RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 PYY3Q5JQD4 70 aa9.79□□□□□ -0.84
PKNOX1-209ENST00000560448 DMRTA1Q5VZB9 504 aa9.79□□□□□ -0.84
PKNOX1-209ENST00000560448 FAM104BQ5XKR9 115 aa9.79□□□□□ -0.84
PKNOX1-209ENST00000560448 ZFP2Q6ZN57 461 aa9.79□□□□□ -0.84
PKNOX1-209ENST00000560448 MSRB1Q9NZV6 116 aa9.79□□□□□ -0.84
PKNOX1-209ENST00000560448 HHLA3Q9XRX5 114 aa9.79□□□□□ -0.84
PKNOX1-209ENST00000560448 PLECQ15149 4684 aaKnown RBP9.78□□□□□ -0.84
PKNOX1-209ENST00000560448 RHODO00212 210 aa9.78□□□□□ -0.84
PKNOX1-209ENST00000560448 RS1O15537 224 aa9.78□□□□□ -0.84
PKNOX1-209ENST00000560448 FHL2Q14192 279 aa9.78□□□□□ -0.84
PKNOX1-209ENST00000560448 TWIST1Q15672 202 aa9.78□□□□□ -0.84
PKNOX1-209ENST00000560448 TMEM191AQ9H0A3 160 aa9.78□□□□□ -0.84
PKNOX1-209ENST00000560448 PAX4O43316 350 aa9.77□□□□□ -0.85
PKNOX1-209ENST00000560448 CRYBA4P53673 196 aa9.77□□□□□ -0.85
PKNOX1-209ENST00000560448 CCL18P55774 89 aa9.77□□□□□ -0.85
PKNOX1-209ENST00000560448 CFAP126Q5VTH2 177 aa9.77□□□□□ -0.85
PKNOX1-209ENST00000560448 SH2D6Q7Z4S9 175 aa9.77□□□□□ -0.85
PKNOX1-209ENST00000560448 POM121L12Q8N7R1 296 aa9.77□□□□□ -0.85
PKNOX1-209ENST00000560448 URB1-AS1Q96HZ7 61 aa9.77□□□□□ -0.85
PKNOX1-209ENST00000560448 ZNF479Q96JC4 524 aa9.77□□□□□ -0.85
PKNOX1-209ENST00000560448 TRBV6-4A0A1B0GX49 114 aa9.76□□□□□ -0.85
PKNOX1-209ENST00000560448 NUDT3O95989 172 aa9.76□□□□□ -0.85
PKNOX1-209ENST00000560448 CACNG7P62955 275 aa9.76□□□□□ -0.85
PKNOX1-209ENST00000560448 MRPL51Q4U2R6 128 aaKnown RBP9.76□□□□□ -0.85
PKNOX1-209ENST00000560448 AMN1Q8IY45 258 aa9.76□□□□□ -0.85
PKNOX1-209ENST00000560448 RNF185Q96GF1 192 aa9.76□□□□□ -0.85
PKNOX1-209ENST00000560448 ICOSQ9Y6W8 199 aa9.76□□□□□ -0.85
PKNOX1-209ENST00000560448 LYSTQ99698 3801 aa9.76□□□□□ -0.85
PKNOX1-209ENST00000560448 NXPH4O95158 308 aa9.75□□□□□ -0.85
PKNOX1-209ENST00000560448 IGHV3-53P01767 116 aa9.75□□□□□ -0.85
PKNOX1-209ENST00000560448 SSTP61278 116 aa9.75□□□□□ -0.85
PKNOX1-209ENST00000560448 JOSD1Q15040 202 aaPredicted RBP9.75□□□□□ -0.85
PKNOX1-209ENST00000560448 MRPL23Q16540 153 aaKnown RBP9.75□□□□□ -0.85
PKNOX1-209ENST00000560448 UBE2DNLQ8IWF7 75 aa9.75□□□□□ -0.85
PKNOX1-209ENST00000560448 OR10AG1Q8NH19 301 aa9.75□□□□□ -0.85
PKNOX1-209ENST00000560448 VSIG2Q96IQ7 327 aa9.75□□□□□ -0.85
PKNOX1-209ENST00000560448 ALMS1Q8TCU4 4167 aa9.75□□□□□ -0.85
PKNOX1-209ENST00000560448 A0A0J9YY99 117 aa9.74□□□□□ -0.85
PKNOX1-209ENST00000560448 GATA1P15976 413 aaPredicted RBP9.74□□□□□ -0.85
PKNOX1-209ENST00000560448 RHOHQ15669 191 aa9.74□□□□□ -0.85
PKNOX1-209ENST00000560448 NIT1Q86X76 327 aa9.74□□□□□ -0.85
PKNOX1-209ENST00000560448 PRADC1Q9BSG0 188 aa9.74□□□□□ -0.85
PKNOX1-209ENST00000560448 RAB4AP20338 218 aa9.73□□□□□ -0.85
PKNOX1-209ENST00000560448 SPANXN1Q5VSR9 72 aa9.73□□□□□ -0.85
PKNOX1-209ENST00000560448 A0A096LPF7 62 aa9.73□□□□□ -0.85
PKNOX1-209ENST00000560448 D6R8Y8 96 aa9.73□□□□□ -0.85
PKNOX1-209ENST00000560448 M0R381 172 aa9.73□□□□□ -0.85
PKNOX1-209ENST00000560448 CDPF1Q6NVV7 123 aa9.73□□□□□ -0.85
PKNOX1-209ENST00000560448 CHCHD1Q96BP2 118 aaKnown RBP9.73□□□□□ -0.85
PKNOX1-209ENST00000560448 NIT2Q9NQR4 276 aa9.73□□□□□ -0.85
PKNOX1-209ENST00000560448 SACSQ9NZJ4 4579 aa9.72□□□□□ -0.85
PKNOX1-209ENST00000560448 UFSP1Q6NVU6 142 aa9.72□□□□□ -0.85
PKNOX1-209ENST00000560448 NEGR1Q7Z3B1 354 aa9.72□□□□□ -0.85
PKNOX1-209ENST00000560448 ORMDL3Q8N138 153 aa9.72□□□□□ -0.85
PKNOX1-209ENST00000560448 PRELID3AQ96N28 172 aa9.72□□□□□ -0.85
PKNOX1-209ENST00000560448 UPK3BQ9BT76 320 aa9.72□□□□□ -0.85
PKNOX1-209ENST00000560448 SAMD10Q9BYL1 202 aa9.72□□□□□ -0.85
PKNOX1-209ENST00000560448 DNAH1Q9P2D7 4330 aa9.71□□□□□ -0.85
PKNOX1-209ENST00000560448 NACAE9PAV3 2078 aa9.71□□□□□ -0.86
PKNOX1-209ENST00000560448 K7EQD1 137 aa9.71□□□□□ -0.86
PKNOX1-209ENST00000560448 AMTP48728 403 aa9.71□□□□□ -0.86
PKNOX1-209ENST00000560448 RNASEKQ6P5S7 137 aaKnown RBP9.71□□□□□ -0.86
PKNOX1-209ENST00000560448 FAM19A2Q8N3H0 131 aa9.71□□□□□ -0.86
PKNOX1-209ENST00000560448 AP1S3Q96PC3 154 aa9.71□□□□□ -0.86
PKNOX1-209ENST00000560448 PPBPP02775 128 aa9.7□□□□□ -0.86
PKNOX1-209ENST00000560448 LINC00614P0C842 121 aa9.7□□□□□ -0.86
PKNOX1-209ENST00000560448 GYPEP15421 78 aa9.7□□□□□ -0.86
PKNOX1-209ENST00000560448 PMCHP20382 165 aa9.7□□□□□ -0.86
PKNOX1-209ENST00000560448 EVI2AP22794 236 aa9.7□□□□□ -0.86
PKNOX1-209ENST00000560448 SLC25A29Q8N8R3 303 aa9.7□□□□□ -0.86
PKNOX1-209ENST00000560448 TRBV10-1A0A0K0K1A3 114 aa9.69□□□□□ -0.86
PKNOX1-209ENST00000560448 SMKR1H3BMG3 65 aa9.69□□□□□ -0.86
PKNOX1-209ENST00000560448 HSBP1O75506 76 aa9.69□□□□□ -0.86
PKNOX1-209ENST00000560448 GAS8-AS1O95177 125 aa9.69□□□□□ -0.86
PKNOX1-209ENST00000560448 NPYP01303 97 aa9.69□□□□□ -0.86
PKNOX1-209ENST00000560448 CRYGDP07320 174 aa9.69□□□□□ -0.86
PKNOX1-209ENST00000560448 SMIM17P0DL12 118 aa9.69□□□□□ -0.86
PKNOX1-209ENST00000560448 CKS2P33552 79 aa9.69□□□□□ -0.86
PKNOX1-209ENST00000560448 TIRAPP58753 221 aa9.69□□□□□ -0.86
PKNOX1-209ENST00000560448 MRPS16Q9Y3D3 137 aaKnown RBP9.69□□□□□ -0.86
PKNOX1-209ENST00000560448 FAM74A4Q5TZK3 123 aa9.68□□□□□ -0.86
PKNOX1-209ENST00000560448 SMIM15Q7Z3B0 74 aa9.68□□□□□ -0.86
PKNOX1-209ENST00000560448 LAMTOR2Q9Y2Q5 125 aa9.68□□□□□ -0.86
PKNOX1-209ENST00000560448 LINC00588Q9Y4M8 146 aa9.68□□□□□ -0.86
PKNOX1-209ENST00000560448 RYR2Q92736 4967 aa9.68□□□□□ -0.86
PKNOX1-209ENST00000560448 NCR2O95944 276 aa9.67□□□□□ -0.86
PKNOX1-209ENST00000560448 IFI27P40305 119 aaPredicted RBP9.67□□□□□ -0.86
PKNOX1-209ENST00000560448 ESRGQ1W209 222 aa9.67□□□□□ -0.86
PKNOX1-209ENST00000560448 KIF25-AS1Q9Y6Z4 181 aa9.67□□□□□ -0.86
PKNOX1-209ENST00000560448 IGHV3-73A0A0B4J1V6 119 aa9.66□□□□□ -0.86
PKNOX1-209ENST00000560448 IGHV1-24A0A0C4DH33 117 aa9.66□□□□□ -0.86
PKNOX1-209ENST00000560448 LINC01546A6NGU7 62 aa9.66□□□□□ -0.86
PKNOX1-209ENST00000560448 K7EP13 123 aa9.66□□□□□ -0.86
PKNOX1-209ENST00000560448 Q8N976 141 aa9.66□□□□□ -0.86
PKNOX1-209ENST00000560448 ZNRF2Q8NHG8 242 aa9.66□□□□□ -0.86
PKNOX1-209ENST00000560448 JPT2Q9H910 190 aa9.66□□□□□ -0.86
PKNOX1-209ENST00000560448 A0A087WWL8 130 aa9.65□□□□□ -0.86
PKNOX1-209ENST00000560448 PRSS47A8MTI9 375 aa9.65□□□□□ -0.86
PKNOX1-209ENST00000560448 TNFRSF6BO95407 300 aa9.65□□□□□ -0.86
PKNOX1-209ENST00000560448 BTF3P20290 206 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms