RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 GZMBP10144 247 aa8.89□□□□□ -0.99
USB1-205ENST00000561743 GNG4P50150 75 aa8.89□□□□□ -0.99
USB1-205ENST00000561743 ELOBQ15370 118 aa8.89□□□□□ -0.99
USB1-205ENST00000561743 KCNIP4Q6PIL6 250 aa8.89□□□□□ -0.99
USB1-205ENST00000561743 ATRAIDQ6UW56 229 aa8.89□□□□□ -0.99
USB1-205ENST00000561743 AP1S3Q96PC3 154 aa8.89□□□□□ -0.99
USB1-205ENST00000561743 RBFOX3A6NFN3 312 aa8.88□□□□□ -0.99
USB1-205ENST00000561743 PDE6DO43924 150 aa8.88□□□□□ -0.99
USB1-205ENST00000561743 MPV17L2Q567V2 206 aa8.88□□□□□ -0.99
USB1-205ENST00000561743 Q6ZSA8 131 aa8.88□□□□□ -0.99
USB1-205ENST00000561743 FER1L6-AS1Q8NA97 138 aa8.88□□□□□ -0.99
USB1-205ENST00000561743 OR2D3Q8NGH3 330 aa8.88□□□□□ -0.99
USB1-205ENST00000561743 SMIM12Q96EX1 92 aa8.88□□□□□ -0.99
USB1-205ENST00000561743 TPPP3Q9BW30 176 aa8.88□□□□□ -0.99
USB1-205ENST00000561743 TMEM262E9PQX1 116 aa8.87□□□□□ -0.99
USB1-205ENST00000561743 SMIM17P0DL12 118 aa8.87□□□□□ -0.99
USB1-205ENST00000561743 BCL2P10415 239 aa8.87□□□□□ -0.99
USB1-205ENST00000561743 RPS20P60866 119 aaKnown RBP8.87□□□□□ -0.99
USB1-205ENST00000561743 Q0VG73 95 aa8.87□□□□□ -0.99
USB1-205ENST00000561743 ENHOQ6UWT2 76 aa8.87□□□□□ -0.99
USB1-205ENST00000561743 NTM-AS1Q6ZSK4 140 aa8.87□□□□□ -0.99
USB1-205ENST00000561743 SLC51BQ86UW2 128 aa8.87□□□□□ -0.99
USB1-205ENST00000561743 DAZAP1Q96EP5 407 aaKnown RBP8.87□□□□□ -0.99
USB1-205ENST00000561743 VAX2Q9UIW0 290 aa8.87□□□□□ -0.99
USB1-205ENST00000561743 FAM229AH3BQW9 127 aa8.86□□□□□ -0.99
USB1-205ENST00000561743 IFNA1P01562 189 aa8.86□□□□□ -0.99
USB1-205ENST00000561743 LINC01620Q4KN68 170 aa8.86□□□□□ -0.99
USB1-205ENST00000561743 C15orf54Q8N8G6 183 aa8.86□□□□□ -0.99
USB1-205ENST00000561743 Q8N976 141 aa8.86□□□□□ -0.99
USB1-205ENST00000561743 MED9Q9NWA0 146 aa8.86□□□□□ -0.99
USB1-205ENST00000561743 MYCBP2O75592 4640 aa8.85□□□□□ -0.99
USB1-205ENST00000561743 HERC1Q15751 4861 aa8.85□□□□□ -0.99
USB1-205ENST00000561743 M0QY20 66 aa8.85□□□□□ -0.99
USB1-205ENST00000561743 P01737 135 aa8.85□□□□□ -0.99
USB1-205ENST00000561743 MGPP08493 103 aa8.85□□□□□ -0.99
USB1-205ENST00000561743 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.85□□□□□ -0.99
USB1-205ENST00000561743 CHCHD5Q9BSY4 110 aa8.85□□□□□ -0.99
USB1-205ENST00000561743 CRPP02741 224 aa8.84□□□□□ -0.99
USB1-205ENST00000561743 ANGP03950 147 aaKnown RBP8.84□□□□□ -0.99
USB1-205ENST00000561743 CACNG7P62955 275 aa8.84□□□□□ -0.99
USB1-205ENST00000561743 TMEM97Q5BJF2 176 aa8.84□□□□□ -0.99
USB1-205ENST00000561743 SUMO4Q6EEV6 95 aa8.84□□□□□ -0.99
USB1-205ENST00000561743 Q6ZNX1 250 aa8.84□□□□□ -0.99
USB1-205ENST00000561743 C1orf43Q9BWL3 253 aa8.84□□□□□ -0.99
USB1-205ENST00000561743 XKRY2A2RUG3 117 aa8.83□□□□□ -1
USB1-205ENST00000561743 F2Z2F3 143 aa8.83□□□□□ -1
USB1-205ENST00000561743 PKIAP61925 76 aa8.83□□□□□ -1
USB1-205ENST00000561743 LYZL1Q6UWQ5 148 aa8.83□□□□□ -1
USB1-205ENST00000561743 BIN3Q9NQY0 253 aa8.83□□□□□ -1
USB1-205ENST00000561743 DMBT1Q9UGM3 2413 aaPredicted RBP8.83□□□□□ -1
USB1-205ENST00000561743 FLG2Q5D862 2391 aaPredicted RBP8.82□□□□□ -1
USB1-205ENST00000561743 TRBV25-1A0A075B6N4 114 aa8.82□□□□□ -1
USB1-205ENST00000561743 H7C1H1 209 aa8.82□□□□□ -1
USB1-205ENST00000561743 TAGLN2P37802 199 aaKnown RBP8.82□□□□□ -1
USB1-205ENST00000561743 CTRLP40313 264 aa8.82□□□□□ -1
USB1-205ENST00000561743 IQCJQ1A5X6 159 aa8.82□□□□□ -1
USB1-205ENST00000561743 C9orf62Q8N4C0 152 aa8.82□□□□□ -1
USB1-205ENST00000561743 NUDT10Q8NFP7 164 aa8.82□□□□□ -1
USB1-205ENST00000561743 NUDT11Q96G61 164 aa8.82□□□□□ -1
USB1-205ENST00000561743 PRR34Q9NV39 138 aa8.82□□□□□ -1
USB1-205ENST00000561743 K7EN84 100 aa8.81□□□□□ -1
USB1-205ENST00000561743 TRGC1P0CF51 173 aa8.81□□□□□ -1
USB1-205ENST00000561743 NTF3P20783 257 aa8.81□□□□□ -1
USB1-205ENST00000561743 RBX1P62877 108 aa8.81□□□□□ -1
USB1-205ENST00000561743 GAGE6Q13070 117 aa8.81□□□□□ -1
USB1-205ENST00000561743 MIAQ16674 131 aa8.81□□□□□ -1
USB1-205ENST00000561743 IGHV1-24A0A0C4DH33 117 aa8.8□□□□□ -1
USB1-205ENST00000561743 HLA-DQA1P01909 254 aa8.8□□□□□ -1
USB1-205ENST00000561743 NKX2-5P52952 324 aaPredicted RBP8.8□□□□□ -1
USB1-205ENST00000561743 C14orf177Q52M58 125 aa8.8□□□□□ -1
USB1-205ENST00000561743 RASL11AQ6T310 242 aa8.8□□□□□ -1
USB1-205ENST00000561743 CLPSL2Q6UWE3 100 aa8.8□□□□□ -1
USB1-205ENST00000561743 SCXQ7RTU7 201 aa8.8□□□□□ -1
USB1-205ENST00000561743 AKAP14Q86UN6 197 aa8.8□□□□□ -1
USB1-205ENST00000561743 LINC00269Q8N2A0 174 aa8.8□□□□□ -1
USB1-205ENST00000561743 CNFNQ9BYD5 112 aa8.8□□□□□ -1
USB1-205ENST00000561743 RNASE7Q9H1E1 156 aaKnown RBP8.8□□□□□ -1
USB1-205ENST00000561743 DPH3P1Q9H4G8 78 aa8.8□□□□□ -1
USB1-205ENST00000561743 RPP21Q9H633 154 aaKnown RBP8.8□□□□□ -1
USB1-205ENST00000561743 USP17L23D6RBM5 183 aa8.79□□□□□ -1
USB1-205ENST00000561743 WDR73Q6P4I2 378 aa8.79□□□□□ -1
USB1-205ENST00000561743 KRTAP26-1Q6PEX3 210 aa8.79□□□□□ -1
USB1-205ENST00000561743 LINC00528Q8N1L1 170 aa8.79□□□□□ -1
USB1-205ENST00000561743 OCC1Q8TAD7 63 aa8.79□□□□□ -1
USB1-205ENST00000561743 hCG_2014768A0A024R1R8 64 aa8.78□□□□□ -1
USB1-205ENST00000561743 ALKAL2Q6UX46 152 aa8.78□□□□□ -1
USB1-205ENST00000561743 CHAC1Q9BUX1 264 aa8.78□□□□□ -1
USB1-205ENST00000561743 NIT2Q9NQR4 276 aa8.78□□□□□ -1
USB1-205ENST00000561743 PLA2G1BP04054 148 aaKnown RBP8.77□□□□□ -1.01
USB1-205ENST00000561743 TWIST1Q15672 202 aa8.77□□□□□ -1.01
USB1-205ENST00000561743 C20orf203Q8NBC4 194 aa8.77□□□□□ -1.01
USB1-205ENST00000561743 PGLYRP4Q96LB8 373 aa8.77□□□□□ -1.01
USB1-205ENST00000561743 TMEM243Q9BU79 118 aa8.77□□□□□ -1.01
USB1-205ENST00000561743 TMEM250H0YL14 139 aa8.76□□□□□ -1.01
USB1-205ENST00000561743 PRSS1P07477 247 aa8.76□□□□□ -1.01
USB1-205ENST00000561743 BLOC1S1P78537 153 aa8.76□□□□□ -1.01
USB1-205ENST00000561743 REG3AQ06141 175 aa8.76□□□□□ -1.01
USB1-205ENST00000561743 LYPD6BQ8NI32 183 aa8.76□□□□□ -1.01
USB1-205ENST00000561743 CIRBP-AS1Q8TBR5 109 aa8.76□□□□□ -1.01
USB1-205ENST00000561743 DEFB104AQ8WTQ1 72 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms