RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 hDV103S1A0JD37 113 aa1.35□□□□□ -2.19
SHCBP1-202ENST00000563219 CCL16O15467 120 aa1.35□□□□□ -2.19
SHCBP1-202ENST00000563219 CCKP06307 115 aa1.35□□□□□ -2.19
SHCBP1-202ENST00000563219 UBE2G1P62253 170 aa1.35□□□□□ -2.19
SHCBP1-202ENST00000563219 PSMG4Q5JS54 123 aa1.35□□□□□ -2.19
SHCBP1-202ENST00000563219 Q6ZRN7 208 aaPredicted RBP1.35□□□□□ -2.19
SHCBP1-202ENST00000563219 DYNLRB2Q8TF09 96 aa1.35□□□□□ -2.19
SHCBP1-202ENST00000563219 TMEM141Q96I45 108 aa1.35□□□□□ -2.19
SHCBP1-202ENST00000563219 AMELYQ99218 206 aa1.35□□□□□ -2.19
SHCBP1-202ENST00000563219 RETNLBQ9BQ08 111 aa1.35□□□□□ -2.19
SHCBP1-202ENST00000563219 MRPL35Q9NZE8 188 aaKnown RBP1.35□□□□□ -2.19
SHCBP1-202ENST00000563219 MADDQ8WXG6 1647 aa1.35□□□□□ -2.19
SHCBP1-202ENST00000563219 MAP3K4Q9Y6R4 1608 aa1.35□□□□□ -2.19
SHCBP1-202ENST00000563219 ATP10BO94823 1461 aa1.35□□□□□ -2.19
SHCBP1-202ENST00000563219 LRRC9Q6ZRR7 1453 aa1.35□□□□□ -2.19
SHCBP1-202ENST00000563219 PXDNQ92626 1479 aa1.35□□□□□ -2.19
SHCBP1-202ENST00000563219 SHANK2Q9UPX8 1470 aa1.35□□□□□ -2.19
SHCBP1-202ENST00000563219 NUP98P52948 1817 aa1.35□□□□□ -2.19
SHCBP1-202ENST00000563219 CCDC88CQ9P219 2028 aa1.35□□□□□ -2.19
SHCBP1-202ENST00000563219 CROCC2H7BZ55 1655 aa1.35□□□□□ -2.19
SHCBP1-202ENST00000563219 ROBO1Q9Y6N7 1651 aa1.35□□□□□ -2.19
SHCBP1-202ENST00000563219 PLXNC1O60486 1568 aa1.34□□□□□ -2.19
SHCBP1-202ENST00000563219 ABCA8O94911 1581 aa1.34□□□□□ -2.19
SHCBP1-202ENST00000563219 VWDEQ8N2E2 1590 aa1.34□□□□□ -2.19
SHCBP1-202ENST00000563219 CFAP74Q9C0B2 1584 aa1.34□□□□□ -2.19
SHCBP1-202ENST00000563219 STRCQ7RTU9 1775 aa1.34□□□□□ -2.19
SHCBP1-202ENST00000563219 LAMC1P11047 1609 aa1.34□□□□□ -2.19
SHCBP1-202ENST00000563219 TRAV14DV4A0A0A6YYC5 116 aa1.34□□□□□ -2.19
SHCBP1-202ENST00000563219 A0A0D9SFI3 127 aa1.34□□□□□ -2.19
SHCBP1-202ENST00000563219 NUPR1O60356 82 aa1.34□□□□□ -2.19
SHCBP1-202ENST00000563219 ASAH2BP0C7U1 165 aa1.34□□□□□ -2.19
SHCBP1-202ENST00000563219 RHOHQ15669 191 aa1.34□□□□□ -2.19
SHCBP1-202ENST00000563219 Q1T7F1 81 aa1.34□□□□□ -2.19
SHCBP1-202ENST00000563219 ESRGQ1W209 222 aa1.34□□□□□ -2.19
SHCBP1-202ENST00000563219 KRTAP13-4Q3LI77 160 aa1.34□□□□□ -2.19
SHCBP1-202ENST00000563219 PCOTHQ58A44 107 aa1.34□□□□□ -2.19
SHCBP1-202ENST00000563219 TMEM170BQ5T4T1 132 aa1.34□□□□□ -2.19
SHCBP1-202ENST00000563219 CYP2G1PQ6ZSU1 146 aa1.34□□□□□ -2.19
SHCBP1-202ENST00000563219 LINC00269Q8N2A0 174 aa1.34□□□□□ -2.19
SHCBP1-202ENST00000563219 SPTSSBQ8NFR3 76 aa1.34□□□□□ -2.19
SHCBP1-202ENST00000563219 CCL4L1Q8NHW4 92 aa1.34□□□□□ -2.19
SHCBP1-202ENST00000563219 LHFPL6Q9Y693 200 aa1.34□□□□□ -2.19
SHCBP1-202ENST00000563219 NKTRP30414 1462 aaKnown RBP1.34□□□□□ -2.19
SHCBP1-202ENST00000563219 TOPAZ1Q8N9V7 1692 aa1.34□□□□□ -2.19
SHCBP1-202ENST00000563219 PLXNA4Q9HCM2 1894 aa1.34□□□□□ -2.19
SHCBP1-202ENST00000563219 MYO5AQ9Y4I1 1855 aaKnown RBP1.34□□□□□ -2.19
SHCBP1-202ENST00000563219 MYOFQ9NZM1 2061 aa1.34□□□□□ -2.19
SHCBP1-202ENST00000563219 HELZP42694 1942 aaKnown RBP1.34□□□□□ -2.2
SHCBP1-202ENST00000563219 CLASP1Q7Z460 1538 aa1.34□□□□□ -2.2
SHCBP1-202ENST00000563219 PATJQ8NI35 1801 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 ABCA6Q8N139 1617 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 MDC1Q14676 2089 aaKnown RBP1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 CLTCQ00610 1675 aaKnown RBP1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 IQSEC2Q5JU85 1478 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 PRXQ9BXM0 1461 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 FBN1P35555 2871 aaKnown RBP1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 ARHGEF28Q8N1W1 1705 aaKnown RBP1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 FXYD6-FXYD2A0A087WZ82 144 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 A6NN06 94 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 SNRPGP15A8MWD9 76 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 F2Z2F3 143 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 BCE1O60756 84 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 CXCL8P10145 99 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 ZNF56Q15929 161 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 CFAP126Q5VTH2 177 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 XAF1Q6GPH4 301 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 SLC48A1Q6P1K1 146 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 CASC2Q6XLA1 102 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 C6orf201Q7Z4U5 140 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 LINC00643Q86TS7 51 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 CYP4F30PQ9H0H9 118 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 FXYD6Q9H0Q3 95 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 DYNLRB1Q9NP97 96 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 MANBALQ9NQG1 85 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 NDUFA12Q9UI09 145 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 EML6Q6ZMW3 1958 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 KCPQ6ZWJ8 1503 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 LRRC7Q96NW7 1537 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 KIDINS220Q9ULH0 1771 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 DIP2AQ14689 1571 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 HEATR5BQ9P2D3 2071 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 CACNA1GO43497 2377 aa1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 FN1P02751 2386 aaKnown RBP1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 TARBP1Q13395 1621 aaKnown RBP1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 RNF17Q9BXT8 1623 aaKnown RBP1.33□□□□□ -2.2
SHCBP1-202ENST00000563219 FREM1Q5H8C1 2179 aa1.32□□□□□ -2.2
SHCBP1-202ENST00000563219 DOCK10Q96BY6 2186 aa1.32□□□□□ -2.2
SHCBP1-202ENST00000563219 BAZ2BQ9UIF8 2168 aaKnown RBP1.32□□□□□ -2.2
SHCBP1-202ENST00000563219 NWD2Q9ULI1 1742 aa1.32□□□□□ -2.2
SHCBP1-202ENST00000563219 CDK12Q9NYV4 1490 aaPredicted RBP1.32□□□□□ -2.2
SHCBP1-202ENST00000563219 LAMB4A4D0S4 1761 aa1.32□□□□□ -2.2
SHCBP1-202ENST00000563219 RGPD8O14715 1765 aaPredicted RBP1.32□□□□□ -2.2
SHCBP1-202ENST00000563219 RGPD5Q99666 1765 aa1.32□□□□□ -2.2
SHCBP1-202ENST00000563219 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.32□□□□□ -2.2
SHCBP1-202ENST00000563219 TRGV2A0A075B6R0 118 aa1.32□□□□□ -2.2
SHCBP1-202ENST00000563219 IGKV2D-26A0A0A0MRZ7 120 aa1.32□□□□□ -2.2
SHCBP1-202ENST00000563219 TRAV13-2A0A0B4J235 113 aa1.32□□□□□ -2.2
SHCBP1-202ENST00000563219 TRBV6-5A0A0K0K1A5 114 aa1.32□□□□□ -2.2
SHCBP1-202ENST00000563219 TCRBV4S1A1TA0A5B7 111 aa1.32□□□□□ -2.2
SHCBP1-202ENST00000563219 C9orf116Q5BN46 136 aaPredicted RBP1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms