□□□ -0.52
NME3-204ENST00000563498 TMUB2Q71RG4 321 aa11.78□□□□□ -0.52
NME3-204ENST00000563498 LINC01600Q96MT4 127 aa11.78□□□□□ -0.52
NME3-204ENST00000563498 ARPC5O15511 151 aa11.77□□□□□ -0.53
NME3-204ENST00000563498 IGLC6P0CF74 106 aa11.77□□□□□ -0.53
NME3-204ENST00000563498 RAB5CP51148 216 aa11.77□□□□□ -0.53
NME3-204ENST00000563498 UMAD1C9J7I0 102 aa11.76□□□□□ -0.53
NME3-204ENST00000563498 NKX2-5P52952 324 aaPredicted RBP11.76□□□□□ -0.53
NME3-204ENST00000563498 CFAP161Q6P656 301 aa11.76□□□□□ -0.53
NME3-204ENST00000563498 RASL11AQ6T310 242 aa11.76□□□□□ -0.53
NME3-204ENST00000563498 RPL35P42766 123 aaKnown RBP11.75□□□□□ -0.53
NME3-204ENST00000563498 CACNG7P62955 275 aa11.75□□□□□ -0.53
NME3-204ENST00000563498 RGS21Q2M5E4 152 aa11.75□□□□□ -0.53
NME3-204ENST00000563498 C15orf56Q8N910 161 aa11.75□□□□□ -0.53
NME3-204ENST00000563498 FER1L6-AS1Q8NA97 138 aa11.75□□□□□ -0.53
NME3-204ENST00000563498 FAM213BQ8TBF2 198 aa11.75□□□□□ -0.53
NME3-204ENST00000563498 UBE2L6O14933 153 aa11.74□□□□□ -0.53
NME3-204ENST00000563498 NDUFS6O75380 124 aaKnown RBP11.74□□□□□ -0.53
NME3-204ENST00000563498 RPS10P46783 165 aaKnown RBP11.74□□□□□ -0.53
NME3-204ENST00000563498 SULT1A2P50226 295 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 158.6 ms