RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 NDUFA11Q86Y39 141 aa13.07□□□□□ -0.32
TRPM1-211ENST00000560658 ZNRF2Q8NHG8 242 aa13.07□□□□□ -0.32
TRPM1-211ENST00000560658 SPAG8Q99932 426 aaPredicted RBP13.07□□□□□ -0.32
TRPM1-211ENST00000560658 TRAV12-2A0A075B6T6 113 aa13.06□□□□□ -0.32
TRPM1-211ENST00000560658 KLHL30-AS1Q8NEE0 82 aa13.06□□□□□ -0.32
TRPM1-211ENST00000560658 SIGMAR1Q99720 223 aa13.06□□□□□ -0.32
TRPM1-211ENST00000560658 MUC4Q99102 2169 aa13.06□□□□□ -0.32
TRPM1-211ENST00000560658 TSPAN13O95857 204 aa13.06□□□□□ -0.32
TRPM1-211ENST00000560658 SPATA25Q9BR10 227 aa13.06□□□□□ -0.32
TRPM1-211ENST00000560658 ZNF702PQ9H963 129 aa13.06□□□□□ -0.32
TRPM1-211ENST00000560658 PEMTQ9UBM1 199 aa13.06□□□□□ -0.32
TRPM1-211ENST00000560658 SPTBN1Q01082 2364 aaKnown RBP13.05□□□□□ -0.32
TRPM1-211ENST00000560658 AMELXQ99217 191 aa13.05□□□□□ -0.32
TRPM1-211ENST00000560658 MED13LQ71F56 2210 aa13.05□□□□□ -0.32
TRPM1-211ENST00000560658 RHODO00212 210 aa13.04□□□□□ -0.32
TRPM1-211ENST00000560658 TGFAP01135 160 aa13.04□□□□□ -0.32
TRPM1-211ENST00000560658 IGKV3-20P01619 116 aa13.04□□□□□ -0.32
TRPM1-211ENST00000560658 P0DMU3 169 aa13.04□□□□□ -0.32
TRPM1-211ENST00000560658 FAM231AP0DMU4 169 aa13.04□□□□□ -0.32
TRPM1-211ENST00000560658 FAM231CP0DMU5 169 aa13.04□□□□□ -0.32
TRPM1-211ENST00000560658 TCTEX1D4Q5JR98 221 aa13.04□□□□□ -0.32
TRPM1-211ENST00000560658 CFAP126Q5VTH2 177 aa13.04□□□□□ -0.32
TRPM1-211ENST00000560658 Q8N2B8 174 aa13.04□□□□□ -0.32
TRPM1-211ENST00000560658 C10orf126Q8N4M7 172 aa13.04□□□□□ -0.32
TRPM1-211ENST00000560658 WFDC12Q8WWY7 111 aa13.04□□□□□ -0.32
TRPM1-211ENST00000560658 SELENOKQ9Y6D0 94 aa13.04□□□□□ -0.32
TRPM1-211ENST00000560658 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.03□□□□□ -0.32
TRPM1-211ENST00000560658 TMEM238C9JI98 176 aa13.03□□□□□ -0.32
TRPM1-211ENST00000560658 ZNF415Q09FC8 603 aa13.03□□□□□ -0.32
TRPM1-211ENST00000560658 ETDBQ3ZM63 59 aa13.03□□□□□ -0.32
TRPM1-211ENST00000560658 DNAJC30Q96LL9 226 aa13.03□□□□□ -0.32
TRPM1-211ENST00000560658 PRO1854Q9UHT4 67 aa13.03□□□□□ -0.32
TRPM1-211ENST00000560658 NBASA2RRP1 2371 aa13.03□□□□□ -0.32
TRPM1-211ENST00000560658 IGLV4-3A0A075B6K6 122 aa13.02□□□□□ -0.32
TRPM1-211ENST00000560658 GAGE12HA6NDE8 117 aa13.02□□□□□ -0.32
TRPM1-211ENST00000560658 M0QXV9 152 aa13.02□□□□□ -0.32
TRPM1-211ENST00000560658 M0R2P5 195 aa13.02□□□□□ -0.32
TRPM1-211ENST00000560658 ZNF22P17026 224 aaPredicted RBP13.02□□□□□ -0.32
TRPM1-211ENST00000560658 DUX5Q96PT3 197 aa13.02□□□□□ -0.32
TRPM1-211ENST00000560658 C1QTNF4Q9BXJ3 329 aa13.02□□□□□ -0.32
TRPM1-211ENST00000560658 A0A0B4J2C4 111 aa13.02□□□□□ -0.33
TRPM1-211ENST00000560658 TSPEAR-AS2P59090 65 aa13.02□□□□□ -0.33
TRPM1-211ENST00000560658 SPXQ9BT56 116 aa13.02□□□□□ -0.33
TRPM1-211ENST00000560658 SPANXA1Q9NS26 97 aa13.02□□□□□ -0.33
TRPM1-211ENST00000560658 APOMO95445 188 aa13.01□□□□□ -0.33
TRPM1-211ENST00000560658 EMP1P54849 157 aa13.01□□□□□ -0.33
TRPM1-211ENST00000560658 C10orf99Q6UWK7 81 aa13.01□□□□□ -0.33
TRPM1-211ENST00000560658 CLUHP3Q96NS8 147 aa13.01□□□□□ -0.33
TRPM1-211ENST00000560658 TNFRSF18Q9Y5U5 241 aa13.01□□□□□ -0.33
TRPM1-211ENST00000560658 LOC107984156A0A0G2JMH3 177 aa13□□□□□ -0.33
TRPM1-211ENST00000560658 H3BMM0 161 aa13□□□□□ -0.33
TRPM1-211ENST00000560658 CFC1BP0CG36 223 aa13□□□□□ -0.33
TRPM1-211ENST00000560658 CFC1P0CG37 223 aa13□□□□□ -0.33
TRPM1-211ENST00000560658 ARL17AQ8IVW1 177 aa13□□□□□ -0.33
TRPM1-211ENST00000560658 PSMB2P49721 201 aa12.99□□□□□ -0.33
TRPM1-211ENST00000560658 MRPS36P82909 103 aaKnown RBP12.99□□□□□ -0.33
TRPM1-211ENST00000560658 SBSPONQ8IVN8 264 aa12.99□□□□□ -0.33
TRPM1-211ENST00000560658 TEX29Q8N6K0 151 aa12.99□□□□□ -0.33
TRPM1-211ENST00000560658 TSSC4Q9Y5U2 329 aaPredicted RBP12.99□□□□□ -0.33
TRPM1-211ENST00000560658 LRRC75A-AS1Q8N1F1 130 aa12.99□□□□□ -0.33
TRPM1-211ENST00000560658 BEX4Q9NWD9 120 aaPredicted RBP12.99□□□□□ -0.33
TRPM1-211ENST00000560658 CD28P10747 220 aa12.98□□□□□ -0.33
TRPM1-211ENST00000560658 DEFB131AP59861 70 aa12.98□□□□□ -0.33
TRPM1-211ENST00000560658 FOXI1Q12951 378 aa12.98□□□□□ -0.33
TRPM1-211ENST00000560658 SH2D6Q7Z4S9 175 aa12.98□□□□□ -0.33
TRPM1-211ENST00000560658 C4orf3Q8WVX3 66 aa12.98□□□□□ -0.33
TRPM1-211ENST00000560658 RAX2Q96IS3 184 aa12.98□□□□□ -0.33
TRPM1-211ENST00000560658 AGRNO00468 2067 aa12.97□□□□□ -0.33
TRPM1-211ENST00000560658 IGHV4-31P0DP07 118 aa12.97□□□□□ -0.33
TRPM1-211ENST00000560658 DUX3Q96PT4 197 aa12.97□□□□□ -0.33
TRPM1-211ENST00000560658 TMEM86BQ8N661 226 aa12.96□□□□□ -0.33
TRPM1-211ENST00000560658 PPDPFLQ8WWR9 84 aa12.96□□□□□ -0.33
TRPM1-211ENST00000560658 TINCRA0A1B0GVN0 87 aa12.95□□□□□ -0.34
TRPM1-211ENST00000560658 BEAN1Q3B7T3 259 aa12.95□□□□□ -0.34
TRPM1-211ENST00000560658 TEN1Q86WV5 123 aa12.95□□□□□ -0.34
TRPM1-211ENST00000560658 RNF183Q96D59 192 aa12.95□□□□□ -0.34
TRPM1-211ENST00000560658 TIMM21Q9BVV7 248 aa12.95□□□□□ -0.34
TRPM1-211ENST00000560658 PTPN13Q12923 2485 aa12.95□□□□□ -0.34
TRPM1-211ENST00000560658 A0A0J9YXV3 536 aa12.95□□□□□ -0.34
TRPM1-211ENST00000560658 KNCNA6PVL3 124 aa12.95□□□□□ -0.34
TRPM1-211ENST00000560658 AZU1P20160 251 aa12.95□□□□□ -0.34
TRPM1-211ENST00000560658 ERG28Q9UKR5 140 aa12.95□□□□□ -0.34
TRPM1-211ENST00000560658 TRAV25A0A0B4J276 109 aa12.94□□□□□ -0.34
TRPM1-211ENST00000560658 IGHV1-58A0A0C4DH39 117 aa12.94□□□□□ -0.34
TRPM1-211ENST00000560658 UBR5O95071 2799 aaPredicted RBP12.94□□□□□ -0.34
TRPM1-211ENST00000560658 INSP01308 110 aa12.94□□□□□ -0.34
TRPM1-211ENST00000560658 RBMY1A1P0DJD3 496 aaKnown RBP12.94□□□□□ -0.34
TRPM1-211ENST00000560658 RBMY1CP0DJD4 496 aa12.94□□□□□ -0.34
TRPM1-211ENST00000560658 SCGB1C2P0DMR2 95 aa12.94□□□□□ -0.34
TRPM1-211ENST00000560658 RBMY1FQ15415 496 aaKnown RBP12.94□□□□□ -0.34
TRPM1-211ENST00000560658 TMEM263Q8WUH6 116 aaKnown RBP12.94□□□□□ -0.34
TRPM1-211ENST00000560658 A4D1N5 150 aa12.93□□□□□ -0.34
TRPM1-211ENST00000560658 IGHV3-53P01767 116 aa12.93□□□□□ -0.34
TRPM1-211ENST00000560658 IGHV3-33P01772 117 aa12.93□□□□□ -0.34
TRPM1-211ENST00000560658 SMCPP49901 116 aaPredicted RBP12.93□□□□□ -0.34
TRPM1-211ENST00000560658 DYNLRB2Q8TF09 96 aa12.93□□□□□ -0.34
TRPM1-211ENST00000560658 OPRPNQ99935 248 aaPredicted RBP12.93□□□□□ -0.34
TRPM1-211ENST00000560658 SPANXDQ9BXN6 97 aa12.93□□□□□ -0.34
TRPM1-211ENST00000560658 SPANXCQ9NY87 97 aa12.93□□□□□ -0.34
TRPM1-211ENST00000560658 A0A0J9YXY3 114 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms