RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 LINC00299Q6ZSB3 139 aa7.37□□□□□ -1.23
NSMCE1-202ENST00000561960 SPACA4Q8TDM5 124 aa7.37□□□□□ -1.23
NSMCE1-202ENST00000561960 IGLV4-60A0A075B6I1 120 aa7.36□□□□□ -1.23
NSMCE1-202ENST00000561960 A0A1B0GV50 99 aa7.36□□□□□ -1.23
NSMCE1-202ENST00000561960 A0A1W2PRE2 83 aa7.36□□□□□ -1.23
NSMCE1-202ENST00000561960 DEFA1P59665 94 aa7.36□□□□□ -1.23
NSMCE1-202ENST00000561960 RAB4BP61018 213 aa7.36□□□□□ -1.23
NSMCE1-202ENST00000561960 UBE2G1P62253 170 aa7.36□□□□□ -1.23
NSMCE1-202ENST00000561960 REG3AQ06141 175 aa7.36□□□□□ -1.23
NSMCE1-202ENST00000561960 LINC01559Q495D7 138 aa7.36□□□□□ -1.23
NSMCE1-202ENST00000561960 HIGD2BQ4VC39 106 aa7.36□□□□□ -1.23
NSMCE1-202ENST00000561960 DNLZQ5SXM8 178 aa7.36□□□□□ -1.23
NSMCE1-202ENST00000561960 RPL7L1Q6DKI1 246 aaKnown RBP7.36□□□□□ -1.23
NSMCE1-202ENST00000561960 OR10G8Q8NGN5 311 aa7.36□□□□□ -1.23
NSMCE1-202ENST00000561960 PRR34Q9NV39 138 aa7.36□□□□□ -1.23
NSMCE1-202ENST00000561960 TRBV6-1A0A0K0K1D8 114 aa7.35□□□□□ -1.23
NSMCE1-202ENST00000561960 MGPP08493 103 aa7.35□□□□□ -1.23
NSMCE1-202ENST00000561960 COX6A2Q02221 97 aa7.35□□□□□ -1.23
NSMCE1-202ENST00000561960 CIRBPQ14011 172 aaKnown RBP7.35□□□□□ -1.23
NSMCE1-202ENST00000561960 ZNF674Q2M3X9 581 aa7.35□□□□□ -1.23
NSMCE1-202ENST00000561960 MAJINQ3KP22 176 aa7.35□□□□□ -1.23
NSMCE1-202ENST00000561960 CST9LP1Q5W188 147 aa7.35□□□□□ -1.23
NSMCE1-202ENST00000561960 PRR27Q6MZM9 219 aa7.35□□□□□ -1.23
NSMCE1-202ENST00000561960 INO80EQ8NBZ0 244 aaPredicted RBP7.35□□□□□ -1.23
NSMCE1-202ENST00000561960 MARVELD1Q9BSK0 173 aa7.35□□□□□ -1.23
NSMCE1-202ENST00000561960 PSMG3Q9BT73 122 aaPredicted RBP7.35□□□□□ -1.23
NSMCE1-202ENST00000561960 PRR3P79522 188 aaKnown RBP7.34□□□□□ -1.23
NSMCE1-202ENST00000561960 C20orf203Q8NBC4 194 aa7.34□□□□□ -1.23
NSMCE1-202ENST00000561960 PRSS3P2Q8NHM4 247 aa7.34□□□□□ -1.23
NSMCE1-202ENST00000561960 S100ZQ8WXG8 99 aa7.34□□□□□ -1.23
NSMCE1-202ENST00000561960 ALG5Q9Y673 324 aa7.34□□□□□ -1.23
NSMCE1-202ENST00000561960 TRBV25-1A0A075B6N4 114 aa7.33□□□□□ -1.24
NSMCE1-202ENST00000561960 MBP02144 154 aa7.33□□□□□ -1.24
NSMCE1-202ENST00000561960 GZMBP10144 247 aa7.33□□□□□ -1.24
NSMCE1-202ENST00000561960 CNBPP62633 177 aaKnown RBP7.33□□□□□ -1.24
NSMCE1-202ENST00000561960 SPANXN1Q5VSR9 72 aa7.33□□□□□ -1.24
NSMCE1-202ENST00000561960 C7orf33Q8WU49 177 aa7.33□□□□□ -1.24
NSMCE1-202ENST00000561960 FMC1Q96HJ9 113 aa7.33□□□□□ -1.24
NSMCE1-202ENST00000561960 LINC01600Q96MT4 127 aa7.33□□□□□ -1.24
NSMCE1-202ENST00000561960 TPPP3Q9BW30 176 aa7.33□□□□□ -1.24
NSMCE1-202ENST00000561960 AP5S1Q9NUS5 200 aa7.33□□□□□ -1.24
NSMCE1-202ENST00000561960 CTXND1A0A1B0GTU2 59 aa7.32□□□□□ -1.24
NSMCE1-202ENST00000561960 LTAP01374 205 aa7.32□□□□□ -1.24
NSMCE1-202ENST00000561960 AKR1C3P42330 323 aa7.32□□□□□ -1.24
NSMCE1-202ENST00000561960 NKX2-5P52952 324 aaPredicted RBP7.32□□□□□ -1.24
NSMCE1-202ENST00000561960 RGS21Q2M5E4 152 aa7.32□□□□□ -1.24
NSMCE1-202ENST00000561960 C15orf56Q8N910 161 aa7.32□□□□□ -1.24
NSMCE1-202ENST00000561960 ZNF471Q9BX82 626 aaPredicted RBP7.32□□□□□ -1.24
NSMCE1-202ENST00000561960 TNFSF18Q9UNG2 199 aa7.32□□□□□ -1.24
NSMCE1-202ENST00000561960 ZFP30Q9Y2G7 519 aa7.32□□□□□ -1.24
NSMCE1-202ENST00000561960 MUC2Q02817 5179 aa7.31□□□□□ -1.24
NSMCE1-202ENST00000561960 IGHV1-24A0A0C4DH33 117 aa7.31□□□□□ -1.24
NSMCE1-202ENST00000561960 MAP1LC3B2A6NCE7 125 aa7.31□□□□□ -1.24
NSMCE1-202ENST00000561960 GAGE12HA6NDE8 117 aa7.31□□□□□ -1.24
NSMCE1-202ENST00000561960 FHITP49789 147 aa7.31□□□□□ -1.24
NSMCE1-202ENST00000561960 SERF2P84101 59 aa7.31□□□□□ -1.24
NSMCE1-202ENST00000561960 STPG4Q8N801 248 aa7.31□□□□□ -1.24
NSMCE1-202ENST00000561960 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.31□□□□□ -1.24
NSMCE1-202ENST00000561960 CLRN3Q8NCR9 226 aa7.31□□□□□ -1.24
NSMCE1-202ENST00000561960 HIST1H2BAQ96A08 127 aa7.31□□□□□ -1.24
NSMCE1-202ENST00000561960 LINC00526Q96FQ7 95 aa7.31□□□□□ -1.24
NSMCE1-202ENST00000561960 AQP10Q96PS8 301 aa7.31□□□□□ -1.24
NSMCE1-202ENST00000561960 MAP1LC3BQ9GZQ8 125 aa7.31□□□□□ -1.24
NSMCE1-202ENST00000561960 PLAC8Q9NZF1 115 aa7.31□□□□□ -1.24
NSMCE1-202ENST00000561960 FXYD6-FXYD2A0A087WZ82 144 aa7.3□□□□□ -1.24
NSMCE1-202ENST00000561960 A0A096LNI7 61 aa7.3□□□□□ -1.24
NSMCE1-202ENST00000561960 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.3□□□□□ -1.24
NSMCE1-202ENST00000561960 SCO2A0A1W2PP80 73 aa7.3□□□□□ -1.24
NSMCE1-202ENST00000561960 WDR73Q6P4I2 378 aa7.3□□□□□ -1.24
NSMCE1-202ENST00000561960 STOML3Q8TAV4 291 aa7.3□□□□□ -1.24
NSMCE1-202ENST00000561960 PAGE4O60829 102 aa7.29□□□□□ -1.24
NSMCE1-202ENST00000561960 SMIM17P0DL12 118 aa7.29□□□□□ -1.24
NSMCE1-202ENST00000561960 SULT1A2P50226 295 aa7.29□□□□□ -1.24
NSMCE1-202ENST00000561960 AKR1C8PQ5T2L2 129 aa7.29□□□□□ -1.24
NSMCE1-202ENST00000561960 SUMO4Q6EEV6 95 aa7.29□□□□□ -1.24
NSMCE1-202ENST00000561960 COX8CQ7Z4L0 72 aa7.29□□□□□ -1.24
NSMCE1-202ENST00000561960 VAX2Q9UIW0 290 aa7.29□□□□□ -1.24
NSMCE1-202ENST00000561960 A0A0J9YXV3 536 aa7.28□□□□□ -1.24
NSMCE1-202ENST00000561960 S100A1P23297 94 aa7.28□□□□□ -1.24
NSMCE1-202ENST00000561960 PKIAP61925 76 aa7.28□□□□□ -1.24
NSMCE1-202ENST00000561960 IQCJQ1A5X6 159 aa7.28□□□□□ -1.24
NSMCE1-202ENST00000561960 RNF185Q96GF1 192 aa7.28□□□□□ -1.24
NSMCE1-202ENST00000561960 TMEM243Q9BU79 118 aa7.28□□□□□ -1.24
NSMCE1-202ENST00000561960 M0QY20 66 aa7.27□□□□□ -1.25
NSMCE1-202ENST00000561960 SNAI2O43623 268 aa7.27□□□□□ -1.25
NSMCE1-202ENST00000561960 KRTAP10-8P60410 259 aa7.27□□□□□ -1.25
NSMCE1-202ENST00000561960 NDUFA5Q16718 116 aa7.27□□□□□ -1.25
NSMCE1-202ENST00000561960 AP1S3Q96PC3 154 aa7.27□□□□□ -1.25
NSMCE1-202ENST00000561960 BORCS7-ASMTA0A0B4J1R7 106 aa7.26□□□□□ -1.25
NSMCE1-202ENST00000561960 UBE2L6O14933 153 aa7.26□□□□□ -1.25
NSMCE1-202ENST00000561960 NDUFS6O75380 124 aaKnown RBP7.26□□□□□ -1.25
NSMCE1-202ENST00000561960 RPS10P46783 165 aaKnown RBP7.26□□□□□ -1.25
NSMCE1-202ENST00000561960 BAGE2Q86Y30 109 aa7.26□□□□□ -1.25
NSMCE1-202ENST00000561960 MED28Q9H204 178 aa7.26□□□□□ -1.25
NSMCE1-202ENST00000561960 TMEM97Q5BJF2 176 aa7.25□□□□□ -1.25
NSMCE1-202ENST00000561960 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.24□□□□□ -1.25
NSMCE1-202ENST00000561960 TRAV8-4A0A0B4J246 113 aa7.24□□□□□ -1.25
NSMCE1-202ENST00000561960 TRAV26-2A0A0B4J265 109 aa7.24□□□□□ -1.25
NSMCE1-202ENST00000561960 IGKV2-29A2NJV5 120 aaPredicted RBP7.24□□□□□ -1.25
NSMCE1-202ENST00000561960 P01737 135 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms