RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 S100A3P33764 101 aa-0.28□□□□□ -2.45
HMBOX1-216ENST00000561377 GNG10P50151 68 aa-0.28□□□□□ -2.45
HMBOX1-216ENST00000561377 EDDM3BP56851 147 aa-0.28□□□□□ -2.45
HMBOX1-216ENST00000561377 NPC2P61916 151 aa-0.28□□□□□ -2.45
HMBOX1-216ENST00000561377 CCDC153Q494R4 210 aa-0.28□□□□□ -2.45
HMBOX1-216ENST00000561377 SMIM15Q7Z3B0 74 aa-0.28□□□□□ -2.45
HMBOX1-216ENST00000561377 CTAGE3PQ8IX95 158 aa-0.28□□□□□ -2.45
HMBOX1-216ENST00000561377 Q8IZM0 81 aa-0.28□□□□□ -2.45
HMBOX1-216ENST00000561377 VSTM2AQ8TAG5 236 aa-0.28□□□□□ -2.45
HMBOX1-216ENST00000561377 TNXBP22105 4242 aa-0.28□□□□□ -2.45
HMBOX1-216ENST00000561377 NRXN2Q9P2S2 1712 aa-0.28□□□□□ -2.45
HMBOX1-216ENST00000561377 PBRM1Q86U86 1689 aa-0.28□□□□□ -2.45
HMBOX1-216ENST00000561377 ACANP16112 2415 aa-0.28□□□□□ -2.45
HMBOX1-216ENST00000561377 OVOS2A0A0J9YW53 1432 aa-0.29□□□□□ -2.46
HMBOX1-216ENST00000561377 OVOS2Q6IE36 1432 aa-0.29□□□□□ -2.46
HMBOX1-216ENST00000561377 PHIPQ8WWQ0 1821 aa-0.29□□□□□ -2.46
HMBOX1-216ENST00000561377 KIAA0100Q14667 2235 aaKnown RBP-0.29□□□□□ -2.46
HMBOX1-216ENST00000561377 IBTKQ9P2D0 1353 aaPredicted RBP-0.29□□□□□ -2.46
HMBOX1-216ENST00000561377 TMEM2Q9UHN6 1383 aa-0.29□□□□□ -2.46
HMBOX1-216ENST00000561377 SPTA1P02549 2419 aa-0.29□□□□□ -2.46
HMBOX1-216ENST00000561377 EP300Q09472 2414 aaPredicted RBP-0.29□□□□□ -2.46
HMBOX1-216ENST00000561377 G3V318 75 aa-0.29□□□□□ -2.46
HMBOX1-216ENST00000561377 G0S2P27469 103 aa-0.29□□□□□ -2.46
HMBOX1-216ENST00000561377 SPRR1AP35321 89 aa-0.29□□□□□ -2.46
HMBOX1-216ENST00000561377 SPRR2BP35325 72 aa-0.29□□□□□ -2.46
HMBOX1-216ENST00000561377 UBE2D1P51668 147 aa-0.29□□□□□ -2.46
HMBOX1-216ENST00000561377 NCS1P62166 190 aa-0.29□□□□□ -2.46
HMBOX1-216ENST00000561377 MORN2Q502X0 79 aa-0.29□□□□□ -2.46
HMBOX1-216ENST00000561377 CLLU1Q5K131 121 aa-0.29□□□□□ -2.46
HMBOX1-216ENST00000561377 LINC01545Q5VT33 79 aa-0.29□□□□□ -2.46
HMBOX1-216ENST00000561377 ZNF818PQ6ZRF7 136 aa-0.29□□□□□ -2.46
HMBOX1-216ENST00000561377 MMGT1Q8N4V1 131 aa-0.29□□□□□ -2.46
HMBOX1-216ENST00000561377 WFDC6Q9BQY6 131 aa-0.29□□□□□ -2.46
HMBOX1-216ENST00000561377 RPRMQ9NS64 109 aa-0.29□□□□□ -2.46
HMBOX1-216ENST00000561377 GINS2Q9Y248 185 aa-0.29□□□□□ -2.46
HMBOX1-216ENST00000561377 AKAP11Q9UKA4 1901 aa-0.29□□□□□ -2.46
HMBOX1-216ENST00000561377 MAP1BP46821 2468 aaKnown RBP-0.29□□□□□ -2.46
HMBOX1-216ENST00000561377 ERCC6Q03468 1493 aa-0.29□□□□□ -2.46
HMBOX1-216ENST00000561377 CASZ1Q86V15 1759 aa-0.29□□□□□ -2.46
HMBOX1-216ENST00000561377 A6NIN4 97 aa-0.3□□□□□ -2.46
HMBOX1-216ENST00000561377 TNFSF15O95150 251 aa-0.3□□□□□ -2.46
HMBOX1-216ENST00000561377 NCR2O95944 276 aa-0.3□□□□□ -2.46
HMBOX1-216ENST00000561377 MT-ND4LP03901 98 aa-0.3□□□□□ -2.46
HMBOX1-216ENST00000561377 TFF1P04155 84 aa-0.3□□□□□ -2.46
HMBOX1-216ENST00000561377 PRM1P04553 51 aa-0.3□□□□□ -2.46
HMBOX1-216ENST00000561377 FABP1P07148 127 aa-0.3□□□□□ -2.46
HMBOX1-216ENST00000561377 CMPK1P30085 196 aa-0.3□□□□□ -2.46
HMBOX1-216ENST00000561377 SPAG11BQ08648 103 aa-0.3□□□□□ -2.46
HMBOX1-216ENST00000561377 C9orf116Q5BN46 136 aaPredicted RBP-0.3□□□□□ -2.46
HMBOX1-216ENST00000561377 RPL7L1Q6DKI1 246 aaKnown RBP-0.3□□□□□ -2.46
HMBOX1-216ENST00000561377 BAGE3Q86Y29 109 aa-0.3□□□□□ -2.46
HMBOX1-216ENST00000561377 MRPL40Q9NQ50 206 aaKnown RBP-0.3□□□□□ -2.46
HMBOX1-216ENST00000561377 NDUFA12Q9UI09 145 aa-0.3□□□□□ -2.46
HMBOX1-216ENST00000561377 HIGD1AQ9Y241 93 aa-0.3□□□□□ -2.46
HMBOX1-216ENST00000561377 LSM2Q9Y333 95 aaKnown RBP-0.3□□□□□ -2.46
HMBOX1-216ENST00000561377 SPTBN1Q01082 2364 aaKnown RBP-0.3□□□□□ -2.46
HMBOX1-216ENST00000561377 FLNBO75369 2602 aaKnown RBP-0.3□□□□□ -2.46
HMBOX1-216ENST00000561377 ATRQ13535 2644 aa-0.3□□□□□ -2.46
HMBOX1-216ENST00000561377 BSNQ9UPA5 3926 aa-0.3□□□□□ -2.46
HMBOX1-216ENST00000561377 LRRC37A2A6NM11 1700 aa-0.3□□□□□ -2.46
HMBOX1-216ENST00000561377 DISP2A7MBM2 1401 aa-0.3□□□□□ -2.46
HMBOX1-216ENST00000561377 CREBBPQ92793 2442 aa-0.3□□□□□ -2.46
HMBOX1-216ENST00000561377 DOCK11Q5JSL3 2073 aa-0.31□□□□□ -2.46
HMBOX1-216ENST00000561377 KIF13AQ9H1H9 1805 aa-0.31□□□□□ -2.46
HMBOX1-216ENST00000561377 ADGRB1O14514 1584 aa-0.31□□□□□ -2.46
HMBOX1-216ENST00000561377 NPFFO15130 113 aa-0.31□□□□□ -2.46
HMBOX1-216ENST00000561377 PIPP12273 146 aaPredicted RBP-0.31□□□□□ -2.46
HMBOX1-216ENST00000561377 DCDP81605 110 aaKnown RBP-0.31□□□□□ -2.46
HMBOX1-216ENST00000561377 KRTAP19-7Q3SYF9 63 aa-0.31□□□□□ -2.46
HMBOX1-216ENST00000561377 CFAP126Q5VTH2 177 aa-0.31□□□□□ -2.46
HMBOX1-216ENST00000561377 TMEM244Q5VVB8 128 aa-0.31□□□□□ -2.46
HMBOX1-216ENST00000561377 SMIM4Q8WVI0 70 aa-0.31□□□□□ -2.46
HMBOX1-216ENST00000561377 IFT172Q9UG01 1749 aa-0.31□□□□□ -2.46
HMBOX1-216ENST00000561377 NF1P21359 2839 aa-0.31□□□□□ -2.46
HMBOX1-216ENST00000561377 GVINP1Q7Z2Y8 2422 aa-0.32□□□□□ -2.46
HMBOX1-216ENST00000561377 WNK1Q9H4A3 2382 aa-0.32□□□□□ -2.46
HMBOX1-216ENST00000561377 ZMYM4Q5VZL5 1548 aa-0.32□□□□□ -2.46
HMBOX1-216ENST00000561377 PIGBOS1A0A0B4J2F0 54 aa-0.32□□□□□ -2.46
HMBOX1-216ENST00000561377 FAM92AA1XBS5 289 aa-0.32□□□□□ -2.46
HMBOX1-216ENST00000561377 CLPSL1A2RUU4 121 aa-0.32□□□□□ -2.46
HMBOX1-216ENST00000561377 PIRTP0C851 137 aa-0.32□□□□□ -2.46
HMBOX1-216ENST00000561377 CBLN1P23435 193 aa-0.32□□□□□ -2.46
HMBOX1-216ENST00000561377 S100A5P33763 92 aa-0.32□□□□□ -2.46
HMBOX1-216ENST00000561377 CCL8P80075 99 aa-0.32□□□□□ -2.46
HMBOX1-216ENST00000561377 HIST1H1AQ02539 215 aaPredicted RBP-0.32□□□□□ -2.46
HMBOX1-216ENST00000561377 PIGYQ3MUY2 71 aa-0.32□□□□□ -2.46
HMBOX1-216ENST00000561377 SCIMPQ6UWF3 145 aa-0.32□□□□□ -2.46
HMBOX1-216ENST00000561377 MAFIPQ8WZ33 124 aa-0.32□□□□□ -2.46
HMBOX1-216ENST00000561377 TP53AIP1Q9HCN2 124 aa-0.32□□□□□ -2.46
HMBOX1-216ENST00000561377 SCN3BQ9NY72 215 aa-0.32□□□□□ -2.46
HMBOX1-216ENST00000561377 PARP14Q460N5 1801 aa-0.32□□□□□ -2.46
HMBOX1-216ENST00000561377 C10orf71Q711Q0 1435 aa-0.32□□□□□ -2.46
HMBOX1-216ENST00000561377 CHD8Q9HCK8 2581 aa-0.33□□□□□ -2.46
HMBOX1-216ENST00000561377 IFT140Q96RY7 1462 aa-0.33□□□□□ -2.46
HMBOX1-216ENST00000561377 WDR7Q9Y4E6 1490 aa-0.33□□□□□ -2.46
HMBOX1-216ENST00000561377 LRP6O75581 1613 aa-0.33□□□□□ -2.46
HMBOX1-216ENST00000561377 GNG14A0A1W2PPG7 69 aa-0.33□□□□□ -2.46
HMBOX1-216ENST00000561377 K7EQZ3 153 aa-0.33□□□□□ -2.46
HMBOX1-216ENST00000561377 TSPAN19P0C672 248 aa-0.33□□□□□ -2.46
HMBOX1-216ENST00000561377 NBEAP1P0C6P0 100 aa-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms