RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 RPUSD1Q9UJJ7 312 aaKnown RBP4.97□□□□□ -1.61
TSPAN3-209ENST00000560715 EP300Q09472 2414 aaPredicted RBP4.96□□□□□ -1.61
TSPAN3-209ENST00000560715 IGHV3OR16-13A0A075B7E8 117 aa4.96□□□□□ -1.62
TSPAN3-209ENST00000560715 E7EUB6 86 aa4.96□□□□□ -1.62
TSPAN3-209ENST00000560715 H7C2G1 150 aa4.96□□□□□ -1.62
TSPAN3-209ENST00000560715 Q1RN00 199 aa4.96□□□□□ -1.62
TSPAN3-209ENST00000560715 IGFL3Q6UXB1 125 aa4.96□□□□□ -1.62
TSPAN3-209ENST00000560715 CD177Q8N6Q3 437 aa4.96□□□□□ -1.62
TSPAN3-209ENST00000560715 NRACQ8N912 160 aa4.96□□□□□ -1.62
TSPAN3-209ENST00000560715 KLF14Q8TD94 323 aaPredicted RBP4.96□□□□□ -1.62
TSPAN3-209ENST00000560715 TOMM6Q96B49 74 aa4.96□□□□□ -1.62
TSPAN3-209ENST00000560715 CELSR3Q9NYQ7 3312 aa4.96□□□□□ -1.62
TSPAN3-209ENST00000560715 TRAV13-1A0A0B4J241 112 aa4.96□□□□□ -1.62
TSPAN3-209ENST00000560715 TRAV41A0A0B4J266 112 aa4.96□□□□□ -1.62
TSPAN3-209ENST00000560715 PLGLAQ15195 96 aa4.96□□□□□ -1.62
TSPAN3-209ENST00000560715 RUSC1-AS1Q66K80 236 aa4.96□□□□□ -1.62
TSPAN3-209ENST00000560715 SDIM1Q6ZPB5 146 aa4.96□□□□□ -1.62
TSPAN3-209ENST00000560715 ZNF575Q86XF7 245 aa4.96□□□□□ -1.62
TSPAN3-209ENST00000560715 SMCR5Q8TEV8 140 aa4.96□□□□□ -1.62
TSPAN3-209ENST00000560715 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.95□□□□□ -1.62
TSPAN3-209ENST00000560715 IQCF6A8MYZ5 107 aa4.95□□□□□ -1.62
TSPAN3-209ENST00000560715 PFN2P35080 140 aa4.95□□□□□ -1.62
TSPAN3-209ENST00000560715 IGHV4OR15-8A0A075B7B6 117 aa4.95□□□□□ -1.62
TSPAN3-209ENST00000560715 LYZL6O75951 148 aa4.95□□□□□ -1.62
TSPAN3-209ENST00000560715 IGKV3-15P01624 115 aa4.95□□□□□ -1.62
TSPAN3-209ENST00000560715 INAFM2P0DMQ5 153 aa4.95□□□□□ -1.62
TSPAN3-209ENST00000560715 CNEP1R1Q8N9A8 125 aa4.95□□□□□ -1.62
TSPAN3-209ENST00000560715 C9orf106Q8NAJ2 232 aa4.95□□□□□ -1.62
TSPAN3-209ENST00000560715 SHANK2-AS3Q9BTD1 123 aa4.95□□□□□ -1.62
TSPAN3-209ENST00000560715 CEP250Q9BV73 2442 aa4.95□□□□□ -1.62
TSPAN3-209ENST00000560715 ZFHX4Q86UP3 3567 aa4.95□□□□□ -1.62
TSPAN3-209ENST00000560715 CGB3P0DN86 165 aa4.94□□□□□ -1.62
TSPAN3-209ENST00000560715 CGB7P0DN87 165 aa4.94□□□□□ -1.62
TSPAN3-209ENST00000560715 LYZP61626 148 aa4.94□□□□□ -1.62
TSPAN3-209ENST00000560715 ERCC8Q13216 396 aa4.94□□□□□ -1.62
TSPAN3-209ENST00000560715 ORMDL2Q53FV1 153 aa4.94□□□□□ -1.62
TSPAN3-209ENST00000560715 FAM19A3Q7Z5A8 133 aa4.94□□□□□ -1.62
TSPAN3-209ENST00000560715 UPK3BQ9BT76 320 aa4.94□□□□□ -1.62
TSPAN3-209ENST00000560715 AGPAT4-IT1Q9H0P7 198 aa4.94□□□□□ -1.62
TSPAN3-209ENST00000560715 TNCP24821 2201 aa4.94□□□□□ -1.62
TSPAN3-209ENST00000560715 TMEM223A0PJW6 202 aa4.94□□□□□ -1.62
TSPAN3-209ENST00000560715 NDUFS5O43920 106 aa4.94□□□□□ -1.62
TSPAN3-209ENST00000560715 PRSS2P07478 247 aa4.94□□□□□ -1.62
TSPAN3-209ENST00000560715 LY6LH3BQJ8 138 aa4.94□□□□□ -1.62
TSPAN3-209ENST00000560715 M0R3E3 92 aa4.94□□□□□ -1.62
TSPAN3-209ENST00000560715 PRB4P10163 310 aaPredicted RBP4.94□□□□□ -1.62
TSPAN3-209ENST00000560715 C17orf58Q2M2W7 97 aa4.94□□□□□ -1.62
TSPAN3-209ENST00000560715 C14orf178Q8N769 122 aaPredicted RBP4.94□□□□□ -1.62
TSPAN3-209ENST00000560715 TMEM167AQ8TBQ9 72 aa4.94□□□□□ -1.62
TSPAN3-209ENST00000560715 AMELXQ99217 191 aa4.94□□□□□ -1.62
TSPAN3-209ENST00000560715 DPH3P1Q9H4G8 78 aa4.94□□□□□ -1.62
TSPAN3-209ENST00000560715 SLC25A15Q9Y619 301 aa4.94□□□□□ -1.62
TSPAN3-209ENST00000560715 PLAC8L1A1L4L8 177 aa4.93□□□□□ -1.62
TSPAN3-209ENST00000560715 PRAC2D3DTV9 90 aa4.93□□□□□ -1.62
TSPAN3-209ENST00000560715 J3QQQ9 107 aa4.93□□□□□ -1.62
TSPAN3-209ENST00000560715 IGLV1-44P01699 117 aa4.93□□□□□ -1.62
TSPAN3-209ENST00000560715 TSPEAR-AS2P59090 65 aa4.93□□□□□ -1.62
TSPAN3-209ENST00000560715 CCL8P80075 99 aa4.93□□□□□ -1.62
TSPAN3-209ENST00000560715 SMIM2Q9BVW6 85 aa4.93□□□□□ -1.62
TSPAN3-209ENST00000560715 KMT2BQ9UMN6 2715 aaPredicted RBP4.93□□□□□ -1.62
TSPAN3-209ENST00000560715 ZNF80P51504 273 aaPredicted RBP4.93□□□□□ -1.62
TSPAN3-209ENST00000560715 C10orf55Q5SWW7 151 aa4.93□□□□□ -1.62
TSPAN3-209ENST00000560715 SPENQ96T58 3664 aaKnown RBP4.93□□□□□ -1.62
TSPAN3-209ENST00000560715 NCOR2Q9Y618 2525 aa4.92□□□□□ -1.62
TSPAN3-209ENST00000560715 INTS1Q8N201 2190 aaKnown RBP4.92□□□□□ -1.62
TSPAN3-209ENST00000560715 CACNA1GO43497 2377 aa4.92□□□□□ -1.62
TSPAN3-209ENST00000560715 IGLV4-69A0A075B6H9 119 aa4.92□□□□□ -1.62
TSPAN3-209ENST00000560715 IGKV1D-17A0A075B6S4 117 aa4.92□□□□□ -1.62
TSPAN3-209ENST00000560715 TRBV7-1A0A0A6YYK4 115 aa4.92□□□□□ -1.62
TSPAN3-209ENST00000560715 C11orf86A6NJI1 115 aa4.92□□□□□ -1.62
TSPAN3-209ENST00000560715 LST1O00453 97 aa4.92□□□□□ -1.62
TSPAN3-209ENST00000560715 COX6CP09669 75 aa4.92□□□□□ -1.62
TSPAN3-209ENST00000560715 C6orf99Q4VX62 202 aa4.92□□□□□ -1.62
TSPAN3-209ENST00000560715 MUSTN1Q8IVN3 82 aa4.92□□□□□ -1.62
TSPAN3-209ENST00000560715 SERP2Q8N6R1 65 aa4.92□□□□□ -1.62
TSPAN3-209ENST00000560715 ICOSQ9Y6W8 199 aa4.92□□□□□ -1.62
TSPAN3-209ENST00000560715 TRAV26-2A0A0B4J265 109 aa4.92□□□□□ -1.62
TSPAN3-209ENST00000560715 TRGV3P03979 118 aa4.92□□□□□ -1.62
TSPAN3-209ENST00000560715 PDE6HQ13956 83 aa4.92□□□□□ -1.62
TSPAN3-209ENST00000560715 FAM216BQ8N7L0 139 aa4.92□□□□□ -1.62
TSPAN3-209ENST00000560715 DCANP1Q8TF63 244 aa4.92□□□□□ -1.62
TSPAN3-209ENST00000560715 XCL2Q9UBD3 114 aa4.92□□□□□ -1.62
TSPAN3-209ENST00000560715 IGHV1-18A0A0C4DH31 117 aa4.91□□□□□ -1.62
TSPAN3-209ENST00000560715 H3BRN7 92 aa4.91□□□□□ -1.62
TSPAN3-209ENST00000560715 LINC01547P58512 204 aaPredicted RBP4.91□□□□□ -1.62
TSPAN3-209ENST00000560715 C2orf66Q6UXQ4 117 aa4.91□□□□□ -1.62
TSPAN3-209ENST00000560715 CLEC19AQ6UXS0 136 aa4.91□□□□□ -1.62
TSPAN3-209ENST00000560715 LOC400499M0QZD8 3231 aa4.91□□□□□ -1.62
TSPAN3-209ENST00000560715 ASPMQ8IZT6 3477 aa4.91□□□□□ -1.62
TSPAN3-209ENST00000560715 HCP5Q6MZN7 132 aa4.91□□□□□ -1.62
TSPAN3-209ENST00000560715 C10orf105Q8TEF2 133 aa4.91□□□□□ -1.62
TSPAN3-209ENST00000560715 IGKV2-40A0A087WW87 121 aaPredicted RBP4.9□□□□□ -1.62
TSPAN3-209ENST00000560715 A0A0J9YXV3 536 aa4.9□□□□□ -1.62
TSPAN3-209ENST00000560715 NDUFC2-KCTD14E9PQ53 114 aa4.9□□□□□ -1.62
TSPAN3-209ENST00000560715 H0Y9J4 135 aa4.9□□□□□ -1.62
TSPAN3-209ENST00000560715 IGKV2D-40P01614 121 aaPredicted RBP4.9□□□□□ -1.62
TSPAN3-209ENST00000560715 LGALS3P17931 250 aaKnown RBP4.9□□□□□ -1.62
TSPAN3-209ENST00000560715 RHOHQ15669 191 aa4.9□□□□□ -1.62
TSPAN3-209ENST00000560715 ZNF833PQ6ZTB9 187 aa4.9□□□□□ -1.62
TSPAN3-209ENST00000560715 CACNA1BQ00975 2339 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms