RNA–Protein interactions for RNA: ENST00000561091.1

SHF-209, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5

Gene SHF, Length 577 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-209ENST00000561091 RPL39LQ96EH5 51 aaKnown RBP11.08□□□□□ -0.64
SHF-209ENST00000561091 TRBV10-1A0A0K0K1A3 114 aa11.07□□□□□ -0.64
SHF-209ENST00000561091 H7C1H1 209 aa11.07□□□□□ -0.64
SHF-209ENST00000561091 MRPL23Q16540 153 aaKnown RBP11.07□□□□□ -0.64
SHF-209ENST00000561091 TRBV24-1A0A075B6N3 115 aa11.06□□□□□ -0.64
SHF-209ENST00000561091 LINC00694P0DN24 101 aa11.06□□□□□ -0.64
SHF-209ENST00000561091 SRIP30626 198 aa11.06□□□□□ -0.64
SHF-209ENST00000561091 RPL36AP83881 106 aaKnown RBP11.06□□□□□ -0.64
SHF-209ENST00000561091 RPL36ALQ969Q0 106 aaKnown RBP11.06□□□□□ -0.64
SHF-209ENST00000561091 MRAP2Q96G30 205 aa11.06□□□□□ -0.64
SHF-209ENST00000561091 RPS10P46783 165 aaKnown RBP11.05□□□□□ -0.64
SHF-209ENST00000561091 TCTAP57738 103 aa11.05□□□□□ -0.64
SHF-209ENST00000561091 NIT2Q9NQR4 276 aa11.05□□□□□ -0.64
SHF-209ENST00000561091 TRBV7-3A0A075B6L6 115 aa11.04□□□□□ -0.64
SHF-209ENST00000561091 CKS2P33552 79 aa11.04□□□□□ -0.64
SHF-209ENST00000561091 OR10J3Q5JRS4 329 aa11.04□□□□□ -0.64
SHF-209ENST00000561091 NEGR1Q7Z3B1 354 aa11.04□□□□□ -0.64
SHF-209ENST00000561091 ATP6V0E2Q8NHE4 81 aa11.04□□□□□ -0.64
SHF-209ENST00000561091 FRZBQ92765 325 aa11.04□□□□□ -0.64
SHF-209ENST00000561091 GNB1LQ9BYB4 327 aa11.04□□□□□ -0.64
SHF-209ENST00000561091 TNFRSF18Q9Y5U5 241 aa11.04□□□□□ -0.64
SHF-209ENST00000561091 IGHV3-38A0A0C4DH36 116 aa11.03□□□□□ -0.64
SHF-209ENST00000561091 D6R8Y8 96 aa11.03□□□□□ -0.64
SHF-209ENST00000561091 HLA-DQA1P01909 254 aa11.03□□□□□ -0.64
SHF-209ENST00000561091 UBE2D3P61077 147 aa11.03□□□□□ -0.64
SHF-209ENST00000561091 UBE2D2P62837 147 aa11.03□□□□□ -0.64
SHF-209ENST00000561091 NRACQ8N912 160 aa11.03□□□□□ -0.64
SHF-209ENST00000561091 DNAJC30Q96LL9 226 aa11.03□□□□□ -0.64
SHF-209ENST00000561091 DNAH7Q8WXX0 4024 aa11.03□□□□□ -0.64
SHF-209ENST00000561091 CSMD3Q7Z407 3707 aa11.03□□□□□ -0.64
SHF-209ENST00000561091 APCSP02743 223 aa11.02□□□□□ -0.65
SHF-209ENST00000561091 ESRGQ1W209 222 aa11.02□□□□□ -0.65
SHF-209ENST00000561091 KIAA1644Q3SXP7 199 aa11.02□□□□□ -0.65
SHF-209ENST00000561091 COX19Q49B96 90 aa11.02□□□□□ -0.65
SHF-209ENST00000561091 MRPL18Q9H0U6 180 aaKnown RBP11.02□□□□□ -0.65
SHF-209ENST00000561091 LYPD5Q6UWN5 251 aa11.01□□□□□ -0.65
SHF-209ENST00000561091 SH2D6Q7Z4S9 175 aa11.01□□□□□ -0.65
SHF-209ENST00000561091 DEFB104AQ8WTQ1 72 aa11.01□□□□□ -0.65
SHF-209ENST00000561091 COLCA2A8K830 154 aa11□□□□□ -0.65
SHF-209ENST00000561091 NPYP01303 97 aa11□□□□□ -0.65
SHF-209ENST00000561091 MT-ND6P03923 174 aa11□□□□□ -0.65
SHF-209ENST00000561091 ORMDL3Q8N138 153 aa11□□□□□ -0.65
SHF-209ENST00000561091 PRELID3AQ96N28 172 aa11□□□□□ -0.65
SHF-209ENST00000561091 LINC00588Q9Y4M8 146 aa11□□□□□ -0.65
SHF-209ENST00000561091 TRAPPC1Q9Y5R8 145 aa11□□□□□ -0.65
SHF-209ENST00000561091 TENM2Q9NT68 2774 aa10.99□□□□□ -0.65
SHF-209ENST00000561091 TRBV6-5A0A0K0K1A5 114 aa10.99□□□□□ -0.65
SHF-209ENST00000561091 TNFRSF6BO95407 300 aa10.99□□□□□ -0.65
SHF-209ENST00000561091 PPBPP02775 128 aa10.99□□□□□ -0.65
SHF-209ENST00000561091 FABP9Q0Z7S8 132 aa10.99□□□□□ -0.65
SHF-209ENST00000561091 GTSF1LQ9H1H1 148 aa10.99□□□□□ -0.65
SHF-209ENST00000561091 ST20Q9HBF5 79 aa10.99□□□□□ -0.65
SHF-209ENST00000561091 SDHAF1A6NFY7 115 aa10.98□□□□□ -0.65
SHF-209ENST00000561091 CCL18P55774 89 aa10.98□□□□□ -0.65
SHF-209ENST00000561091 UBE2DNLQ8IWF7 75 aa10.98□□□□□ -0.65
SHF-209ENST00000561091 PPP1R17O96001 155 aa10.97□□□□□ -0.65
SHF-209ENST00000561091 SUMO2P61956 95 aaKnown RBP10.97□□□□□ -0.65
SHF-209ENST00000561091 DAZ4Q86SG3 579 aaKnown RBP10.97□□□□□ -0.65
SHF-209ENST00000561091 TMEM70Q9BUB7 260 aa10.97□□□□□ -0.65
SHF-209ENST00000561091 DAZ3Q9NR90 486 aaKnown RBP10.97□□□□□ -0.65
SHF-209ENST00000561091 STARD9Q9P2P6 4700 aa10.96□□□□□ -0.65
SHF-209ENST00000561091 POLR2KP53803 58 aaKnown RBP10.96□□□□□ -0.65
SHF-209ENST00000561091 NTM-AS1Q6ZSK4 140 aa10.96□□□□□ -0.65
SHF-209ENST00000561091 MRPS16Q9Y3D3 137 aaKnown RBP10.96□□□□□ -0.65
SHF-209ENST00000561091 LY6G6CO95867 125 aa10.95□□□□□ -0.66
SHF-209ENST00000561091 RAB5AP20339 215 aa10.95□□□□□ -0.66
SHF-209ENST00000561091 PMCHP20382 165 aa10.95□□□□□ -0.66
SHF-209ENST00000561091 TIRAPP58753 221 aa10.95□□□□□ -0.66
SHF-209ENST00000561091 LGALS9CQ6DKI2 356 aa10.95□□□□□ -0.66
SHF-209ENST00000561091 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.95□□□□□ -0.66
SHF-209ENST00000561091 LINC00476Q8WZB0 136 aa10.95□□□□□ -0.66
SHF-209ENST00000561091 C20orf78Q9BR46 151 aa10.95□□□□□ -0.66
SHF-209ENST00000561091 ALKBH7Q9BT30 221 aaPredicted RBP10.95□□□□□ -0.66
SHF-209ENST00000561091 LOC389332A0A1B0GUA5 103 aa10.94□□□□□ -0.66
SHF-209ENST00000561091 PHOX2AO14813 284 aa10.94□□□□□ -0.66
SHF-209ENST00000561091 LELP1Q5T871 98 aa10.94□□□□□ -0.66
SHF-209ENST00000561091 LAMTOR2Q9Y2Q5 125 aa10.94□□□□□ -0.66
SHF-209ENST00000561091 TRBV6-8A0A0A6YYG3 113 aa10.93□□□□□ -0.66
SHF-209ENST00000561091 I3L3M4 83 aa10.93□□□□□ -0.66
SHF-209ENST00000561091 TSHBP01222 138 aa10.93□□□□□ -0.66
SHF-209ENST00000561091 COTL1Q14019 142 aa10.93□□□□□ -0.66
SHF-209ENST00000561091 WFDC10BQ8IUB3 73 aa10.93□□□□□ -0.66
SHF-209ENST00000561091 SMIM2Q9BVW6 85 aa10.93□□□□□ -0.66
SHF-209ENST00000561091 MAP1LC3AQ9H492 121 aa10.93□□□□□ -0.66
SHF-209ENST00000561091 DYNC2H1Q8NCM8 4307 aaKnown RBP10.93□□□□□ -0.66
SHF-209ENST00000561091 TRBV27A0A0K0K1C4 114 aa10.92□□□□□ -0.66
SHF-209ENST00000561091 VCYO14598 125 aa10.92□□□□□ -0.66
SHF-209ENST00000561091 TRGC2P03986 189 aa10.92□□□□□ -0.66
SHF-209ENST00000561091 RPL32P62910 135 aaKnown RBP10.91□□□□□ -0.66
SHF-209ENST00000561091 TMEM97Q5BJF2 176 aa10.91□□□□□ -0.66
SHF-209ENST00000561091 UPK3BQ9BT76 320 aa10.91□□□□□ -0.66
SHF-209ENST00000561091 IGLV2-18A0A075B6J9 118 aa10.9□□□□□ -0.66
SHF-209ENST00000561091 TRAV8-6A0A0B4J262 113 aa10.9□□□□□ -0.66
SHF-209ENST00000561091 IGHV1-24A0A0C4DH33 117 aa10.9□□□□□ -0.66
SHF-209ENST00000561091 PRSS47A8MTI9 375 aa10.9□□□□□ -0.66
SHF-209ENST00000561091 AMTP48728 403 aa10.9□□□□□ -0.66
SHF-209ENST00000561091 IQCJQ1A5X6 159 aa10.9□□□□□ -0.66
SHF-209ENST00000561091 TRBV25-1A0A075B6N4 114 aa10.89□□□□□ -0.67
SHF-209ENST00000561091 LCE6AA0A183 80 aa10.89□□□□□ -0.67
SHF-209ENST00000561091 TCAPO15273 167 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms