RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 TMEM97Q5BJF2 176 aa11.91□□□□□ -0.5
CMTM3-204ENST00000562357 ALKAL2Q6UX46 152 aa11.91□□□□□ -0.5
CMTM3-204ENST00000562357 TRBV20OR9-2A0A075B6H5 130 aa11.9□□□□□ -0.5
CMTM3-204ENST00000562357 TRBV6-8A0A0A6YYG3 113 aa11.9□□□□□ -0.5
CMTM3-204ENST00000562357 LRCOL1A6NCL2 159 aa11.9□□□□□ -0.5
CMTM3-204ENST00000562357 TMEM262E9PQX1 116 aa11.9□□□□□ -0.5
CMTM3-204ENST00000562357 IGLC6P0CF74 106 aa11.9□□□□□ -0.5
CMTM3-204ENST00000562357 PKIAP61925 76 aa11.9□□□□□ -0.5
CMTM3-204ENST00000562357 Q8N1X5 172 aa11.9□□□□□ -0.5
CMTM3-204ENST00000562357 Q8N814 137 aa11.9□□□□□ -0.5
CMTM3-204ENST00000562357 KLK12Q9UKR0 248 aa11.9□□□□□ -0.5
CMTM3-204ENST00000562357 DNAH5Q8TE73 4624 aa11.89□□□□□ -0.51
CMTM3-204ENST00000562357 TRGC1P0CF51 173 aa11.89□□□□□ -0.51
CMTM3-204ENST00000562357 UBE2WQ96B02 151 aa11.88□□□□□ -0.51
CMTM3-204ENST00000562357 HSPG2P98160 4391 aa11.88□□□□□ -0.51
CMTM3-204ENST00000562357 IGKV2D-24A0A075B6R9 120 aa11.87□□□□□ -0.51
CMTM3-204ENST00000562357 CRPP02741 224 aa11.87□□□□□ -0.51
CMTM3-204ENST00000562357 Q0VG73 95 aa11.87□□□□□ -0.51
CMTM3-204ENST00000562357 CHCHD5Q9BSY4 110 aa11.87□□□□□ -0.51
CMTM3-204ENST00000562357 KIF25-AS1Q9Y6Z4 181 aa11.87□□□□□ -0.51
CMTM3-204ENST00000562357 TMEM250H0YL14 139 aa11.86□□□□□ -0.51
CMTM3-204ENST00000562357 KRTAP10-1P60331 282 aa11.86□□□□□ -0.51
CMTM3-204ENST00000562357 NUDT10Q8NFP7 164 aa11.86□□□□□ -0.51
CMTM3-204ENST00000562357 NUDT11Q96G61 164 aa11.86□□□□□ -0.51
CMTM3-204ENST00000562357 DNAJC30Q96LL9 226 aa11.86□□□□□ -0.51
CMTM3-204ENST00000562357 RPP21Q9H633 154 aaKnown RBP11.86□□□□□ -0.51
CMTM3-204ENST00000562357 LYZL1Q6UWQ5 148 aa11.85□□□□□ -0.51
CMTM3-204ENST00000562357 APOBP04114 4563 aaKnown RBP11.84□□□□□ -0.51
CMTM3-204ENST00000562357 TRBV25-1A0A075B6N4 114 aa11.84□□□□□ -0.51
CMTM3-204ENST00000562357 CEBPGP53567 150 aa11.84□□□□□ -0.51
CMTM3-204ENST00000562357 SUMO4Q6EEV6 95 aa11.84□□□□□ -0.51
CMTM3-204ENST00000562357 WDR73Q6P4I2 378 aa11.84□□□□□ -0.51
CMTM3-204ENST00000562357 OCC1Q8TAD7 63 aa11.84□□□□□ -0.51
CMTM3-204ENST00000562357 KRTAP4-5Q9BYR2 181 aa11.84□□□□□ -0.51
CMTM3-204ENST00000562357 RNASE7Q9H1E1 156 aaKnown RBP11.84□□□□□ -0.51
CMTM3-204ENST00000562357 DPH3P1Q9H4G8 78 aa11.84□□□□□ -0.51
CMTM3-204ENST00000562357 M0QY20 66 aa11.83□□□□□ -0.52
CMTM3-204ENST00000562357 LECT2O14960 151 aa11.83□□□□□ -0.52
CMTM3-204ENST00000562357 ANGP03950 147 aaKnown RBP11.83□□□□□ -0.52
CMTM3-204ENST00000562357 NTF3P20783 257 aa11.83□□□□□ -0.52
CMTM3-204ENST00000562357 CTRLP40313 264 aa11.83□□□□□ -0.52
CMTM3-204ENST00000562357 TWIST1Q15672 202 aa11.83□□□□□ -0.52
CMTM3-204ENST00000562357 RASL11AQ6T310 242 aa11.83□□□□□ -0.52
CMTM3-204ENST00000562357 SMIM15Q7Z3B0 74 aa11.83□□□□□ -0.52
CMTM3-204ENST00000562357 C15orf54Q8N8G6 183 aa11.83□□□□□ -0.52
CMTM3-204ENST00000562357 C1orf43Q9BWL3 253 aa11.83□□□□□ -0.52
CMTM3-204ENST00000562357 EIF5A2Q9GZV4 153 aaKnown RBP11.83□□□□□ -0.52
CMTM3-204ENST00000562357 EPM2AB3EWF7 344 aa11.82□□□□□ -0.52
CMTM3-204ENST00000562357 NKX2-5P52952 324 aaPredicted RBP11.82□□□□□ -0.52
CMTM3-204ENST00000562357 MPV17L2Q567V2 206 aa11.82□□□□□ -0.52
CMTM3-204ENST00000562357 BAALCQ8WXS3 180 aa11.82□□□□□ -0.52
CMTM3-204ENST00000562357 TMEM70Q9BUB7 260 aa11.82□□□□□ -0.52
CMTM3-204ENST00000562357 IGHV1-24A0A0C4DH33 117 aa11.81□□□□□ -0.52
CMTM3-204ENST00000562357 K7EN84 100 aa11.81□□□□□ -0.52
CMTM3-204ENST00000562357 Q8N976 141 aa11.81□□□□□ -0.52
CMTM3-204ENST00000562357 LYPD6BQ8NI32 183 aa11.81□□□□□ -0.52
CMTM3-204ENST00000562357 GATCO43716 136 aaKnown RBP11.8□□□□□ -0.52
CMTM3-204ENST00000562357 XGP55808 180 aa11.8□□□□□ -0.52
CMTM3-204ENST00000562357 WFDC2Q14508 124 aa11.8□□□□□ -0.52
CMTM3-204ENST00000562357 FRZBQ92765 325 aa11.8□□□□□ -0.52
CMTM3-204ENST00000562357 CNFNQ9BYD5 112 aa11.8□□□□□ -0.52
CMTM3-204ENST00000562357 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.79□□□□□ -0.52
CMTM3-204ENST00000562357 A8MWL6 223 aa11.79□□□□□ -0.52
CMTM3-204ENST00000562357 GAGE6Q13070 117 aa11.79□□□□□ -0.52
CMTM3-204ENST00000562357 NTM-AS1Q6ZSK4 140 aa11.79□□□□□ -0.52
CMTM3-204ENST00000562357 BORCS7Q96B45 105 aa11.79□□□□□ -0.52
CMTM3-204ENST00000562357 SMIM7Q9BQ49 75 aa11.79□□□□□ -0.52
CMTM3-204ENST00000562357 NIT2Q9NQR4 276 aa11.79□□□□□ -0.52
CMTM3-204ENST00000562357 MIAQ16674 131 aa11.78□□□□□ -0.52
CMTM3-204ENST00000562357 IQCJQ1A5X6 159 aa11.78□□□□□ -0.52
CMTM3-204ENST00000562357 C14orf177Q52M58 125 aa11.78□□□□□ -0.52
CMTM3-204ENST00000562357 ATRAIDQ6UW56 229 aa11.78□□□□□ -0.52
CMTM3-204ENST00000562357 FAM231DQ6ZW35 169 aa11.78□□□□□ -0.52
CMTM3-204ENST00000562357 NDUFS6O75380 124 aaKnown RBP11.77□□□□□ -0.53
CMTM3-204ENST00000562357 FAM210AQ96ND0 272 aa11.77□□□□□ -0.53
CMTM3-204ENST00000562357 TMEM243Q9BU79 118 aa11.77□□□□□ -0.53
CMTM3-204ENST00000562357 A0A1B0GVG6 124 aa11.76□□□□□ -0.53
CMTM3-204ENST00000562357 RBX1P62877 108 aa11.76□□□□□ -0.53
CMTM3-204ENST00000562357 COTL1Q14019 142 aa11.76□□□□□ -0.53
CMTM3-204ENST00000562357 CT83Q5H943 113 aa11.76□□□□□ -0.53
CMTM3-204ENST00000562357 ENHOQ6UWT2 76 aa11.76□□□□□ -0.53
CMTM3-204ENST00000562357 ABCA13Q86UQ4 5058 aa11.76□□□□□ -0.53
CMTM3-204ENST00000562357 ZNF727A8MUV8 499 aa11.75□□□□□ -0.53
CMTM3-204ENST00000562357 UBE2L6O14933 153 aa11.75□□□□□ -0.53
CMTM3-204ENST00000562357 GTSF1Q8WW33 167 aa11.75□□□□□ -0.53
CMTM3-204ENST00000562357 PGLYRP4Q96LB8 373 aa11.75□□□□□ -0.53
CMTM3-204ENST00000562357 HLA-DQA1P01909 254 aa11.74□□□□□ -0.53
CMTM3-204ENST00000562357 TEX261Q6UWH6 196 aa11.74□□□□□ -0.53
CMTM3-204ENST00000562357 LINC00269Q8N2A0 174 aa11.74□□□□□ -0.53
CMTM3-204ENST00000562357 FAM229AH3BQW9 127 aa11.73□□□□□ -0.53
CMTM3-204ENST00000562357 AMTP48728 403 aa11.73□□□□□ -0.53
CMTM3-204ENST00000562357 Q5VSD8 79 aa11.73□□□□□ -0.53
CMTM3-204ENST00000562357 CLPSL2Q6UWE3 100 aa11.73□□□□□ -0.53
CMTM3-204ENST00000562357 LINC01551Q86U37 167 aa11.73□□□□□ -0.53
CMTM3-204ENST00000562357 HAMPP81172 84 aa11.72□□□□□ -0.53
CMTM3-204ENST00000562357 PRR34Q9NV39 138 aa11.72□□□□□ -0.53
CMTM3-204ENST00000562357 TRAV26-2A0A0B4J265 109 aa11.71□□□□□ -0.53
CMTM3-204ENST00000562357 SMR3BP02814 79 aaPredicted RBP11.71□□□□□ -0.53
CMTM3-204ENST00000562357 SRP19P09132 144 aaKnown RBP11.71□□□□□ -0.53
CMTM3-204ENST00000562357 GATD1Q8NB37 220 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 1280.6 ms