RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 SMAD5-AS1Q9Y6J3 95 aa6.5□□□□□ -1.37
CCDC33-209ENST00000560565 TRAV26-1A0A087WT03 109 aa6.49□□□□□ -1.37
CCDC33-209ENST00000560565 FAM240AA0A1B0GVK7 77 aa6.49□□□□□ -1.37
CCDC33-209ENST00000560565 SDHAF1A6NFY7 115 aa6.49□□□□□ -1.37
CCDC33-209ENST00000560565 PRSS29PA6NIE9 313 aa6.49□□□□□ -1.37
CCDC33-209ENST00000560565 F8W735 103 aaPredicted RBP6.49□□□□□ -1.37
CCDC33-209ENST00000560565 H3BUA1 57 aa6.49□□□□□ -1.37
CCDC33-209ENST00000560565 NXPH4O95158 308 aa6.49□□□□□ -1.37
CCDC33-209ENST00000560565 BRI3O95415 125 aa6.49□□□□□ -1.37
CCDC33-209ENST00000560565 SAA4P35542 130 aa6.49□□□□□ -1.37
CCDC33-209ENST00000560565 DLX1P56177 255 aa6.49□□□□□ -1.37
CCDC33-209ENST00000560565 C15orf32Q32M92 178 aa6.49□□□□□ -1.37
CCDC33-209ENST00000560565 TTC32Q5I0X7 151 aa6.49□□□□□ -1.37
CCDC33-209ENST00000560565 AMTNQ6UX39 209 aa6.49□□□□□ -1.37
CCDC33-209ENST00000560565 RNF183Q96D59 192 aa6.49□□□□□ -1.37
CCDC33-209ENST00000560565 CDIP1Q9H305 208 aa6.49□□□□□ -1.37
CCDC33-209ENST00000560565 ZFAND3Q9H8U3 227 aa6.49□□□□□ -1.37
CCDC33-209ENST00000560565 EPPK1P58107 5090 aaKnown RBP6.48□□□□□ -1.37
CCDC33-209ENST00000560565 A0A0J9YY99 117 aa6.48□□□□□ -1.37
CCDC33-209ENST00000560565 H3BT86 120 aa6.48□□□□□ -1.37
CCDC33-209ENST00000560565 M0R2P5 195 aa6.48□□□□□ -1.37
CCDC33-209ENST00000560565 SLC25A20O43772 301 aa6.48□□□□□ -1.37
CCDC33-209ENST00000560565 IGHG4P01861 327 aa6.48□□□□□ -1.37
CCDC33-209ENST00000560565 ACYP1P07311 99 aa6.48□□□□□ -1.37
CCDC33-209ENST00000560565 CD7P09564 240 aa6.48□□□□□ -1.37
CCDC33-209ENST00000560565 RPL13AP40429 203 aaKnown RBP6.48□□□□□ -1.37
CCDC33-209ENST00000560565 ID1P41134 155 aa6.48□□□□□ -1.37
CCDC33-209ENST00000560565 ATP5G2Q06055 141 aa6.48□□□□□ -1.37
CCDC33-209ENST00000560565 AJUBAQ96IF1 538 aa6.48□□□□□ -1.37
CCDC33-209ENST00000560565 RAX2Q96IS3 184 aa6.48□□□□□ -1.37
CCDC33-209ENST00000560565 U3KQE9 123 aa6.48□□□□□ -1.37
CCDC33-209ENST00000560565 TRBV6-5A0A0K0K1A5 114 aa6.47□□□□□ -1.37
CCDC33-209ENST00000560565 GAGE12JA6NER3 117 aa6.47□□□□□ -1.37
CCDC33-209ENST00000560565 H3BVH4 76 aa6.47□□□□□ -1.37
CCDC33-209ENST00000560565 RHODO00212 210 aa6.47□□□□□ -1.37
CCDC33-209ENST00000560565 LEPROTO15243 131 aa6.47□□□□□ -1.37
CCDC33-209ENST00000560565 GAGE7O76087 117 aa6.47□□□□□ -1.37
CCDC33-209ENST00000560565 TRGV3P03979 118 aa6.47□□□□□ -1.37
CCDC33-209ENST00000560565 GAGE12FP0CL80 117 aa6.47□□□□□ -1.37
CCDC33-209ENST00000560565 GAGE12GP0CL81 117 aa6.47□□□□□ -1.37
CCDC33-209ENST00000560565 GAGE12IP0CL82 117 aa6.47□□□□□ -1.37
CCDC33-209ENST00000560565 IFITM1P13164 125 aa6.47□□□□□ -1.37
CCDC33-209ENST00000560565 PRB3Q04118 309 aaPredicted RBP6.47□□□□□ -1.37
CCDC33-209ENST00000560565 GAGE4Q13068 117 aa6.47□□□□□ -1.37
CCDC33-209ENST00000560565 NFE4Q86UQ8 179 aa6.47□□□□□ -1.37
CCDC33-209ENST00000560565 APRG1Q8IVJ8 170 aa6.47□□□□□ -1.37
CCDC33-209ENST00000560565 USMG5Q96IX5 58 aa6.47□□□□□ -1.37
CCDC33-209ENST00000560565 ODF3Q96PU9 254 aa6.47□□□□□ -1.37
CCDC33-209ENST00000560565 TTTY13Q9BZ97 58 aa6.47□□□□□ -1.37
CCDC33-209ENST00000560565 IGHV7-81A0A0B4J1V7 117 aa6.46□□□□□ -1.38
CCDC33-209ENST00000560565 TRAV8-2A0A0B4J237 113 aa6.46□□□□□ -1.38
CCDC33-209ENST00000560565 TRAV8-4A0A0B4J246 113 aa6.46□□□□□ -1.38
CCDC33-209ENST00000560565 J3QQQ9 107 aa6.46□□□□□ -1.38
CCDC33-209ENST00000560565 NDUFA4O00483 81 aa6.46□□□□□ -1.38
CCDC33-209ENST00000560565 IGHV3-30P01768 117 aa6.46□□□□□ -1.38
CCDC33-209ENST00000560565 ATP5G1P05496 136 aa6.46□□□□□ -1.38
CCDC33-209ENST00000560565 CFC1BP0CG36 223 aa6.46□□□□□ -1.38
CCDC33-209ENST00000560565 CFC1P0CG37 223 aa6.46□□□□□ -1.38
CCDC33-209ENST00000560565 IGHV3-30-5P0DP03 117 aa6.46□□□□□ -1.38
CCDC33-209ENST00000560565 KRTAP24-1Q3LI83 254 aa6.46□□□□□ -1.38
CCDC33-209ENST00000560565 ANKRD29Q8N6D5 301 aa6.46□□□□□ -1.38
CCDC33-209ENST00000560565 RASL10AQ92737 203 aa6.46□□□□□ -1.38
CCDC33-209ENST00000560565 TRBV30A0A0K0K1B3 111 aa6.45□□□□□ -1.38
CCDC33-209ENST00000560565 TRBV10-2A0A0K0K1G8 114 aa6.45□□□□□ -1.38
CCDC33-209ENST00000560565 FSHBP01225 129 aa6.45□□□□□ -1.38
CCDC33-209ENST00000560565 MGPP08493 103 aa6.45□□□□□ -1.38
CCDC33-209ENST00000560565 GATA1P15976 413 aaPredicted RBP6.45□□□□□ -1.38
CCDC33-209ENST00000560565 CRIP2P52943 208 aaPredicted RBP6.45□□□□□ -1.38
CCDC33-209ENST00000560565 NSUN5P1Q3KNT7 163 aa6.45□□□□□ -1.38
CCDC33-209ENST00000560565 ZNF876PQ49A33 203 aa6.45□□□□□ -1.38
CCDC33-209ENST00000560565 FAM159AQ6UWV7 190 aa6.45□□□□□ -1.38
CCDC33-209ENST00000560565 TRPT1Q86TN4 253 aaKnown RBP6.45□□□□□ -1.38
CCDC33-209ENST00000560565 ZNF575Q86XF7 245 aa6.45□□□□□ -1.38
CCDC33-209ENST00000560565 IMUPQ9GZP8 106 aa6.45□□□□□ -1.38
CCDC33-209ENST00000560565 TMEM126AQ9H061 195 aa6.45□□□□□ -1.38
CCDC33-209ENST00000560565 MDFICQ9P1T7 246 aa6.45□□□□□ -1.38
CCDC33-209ENST00000560565 TP53TG1Q9Y2A0 90 aa6.45□□□□□ -1.38
CCDC33-209ENST00000560565 TRBV27A0A0K0K1C4 114 aa6.44□□□□□ -1.38
CCDC33-209ENST00000560565 IGIPA6NJ69 53 aa6.44□□□□□ -1.38
CCDC33-209ENST00000560565 TCL1BO95988 128 aa6.44□□□□□ -1.38
CCDC33-209ENST00000560565 MT-ATP8P03928 68 aa6.44□□□□□ -1.38
CCDC33-209ENST00000560565 IGHV4-38-2P0DP08 117 aa6.44□□□□□ -1.38
CCDC33-209ENST00000560565 PPIFP30405 207 aaKnown RBP6.44□□□□□ -1.38
CCDC33-209ENST00000560565 XGP55808 180 aa6.44□□□□□ -1.38
CCDC33-209ENST00000560565 HILS1P60008 231 aa6.44□□□□□ -1.38
CCDC33-209ENST00000560565 Q1RN00 199 aa6.44□□□□□ -1.38
CCDC33-209ENST00000560565 TMEM170BQ5T4T1 132 aa6.44□□□□□ -1.38
CCDC33-209ENST00000560565 ZFP2Q6ZN57 461 aa6.44□□□□□ -1.38
CCDC33-209ENST00000560565 Q8N9W7 124 aa6.44□□□□□ -1.38
CCDC33-209ENST00000560565 CITED1Q99966 193 aa6.44□□□□□ -1.38
CCDC33-209ENST00000560565 MOB4Q9Y3A3 225 aa6.44□□□□□ -1.38
CCDC33-209ENST00000560565 IGHV3OR16-10A0A075B7F0 116 aa6.43□□□□□ -1.38
CCDC33-209ENST00000560565 TRAV26-2A0A0B4J265 109 aa6.43□□□□□ -1.38
CCDC33-209ENST00000560565 PRAC2D3DTV9 90 aa6.43□□□□□ -1.38
CCDC33-209ENST00000560565 H3BMM0 161 aa6.43□□□□□ -1.38
CCDC33-209ENST00000560565 LGALS9O00182 355 aa6.43□□□□□ -1.38
CCDC33-209ENST00000560565 SMCPP49901 116 aaPredicted RBP6.43□□□□□ -1.38
CCDC33-209ENST00000560565 NDUFV3P56181 108 aaKnown RBP6.43□□□□□ -1.38
CCDC33-209ENST00000560565 ECSCRQ19T08 205 aa6.43□□□□□ -1.38
CCDC33-209ENST00000560565 C14orf178Q8N769 122 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms