RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 LINC00694P0DN24 101 aa11.85□□□□□ -0.51
PBX1-219ENST00000560641 OPRPNQ99935 248 aaPredicted RBP11.85□□□□□ -0.51
PBX1-219ENST00000560641 IGHV3-16A0A0C4DH30 117 aa11.85□□□□□ -0.51
PBX1-219ENST00000560641 WIPF1O43516 503 aa11.85□□□□□ -0.51
PBX1-219ENST00000560641 DAND5Q8N907 189 aa11.85□□□□□ -0.51
PBX1-219ENST00000560641 SMCR5Q8TEV8 140 aa11.85□□□□□ -0.51
PBX1-219ENST00000560641 G3V318 75 aa11.84□□□□□ -0.51
PBX1-219ENST00000560641 J3KRW8 73 aa11.84□□□□□ -0.51
PBX1-219ENST00000560641 C9orf153Q5TBE3 101 aa11.84□□□□□ -0.51
PBX1-219ENST00000560641 FAM222AQ5U5X8 452 aa11.84□□□□□ -0.51
PBX1-219ENST00000560641 RNF152Q8N8N0 203 aa11.84□□□□□ -0.51
PBX1-219ENST00000560641 ZNF580Q9UK33 172 aa11.84□□□□□ -0.51
PBX1-219ENST00000560641 WDFY4Q6ZS81 3184 aa11.84□□□□□ -0.51
PBX1-219ENST00000560641 URB1O60287 2271 aaKnown RBP11.84□□□□□ -0.51
PBX1-219ENST00000560641 J3KT08 172 aa11.84□□□□□ -0.51
PBX1-219ENST00000560641 C5orf56Q8N8D9 126 aa11.84□□□□□ -0.51
PBX1-219ENST00000560641 NDUFA12Q9UI09 145 aa11.84□□□□□ -0.51
PBX1-219ENST00000560641 BEAN1Q3B7T3 259 aa11.84□□□□□ -0.51
PBX1-219ENST00000560641 A0A087WWL8 130 aa11.83□□□□□ -0.52
PBX1-219ENST00000560641 NPFFO15130 113 aa11.83□□□□□ -0.52
PBX1-219ENST00000560641 COX7CP15954 63 aa11.83□□□□□ -0.52
PBX1-219ENST00000560641 C2orf48Q96LS8 159 aa11.83□□□□□ -0.52
PBX1-219ENST00000560641 H3BUA1 57 aa11.82□□□□□ -0.52
PBX1-219ENST00000560641 COX7A2LO14548 114 aa11.82□□□□□ -0.52
PBX1-219ENST00000560641 TRACP01848 142 aa11.82□□□□□ -0.52
PBX1-219ENST00000560641 F5H697 171 aa11.82□□□□□ -0.52
PBX1-219ENST00000560641 FBXL19-AS1Q494R0 122 aa11.82□□□□□ -0.52
PBX1-219ENST00000560641 UNQ9165/PRO28630Q6UXU0 137 aa11.82□□□□□ -0.52
PBX1-219ENST00000560641 CITED2Q99967 270 aaPredicted RBP11.82□□□□□ -0.52
PBX1-219ENST00000560641 HERVK_113P63121 156 aa11.81□□□□□ -0.52
PBX1-219ENST00000560641 CEMP1Q6PRD7 247 aaPredicted RBP11.81□□□□□ -0.52
PBX1-219ENST00000560641 IGLV5-45A0A087WSX0 123 aa11.81□□□□□ -0.52
PBX1-219ENST00000560641 TMEM219Q86XT9 240 aa11.81□□□□□ -0.52
PBX1-219ENST00000560641 IGHV3-64A0A075B6Q5 118 aa11.81□□□□□ -0.52
PBX1-219ENST00000560641 NDUFA1O15239 70 aa11.81□□□□□ -0.52
PBX1-219ENST00000560641 C11orf71Q6IPW1 123 aa11.81□□□□□ -0.52
PBX1-219ENST00000560641 ID1P41134 155 aa11.8□□□□□ -0.52
PBX1-219ENST00000560641 SPXQ9BT56 116 aa11.8□□□□□ -0.52
PBX1-219ENST00000560641 TRAV41A0A0B4J266 112 aa11.79□□□□□ -0.52
PBX1-219ENST00000560641 RPL11P62913 178 aaKnown RBP11.79□□□□□ -0.52
PBX1-219ENST00000560641 PRORYQ9H606 182 aa11.79□□□□□ -0.52
PBX1-219ENST00000560641 F6UB75 175 aa11.79□□□□□ -0.52
PBX1-219ENST00000560641 PRSS2P07478 247 aa11.79□□□□□ -0.52
PBX1-219ENST00000560641 USMG5Q96IX5 58 aa11.79□□□□□ -0.52
PBX1-219ENST00000560641 LINC00527Q9UJ94 153 aa11.78□□□□□ -0.52
PBX1-219ENST00000560641 C22orf24Q9Y442 160 aa11.78□□□□□ -0.52
PBX1-219ENST00000560641 DEFB1P60022 68 aa11.78□□□□□ -0.52
PBX1-219ENST00000560641 COPS9Q8WXC6 57 aa11.78□□□□□ -0.52
PBX1-219ENST00000560641 SMIM9A6NGZ8 99 aa11.77□□□□□ -0.52
PBX1-219ENST00000560641 TRAV8-3A0A0A6YYJ7 113 aa11.77□□□□□ -0.53
PBX1-219ENST00000560641 CD28P10747 220 aa11.77□□□□□ -0.53
PBX1-219ENST00000560641 ATOX1O00244 68 aa11.77□□□□□ -0.53
PBX1-219ENST00000560641 ZFP36P26651 326 aaKnown RBP11.77□□□□□ -0.53
PBX1-219ENST00000560641 Q6ZSV7 163 aa11.77□□□□□ -0.53
PBX1-219ENST00000560641 ZNF318Q5VUA4 2279 aa11.76□□□□□ -0.53
PBX1-219ENST00000560641 TIRAPP58753 221 aa11.76□□□□□ -0.53
PBX1-219ENST00000560641 ZNF415Q09FC8 603 aa11.76□□□□□ -0.53
PBX1-219ENST00000560641 PRRC2AP48634 2157 aaKnown RBP11.76□□□□□ -0.53
PBX1-219ENST00000560641 K7EMT4 169 aa11.76□□□□□ -0.53
PBX1-219ENST00000560641 ADARB2-AS1A8MUL3 147 aa11.75□□□□□ -0.53
PBX1-219ENST00000560641 INAFM2P0DMQ5 153 aa11.75□□□□□ -0.53
PBX1-219ENST00000560641 FAM19A3Q7Z5A8 133 aa11.75□□□□□ -0.53
PBX1-219ENST00000560641 Q8NA96 180 aa11.75□□□□□ -0.53
PBX1-219ENST00000560641 MOB4Q9Y3A3 225 aa11.75□□□□□ -0.53
PBX1-219ENST00000560641 PIK3CD-AS1Q5SR53 167 aa11.75□□□□□ -0.53
PBX1-219ENST00000560641 BSNQ9UPA5 3926 aa11.75□□□□□ -0.53
PBX1-219ENST00000560641 SAA4P35542 130 aa11.74□□□□□ -0.53
PBX1-219ENST00000560641 FAM74A4Q5TZK3 123 aa11.74□□□□□ -0.53
PBX1-219ENST00000560641 FAM19A5Q7Z5A7 132 aaPredicted RBP11.73□□□□□ -0.53
PBX1-219ENST00000560641 DEFB104AQ8WTQ1 72 aa11.73□□□□□ -0.53
PBX1-219ENST00000560641 UBE2D4Q9Y2X8 147 aa11.73□□□□□ -0.53
PBX1-219ENST00000560641 TRBV12-3P01733 135 aa11.73□□□□□ -0.53
PBX1-219ENST00000560641 DAZ2Q13117 558 aaKnown RBP11.73□□□□□ -0.53
PBX1-219ENST00000560641 DAZ4Q86SG3 579 aaKnown RBP11.73□□□□□ -0.53
PBX1-219ENST00000560641 LINC00308Q8TCZ7 52 aa11.73□□□□□ -0.53
PBX1-219ENST00000560641 RHPN1-AS1Q9BWJ2 59 aa11.73□□□□□ -0.53
PBX1-219ENST00000560641 DAZ1Q9NQZ3 744 aaKnown RBP11.73□□□□□ -0.53
PBX1-219ENST00000560641 DAZ3Q9NR90 486 aaKnown RBP11.73□□□□□ -0.53
PBX1-219ENST00000560641 IGLV5-39A0A0G2JS06 123 aa11.73□□□□□ -0.53
PBX1-219ENST00000560641 C3orf56Q8N813 242 aa11.73□□□□□ -0.53
PBX1-219ENST00000560641 PIEZO2Q9H5I5 2752 aa11.72□□□□□ -0.53
PBX1-219ENST00000560641 PKDREJQ9NTG1 2253 aa11.72□□□□□ -0.53
PBX1-219ENST00000560641 IGHV1OR15-1A0A075B7D0 117 aa11.72□□□□□ -0.53
PBX1-219ENST00000560641 TRAV12-3A0A0B4J271 114 aa11.72□□□□□ -0.53
PBX1-219ENST00000560641 PF4V1P10720 104 aa11.72□□□□□ -0.53
PBX1-219ENST00000560641 DEFB124Q8NES8 71 aa11.72□□□□□ -0.53
PBX1-219ENST00000560641 CHCHD7Q9BUK0 85 aa11.72□□□□□ -0.53
PBX1-219ENST00000560641 CIRBPQ14011 172 aaKnown RBP11.71□□□□□ -0.53
PBX1-219ENST00000560641 IGHV3OR16-10A0A075B7F0 116 aa11.71□□□□□ -0.53
PBX1-219ENST00000560641 TMEM258P61165 79 aa11.71□□□□□ -0.53
PBX1-219ENST00000560641 LOC107984640A0A0U1RRK4 108 aa11.7□□□□□ -0.54
PBX1-219ENST00000560641 GAGE2AQ6NT46 116 aa11.7□□□□□ -0.54
PBX1-219ENST00000560641 OR13C6PQ8NH95 151 aa11.7□□□□□ -0.54
PBX1-219ENST00000560641 LY6HO94772 140 aa11.7□□□□□ -0.54
PBX1-219ENST00000560641 IGHG2P01859 326 aa11.69□□□□□ -0.54
PBX1-219ENST00000560641 OBSCN-AS1Q96MR7 158 aa11.69□□□□□ -0.54
PBX1-219ENST00000560641 LINC01560Q8TB33 94 aa11.69□□□□□ -0.54
PBX1-219ENST00000560641 DUX5Q96PT3 197 aa11.69□□□□□ -0.54
PBX1-219ENST00000560641 ZDBF2Q9HCK1 2354 aa11.69□□□□□ -0.54
PBX1-219ENST00000560641 PF4P02776 101 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms