RNA–Protein interactions for RNA: ENST00000562053.1

TUBGCP4-203, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-203ENST00000562053 FOXA3P55318 350 aaPredicted RBP4.86□□□□□ -1.63
TUBGCP4-203ENST00000562053 NEXN-AS1Q8NBZ9 246 aa4.86□□□□□ -1.63
TUBGCP4-203ENST00000562053 ATP6V0E2Q8NHE4 81 aa4.86□□□□□ -1.63
TUBGCP4-203ENST00000562053 GTSF1LQ9H1H1 148 aa4.86□□□□□ -1.63
TUBGCP4-203ENST00000562053 DPH3P1Q9H4G8 78 aa4.86□□□□□ -1.63
TUBGCP4-203ENST00000562053 PKD1P98161 4303 aa4.85□□□□□ -1.63
TUBGCP4-203ENST00000562053 TRBV7-3A0A075B6L6 115 aa4.85□□□□□ -1.63
TUBGCP4-203ENST00000562053 MGPP08493 103 aa4.85□□□□□ -1.63
TUBGCP4-203ENST00000562053 DNAH10OSP0CZ25 163 aa4.85□□□□□ -1.63
TUBGCP4-203ENST00000562053 UBE2D3P61077 147 aa4.85□□□□□ -1.63
TUBGCP4-203ENST00000562053 SSTP61278 116 aa4.85□□□□□ -1.63
TUBGCP4-203ENST00000562053 UBE2D2P62837 147 aa4.85□□□□□ -1.63
TUBGCP4-203ENST00000562053 RPL36AP83881 106 aaKnown RBP4.85□□□□□ -1.63
TUBGCP4-203ENST00000562053 LELP1Q5T871 98 aa4.85□□□□□ -1.63
TUBGCP4-203ENST00000562053 SUMO4Q6EEV6 95 aa4.85□□□□□ -1.63
TUBGCP4-203ENST00000562053 UQCC3Q6UW78 93 aa4.85□□□□□ -1.63
TUBGCP4-203ENST00000562053 LINC00336Q6ZUF6 198 aa4.85□□□□□ -1.63
TUBGCP4-203ENST00000562053 RPL36ALQ969Q0 106 aaKnown RBP4.85□□□□□ -1.63
TUBGCP4-203ENST00000562053 DYNC1H1Q14204 4646 aaKnown RBP4.85□□□□□ -1.63
TUBGCP4-203ENST00000562053 A0A1B0GUT8 65 aa4.84□□□□□ -1.63
TUBGCP4-203ENST00000562053 F5H697 171 aa4.84□□□□□ -1.63
TUBGCP4-203ENST00000562053 H7C1H1 209 aa4.84□□□□□ -1.63
TUBGCP4-203ENST00000562053 K7EP13 123 aa4.84□□□□□ -1.63
TUBGCP4-203ENST00000562053 M0QY20 66 aa4.84□□□□□ -1.63
TUBGCP4-203ENST00000562053 ADCYAP1P18509 176 aa4.84□□□□□ -1.63
TUBGCP4-203ENST00000562053 BTF3P20290 206 aaKnown RBP4.84□□□□□ -1.63
TUBGCP4-203ENST00000562053 PNRC1Q12796 327 aaPredicted RBP4.84□□□□□ -1.63
TUBGCP4-203ENST00000562053 TWIST1Q15672 202 aa4.84□□□□□ -1.63
TUBGCP4-203ENST00000562053 LINC01556Q5JQF7 62 aa4.84□□□□□ -1.63
TUBGCP4-203ENST00000562053 C1orf134Q5TEV5 83 aa4.84□□□□□ -1.63
TUBGCP4-203ENST00000562053 C6orf223Q8N319 242 aa4.84□□□□□ -1.63
TUBGCP4-203ENST00000562053 BORCS7Q96B45 105 aa4.84□□□□□ -1.63
TUBGCP4-203ENST00000562053 PGLYRP4Q96LB8 373 aa4.84□□□□□ -1.63
TUBGCP4-203ENST00000562053 A0A087WWC5 75 aa4.83□□□□□ -1.64
TUBGCP4-203ENST00000562053 TRAV8-6A0A0B4J262 113 aa4.83□□□□□ -1.64
TUBGCP4-203ENST00000562053 IGHV3-38A0A0C4DH36 116 aa4.83□□□□□ -1.64
TUBGCP4-203ENST00000562053 SMIM27A0A1W2PRY6 76 aa4.83□□□□□ -1.64
TUBGCP4-203ENST00000562053 OR10J3Q5JRS4 329 aa4.83□□□□□ -1.64
TUBGCP4-203ENST00000562053 CFAP161Q6P656 301 aa4.83□□□□□ -1.64
TUBGCP4-203ENST00000562053 COMMD7Q86VX2 200 aa4.83□□□□□ -1.64
TUBGCP4-203ENST00000562053 C10orf126Q8N4M7 172 aa4.83□□□□□ -1.64
TUBGCP4-203ENST00000562053 NUP35Q8NFH5 326 aa4.83□□□□□ -1.64
TUBGCP4-203ENST00000562053 NAT8BQ9UHF3 227 aa4.83□□□□□ -1.64
TUBGCP4-203ENST00000562053 TRAV26-2A0A0B4J265 109 aa4.82□□□□□ -1.64
TUBGCP4-203ENST00000562053 A0A1B0GVY2 172 aa4.82□□□□□ -1.64
TUBGCP4-203ENST00000562053 RASL11AQ6T310 242 aa4.82□□□□□ -1.64
TUBGCP4-203ENST00000562053 Q6ZRN7 208 aaPredicted RBP4.82□□□□□ -1.64
TUBGCP4-203ENST00000562053 SMIM15Q7Z3B0 74 aa4.82□□□□□ -1.64
TUBGCP4-203ENST00000562053 DAZ4Q86SG3 579 aaKnown RBP4.82□□□□□ -1.64
TUBGCP4-203ENST00000562053 FRZBQ92765 325 aa4.82□□□□□ -1.64
TUBGCP4-203ENST00000562053 DNAJC30Q96LL9 226 aa4.82□□□□□ -1.64
TUBGCP4-203ENST00000562053 TMEM191AQ9H0A3 160 aa4.82□□□□□ -1.64
TUBGCP4-203ENST00000562053 DAZ3Q9NR90 486 aaKnown RBP4.82□□□□□ -1.64
TUBGCP4-203ENST00000562053 TRBV6-8A0A0A6YYG3 113 aa4.81□□□□□ -1.64
TUBGCP4-203ENST00000562053 A0A1B0GXF2 115 aa4.81□□□□□ -1.64
TUBGCP4-203ENST00000562053 TMEM218A2RU14 115 aa4.81□□□□□ -1.64
TUBGCP4-203ENST00000562053 LINC00862A6NCI5 91 aa4.81□□□□□ -1.64
TUBGCP4-203ENST00000562053 PRSS29PA6NIE9 313 aa4.81□□□□□ -1.64
TUBGCP4-203ENST00000562053 PPP1R2P9O14990 202 aa4.81□□□□□ -1.64
TUBGCP4-203ENST00000562053 LAGE3Q14657 143 aa4.81□□□□□ -1.64
TUBGCP4-203ENST00000562053 Q8N3U1 123 aa4.81□□□□□ -1.64
TUBGCP4-203ENST00000562053 GATD1Q8NB37 220 aa4.81□□□□□ -1.64
TUBGCP4-203ENST00000562053 CHCHD7Q9BUK0 85 aa4.81□□□□□ -1.64
TUBGCP4-203ENST00000562053 NIT2Q9NQR4 276 aa4.81□□□□□ -1.64
TUBGCP4-203ENST00000562053 KIAA1109Q2LD37 5005 aa4.8□□□□□ -1.64
TUBGCP4-203ENST00000562053 TRAV9-2A0A087WT02 112 aa4.8□□□□□ -1.64
TUBGCP4-203ENST00000562053 A0A1B0GW15 77 aa4.8□□□□□ -1.64
TUBGCP4-203ENST00000562053 IGHV3-30P01768 117 aa4.8□□□□□ -1.64
TUBGCP4-203ENST00000562053 IGHV3-33P01772 117 aa4.8□□□□□ -1.64
TUBGCP4-203ENST00000562053 IGHV3-30-3P0DP02 117 aa4.8□□□□□ -1.64
TUBGCP4-203ENST00000562053 IGHV3-30-5P0DP03 117 aa4.8□□□□□ -1.64
TUBGCP4-203ENST00000562053 RIGQ13278 110 aa4.8□□□□□ -1.64
TUBGCP4-203ENST00000562053 IQCJQ1A5X6 159 aa4.8□□□□□ -1.64
TUBGCP4-203ENST00000562053 TMEM97Q5BJF2 176 aa4.8□□□□□ -1.64
TUBGCP4-203ENST00000562053 NTM-AS1Q6ZSK4 140 aa4.8□□□□□ -1.64
TUBGCP4-203ENST00000562053 ATP5L2Q7Z4Y8 100 aa4.8□□□□□ -1.64
TUBGCP4-203ENST00000562053 NIT1Q86X76 327 aa4.8□□□□□ -1.64
TUBGCP4-203ENST00000562053 AMN1Q8IY45 258 aa4.8□□□□□ -1.64
TUBGCP4-203ENST00000562053 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.8□□□□□ -1.64
TUBGCP4-203ENST00000562053 ANAPC16Q96DE5 110 aa4.8□□□□□ -1.64
TUBGCP4-203ENST00000562053 RPL39LQ96EH5 51 aaKnown RBP4.8□□□□□ -1.64
TUBGCP4-203ENST00000562053 MRAP2Q96G30 205 aa4.8□□□□□ -1.64
TUBGCP4-203ENST00000562053 RNF185Q96GF1 192 aa4.8□□□□□ -1.64
TUBGCP4-203ENST00000562053 SEC11CQ9BY50 192 aa4.8□□□□□ -1.64
TUBGCP4-203ENST00000562053 TNFRSF18Q9Y5U5 241 aa4.8□□□□□ -1.64
TUBGCP4-203ENST00000562053 DNAH5Q8TE73 4624 aa4.79□□□□□ -1.64
TUBGCP4-203ENST00000562053 TRBV25-1A0A075B6N4 114 aa4.79□□□□□ -1.64
TUBGCP4-203ENST00000562053 TRBV6-5A0A0K0K1A5 114 aa4.79□□□□□ -1.64
TUBGCP4-203ENST00000562053 IBA57-AS1B1ANH7 110 aa4.79□□□□□ -1.64
TUBGCP4-203ENST00000562053 F8W036 122 aa4.79□□□□□ -1.64
TUBGCP4-203ENST00000562053 MT-ND4LP03901 98 aa4.79□□□□□ -1.64
TUBGCP4-203ENST00000562053 HBBP68871 147 aa4.79□□□□□ -1.64
TUBGCP4-203ENST00000562053 MPV17L2Q567V2 206 aa4.79□□□□□ -1.64
TUBGCP4-203ENST00000562053 MRPL54Q6P161 138 aaKnown RBP4.79□□□□□ -1.64
TUBGCP4-203ENST00000562053 NFE4Q86UQ8 179 aa4.79□□□□□ -1.64
TUBGCP4-203ENST00000562053 CARHSP1Q9Y2V2 147 aaKnown RBP4.79□□□□□ -1.64
TUBGCP4-203ENST00000562053 IGHV1-24A0A0C4DH33 117 aa4.78□□□□□ -1.64
TUBGCP4-203ENST00000562053 SDHAF1A6NFY7 115 aa4.78□□□□□ -1.64
TUBGCP4-203ENST00000562053 GAS8-AS1O95177 125 aa4.78□□□□□ -1.64
TUBGCP4-203ENST00000562053 NCR2O95944 276 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 161.2 ms