RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 A0A1B0GV50 99 aa9.43□□□□□ -0.9
SPG7-205ENST00000561945 A0A1B0GVG6 124 aa9.43□□□□□ -0.9
SPG7-205ENST00000561945 PAGE4O60829 102 aa9.43□□□□□ -0.9
SPG7-205ENST00000561945 SULT1A2P50226 295 aa9.43□□□□□ -0.9
SPG7-205ENST00000561945 C9orf62Q8N4C0 152 aa9.43□□□□□ -0.9
SPG7-205ENST00000561945 SSBP4Q9BWG4 385 aaPredicted RBP9.43□□□□□ -0.9
SPG7-205ENST00000561945 KCNIP4Q6PIL6 250 aa9.42□□□□□ -0.9
SPG7-205ENST00000561945 NEXN-AS1Q8NBZ9 246 aa9.42□□□□□ -0.9
SPG7-205ENST00000561945 MLST8Q9BVC4 326 aa9.42□□□□□ -0.9
SPG7-205ENST00000561945 C1orf43Q9BWL3 253 aa9.42□□□□□ -0.9
SPG7-205ENST00000561945 TRAV1-1A0A0B4J248 108 aa9.41□□□□□ -0.9
SPG7-205ENST00000561945 SNAI2O43623 268 aa9.41□□□□□ -0.9
SPG7-205ENST00000561945 S100A9P06702 114 aaKnown RBP9.41□□□□□ -0.9
SPG7-205ENST00000561945 MPV17L2Q567V2 206 aa9.41□□□□□ -0.9
SPG7-205ENST00000561945 MANBALQ9NQG1 85 aa9.41□□□□□ -0.9
SPG7-205ENST00000561945 PRR34Q9NV39 138 aa9.41□□□□□ -0.9
SPG7-205ENST00000561945 VAX2Q9UIW0 290 aa9.41□□□□□ -0.9
SPG7-205ENST00000561945 TMSB15BA0A087X1C1 80 aa9.4□□□□□ -0.9
SPG7-205ENST00000561945 PKIAP61925 76 aa9.4□□□□□ -0.9
SPG7-205ENST00000561945 MIAQ16674 131 aa9.4□□□□□ -0.9
SPG7-205ENST00000561945 DGAT2L7PQ6IED9 249 aa9.4□□□□□ -0.9
SPG7-205ENST00000561945 KRTAP26-1Q6PEX3 210 aa9.4□□□□□ -0.9
SPG7-205ENST00000561945 OR10AG1Q8NH19 301 aa9.4□□□□□ -0.9
SPG7-205ENST00000561945 IFNA1P01562 189 aa9.39□□□□□ -0.91
SPG7-205ENST00000561945 OR5AL1P0C617 328 aa9.39□□□□□ -0.91
SPG7-205ENST00000561945 AKR1C3P42330 323 aa9.39□□□□□ -0.91
SPG7-205ENST00000561945 C9orf163Q8N9P6 203 aa9.39□□□□□ -0.91
SPG7-205ENST00000561945 GNG13Q9P2W3 67 aa9.39□□□□□ -0.91
SPG7-205ENST00000561945 KIF25-AS1Q9Y6Z4 181 aa9.39□□□□□ -0.91
SPG7-205ENST00000561945 USP17L23D6RBM5 183 aa9.38□□□□□ -0.91
SPG7-205ENST00000561945 TMEM262E9PQX1 116 aa9.38□□□□□ -0.91
SPG7-205ENST00000561945 CRPP02741 224 aa9.38□□□□□ -0.91
SPG7-205ENST00000561945 TMEM97Q5BJF2 176 aa9.38□□□□□ -0.91
SPG7-205ENST00000561945 NTM-AS1Q6ZSK4 140 aa9.38□□□□□ -0.91
SPG7-205ENST00000561945 C15orf54Q8N8G6 183 aa9.38□□□□□ -0.91
SPG7-205ENST00000561945 TNXBP22105 4242 aa9.37□□□□□ -0.91
SPG7-205ENST00000561945 PRSS1P07477 247 aa9.37□□□□□ -0.91
SPG7-205ENST00000561945 BLOC1S1P78537 153 aa9.37□□□□□ -0.91
SPG7-205ENST00000561945 CCL20P78556 96 aa9.37□□□□□ -0.91
SPG7-205ENST00000561945 RPL19P84098 196 aaKnown RBP9.37□□□□□ -0.91
SPG7-205ENST00000561945 ZNF56Q15929 161 aa9.37□□□□□ -0.91
SPG7-205ENST00000561945 ANGP03950 147 aaKnown RBP9.36□□□□□ -0.91
SPG7-205ENST00000561945 TAGLN2P37802 199 aaKnown RBP9.36□□□□□ -0.91
SPG7-205ENST00000561945 NKX2-5P52952 324 aaPredicted RBP9.36□□□□□ -0.91
SPG7-205ENST00000561945 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.36□□□□□ -0.91
SPG7-205ENST00000561945 DAZAP1Q96EP5 407 aaKnown RBP9.36□□□□□ -0.91
SPG7-205ENST00000561945 LRP2P98164 4655 aa9.35□□□□□ -0.91
SPG7-205ENST00000561945 HNRNPA3P51991 378 aaKnown RBP9.35□□□□□ -0.91
SPG7-205ENST00000561945 RPL37AP61513 92 aaKnown RBP9.35□□□□□ -0.91
SPG7-205ENST00000561945 CIRBPQ14011 172 aaKnown RBP9.35□□□□□ -0.91
SPG7-205ENST00000561945 ALKAL2Q6UX46 152 aa9.35□□□□□ -0.91
SPG7-205ENST00000561945 CHCHD5Q9BSY4 110 aa9.35□□□□□ -0.91
SPG7-205ENST00000561945 SCO2A0A1W2PP80 73 aa9.34□□□□□ -0.91
SPG7-205ENST00000561945 RBX1P62877 108 aa9.34□□□□□ -0.91
SPG7-205ENST00000561945 IQCJQ1A5X6 159 aa9.34□□□□□ -0.91
SPG7-205ENST00000561945 SDIM1Q6ZPB5 146 aa9.34□□□□□ -0.91
SPG7-205ENST00000561945 BAGE2Q86Y30 109 aa9.34□□□□□ -0.91
SPG7-205ENST00000561945 RNF213Q63HN8 5207 aa9.33□□□□□ -0.92
SPG7-205ENST00000561945 PDE6DO43924 150 aa9.33□□□□□ -0.92
SPG7-205ENST00000561945 HLA-DQA1P01909 254 aa9.33□□□□□ -0.92
SPG7-205ENST00000561945 CNBPP62633 177 aaKnown RBP9.33□□□□□ -0.92
SPG7-205ENST00000561945 MEF2BQ02080 365 aaPredicted RBP9.33□□□□□ -0.92
SPG7-205ENST00000561945 SPANXN1Q5VSR9 72 aa9.33□□□□□ -0.92
SPG7-205ENST00000561945 CLRN3Q8NCR9 226 aa9.33□□□□□ -0.92
SPG7-205ENST00000561945 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.33□□□□□ -0.92
SPG7-205ENST00000561945 TRBV25-1A0A075B6N4 114 aa9.32□□□□□ -0.92
SPG7-205ENST00000561945 PANO1I0J062 215 aa9.32□□□□□ -0.92
SPG7-205ENST00000561945 C11orf52Q96A22 123 aa9.32□□□□□ -0.92
SPG7-205ENST00000561945 AP1S3Q96PC3 154 aa9.32□□□□□ -0.92
SPG7-205ENST00000561945 DERL1Q9BUN8 251 aa9.32□□□□□ -0.92
SPG7-205ENST00000561945 A0A1B0GUV1 79 aa9.31□□□□□ -0.92
SPG7-205ENST00000561945 M0QY20 66 aa9.31□□□□□ -0.92
SPG7-205ENST00000561945 IGLC6P0CF74 106 aa9.31□□□□□ -0.92
SPG7-205ENST00000561945 BCL2P10415 239 aa9.31□□□□□ -0.92
SPG7-205ENST00000561945 RPL35P42766 123 aaKnown RBP9.31□□□□□ -0.92
SPG7-205ENST00000561945 LINC00269Q8N2A0 174 aa9.31□□□□□ -0.92
SPG7-205ENST00000561945 MED9Q9NWA0 146 aa9.31□□□□□ -0.92
SPG7-205ENST00000561945 PLA2G2DQ9UNK4 145 aa9.31□□□□□ -0.92
SPG7-205ENST00000561945 MUC21A0A0G2JKD1 596 aa9.3□□□□□ -0.92
SPG7-205ENST00000561945 MUC21A0A140T8X8 626 aa9.3□□□□□ -0.92
SPG7-205ENST00000561945 F5H697 171 aa9.3□□□□□ -0.92
SPG7-205ENST00000561945 MT1HL1P0DM35 61 aa9.3□□□□□ -0.92
SPG7-205ENST00000561945 TRAV8-4A0A0B4J246 113 aa9.29□□□□□ -0.92
SPG7-205ENST00000561945 IGHV1-24A0A0C4DH33 117 aa9.29□□□□□ -0.92
SPG7-205ENST00000561945 P01737 135 aa9.29□□□□□ -0.92
SPG7-205ENST00000561945 REG3AQ06141 175 aa9.29□□□□□ -0.92
SPG7-205ENST00000561945 GAGE6Q13070 117 aa9.29□□□□□ -0.92
SPG7-205ENST00000561945 C20orf203Q8NBC4 194 aa9.29□□□□□ -0.92
SPG7-205ENST00000561945 H7C1H1 209 aa9.28□□□□□ -0.92
SPG7-205ENST00000561945 SMIM17P0DL12 118 aa9.28□□□□□ -0.92
SPG7-205ENST00000561945 GNG4P50150 75 aa9.28□□□□□ -0.92
SPG7-205ENST00000561945 Q6ZRU5 148 aa9.28□□□□□ -0.92
SPG7-205ENST00000561945 SMIM12Q96EX1 92 aa9.28□□□□□ -0.92
SPG7-205ENST00000561945 PGLYRP4Q96LB8 373 aa9.28□□□□□ -0.92
SPG7-205ENST00000561945 BIN3Q9NQY0 253 aa9.28□□□□□ -0.92
SPG7-205ENST00000561945 C19orf71A6NCJ1 209 aa9.27□□□□□ -0.93
SPG7-205ENST00000561945 GZMBP10144 247 aa9.27□□□□□ -0.93
SPG7-205ENST00000561945 CENPWQ5EE01 88 aa9.27□□□□□ -0.93
SPG7-205ENST00000561945 SUMO4Q6EEV6 95 aa9.27□□□□□ -0.93
SPG7-205ENST00000561945 CLPSL2Q6UWE3 100 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms