RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 NBDYA0A0U1RRE5 68 aa9.5□□□□□ -0.89
SMAD3-214ENST00000560402 H3BVH4 76 aa9.5□□□□□ -0.89
SMAD3-214ENST00000560402 NUDT3O95989 172 aa9.5□□□□□ -0.89
SMAD3-214ENST00000560402 AZU1P20160 251 aa9.5□□□□□ -0.89
SMAD3-214ENST00000560402 CKS2P33552 79 aa9.5□□□□□ -0.89
SMAD3-214ENST00000560402 CCL18P55774 89 aa9.5□□□□□ -0.89
SMAD3-214ENST00000560402 JOSD1Q15040 202 aaPredicted RBP9.5□□□□□ -0.89
SMAD3-214ENST00000560402 PRR9Q5T870 116 aa9.5□□□□□ -0.89
SMAD3-214ENST00000560402 FA2HQ7L5A8 372 aa9.5□□□□□ -0.89
SMAD3-214ENST00000560402 C6orf223Q8N319 242 aa9.5□□□□□ -0.89
SMAD3-214ENST00000560402 RNASE8Q8TDE3 154 aaKnown RBP9.5□□□□□ -0.89
SMAD3-214ENST00000560402 SSTP61278 116 aa9.49□□□□□ -0.89
SMAD3-214ENST00000560402 ANXA2RQ3ZCQ2 193 aa9.49□□□□□ -0.89
SMAD3-214ENST00000560402 ZNF575Q86XF7 245 aa9.49□□□□□ -0.89
SMAD3-214ENST00000560402 PRSS3P2Q8NHM4 247 aa9.49□□□□□ -0.89
SMAD3-214ENST00000560402 PRELID3AQ96N28 172 aa9.49□□□□□ -0.89
SMAD3-214ENST00000560402 C11orf21Q9P2W6 132 aa9.49□□□□□ -0.89
SMAD3-214ENST00000560402 TP53TG3Q9ULZ0 132 aa9.49□□□□□ -0.89
SMAD3-214ENST00000560402 TRGV11A0A075B6L2 103 aa9.48□□□□□ -0.89
SMAD3-214ENST00000560402 PRM2P04554 102 aa9.48□□□□□ -0.89
SMAD3-214ENST00000560402 PYY3Q5JQD4 70 aa9.48□□□□□ -0.89
SMAD3-214ENST00000560402 MUC21Q5SSG8 566 aa9.48□□□□□ -0.89
SMAD3-214ENST00000560402 AMN1Q8IY45 258 aa9.48□□□□□ -0.89
SMAD3-214ENST00000560402 SYT8Q8NBV8 401 aa9.48□□□□□ -0.89
SMAD3-214ENST00000560402 AP1S3Q96PC3 154 aa9.48□□□□□ -0.89
SMAD3-214ENST00000560402 TRAV12-3A0A0B4J271 114 aa9.47□□□□□ -0.89
SMAD3-214ENST00000560402 MUC21A0A0G2JKD1 596 aa9.47□□□□□ -0.89
SMAD3-214ENST00000560402 MUC21A0A140T8X8 626 aa9.47□□□□□ -0.89
SMAD3-214ENST00000560402 D6R8Y8 96 aa9.47□□□□□ -0.89
SMAD3-214ENST00000560402 SCGB1D1O95968 90 aa9.47□□□□□ -0.89
SMAD3-214ENST00000560402 LINC00614P0C842 121 aa9.47□□□□□ -0.89
SMAD3-214ENST00000560402 MRPL51Q4U2R6 128 aaKnown RBP9.47□□□□□ -0.89
SMAD3-214ENST00000560402 TTC32Q5I0X7 151 aa9.47□□□□□ -0.89
SMAD3-214ENST00000560402 NIT1Q86X76 327 aa9.47□□□□□ -0.89
SMAD3-214ENST00000560402 MAP1LC3AQ9H492 121 aa9.47□□□□□ -0.89
SMAD3-214ENST00000560402 NOP10Q9NPE3 64 aaKnown RBP9.47□□□□□ -0.89
SMAD3-214ENST00000560402 NUPR1O60356 82 aa9.46□□□□□ -0.9
SMAD3-214ENST00000560402 PPP1R17O96001 155 aa9.46□□□□□ -0.9
SMAD3-214ENST00000560402 SMIM17P0DL12 118 aa9.46□□□□□ -0.9
SMAD3-214ENST00000560402 HTN1P15515 57 aa9.46□□□□□ -0.9
SMAD3-214ENST00000560402 LINC00310P59036 64 aa9.46□□□□□ -0.9
SMAD3-214ENST00000560402 TNP2Q05952 138 aa9.46□□□□□ -0.9
SMAD3-214ENST00000560402 TDRG1Q3Y452 100 aa9.46□□□□□ -0.9
SMAD3-214ENST00000560402 LINC00612Q8N6U2 182 aa9.46□□□□□ -0.9
SMAD3-214ENST00000560402 OR10AG1Q8NH19 301 aa9.46□□□□□ -0.9
SMAD3-214ENST00000560402 MRAP2Q96G30 205 aa9.46□□□□□ -0.9
SMAD3-214ENST00000560402 AP5S1Q9NUS5 200 aa9.46□□□□□ -0.9
SMAD3-214ENST00000560402 LINC00588Q9Y4M8 146 aa9.46□□□□□ -0.9
SMAD3-214ENST00000560402 IGHV1OR15-1A0A075B7D0 117 aa9.45□□□□□ -0.9
SMAD3-214ENST00000560402 C16orf90A8MZG2 172 aa9.45□□□□□ -0.9
SMAD3-214ENST00000560402 H3BNG1 76 aa9.45□□□□□ -0.9
SMAD3-214ENST00000560402 M0R381 172 aa9.45□□□□□ -0.9
SMAD3-214ENST00000560402 CDK2AP2O75956 126 aa9.45□□□□□ -0.9
SMAD3-214ENST00000560402 DPH3P1Q9H4G8 78 aa9.45□□□□□ -0.9
SMAD3-214ENST00000560402 HSPB8Q9UJY1 196 aa9.45□□□□□ -0.9
SMAD3-214ENST00000560402 HSPG2P98160 4391 aa9.44□□□□□ -0.9
SMAD3-214ENST00000560402 LRP1BQ9NZR2 4599 aa9.44□□□□□ -0.9
SMAD3-214ENST00000560402 C20orf202A1L168 122 aa9.44□□□□□ -0.9
SMAD3-214ENST00000560402 BTF3P20290 206 aaKnown RBP9.44□□□□□ -0.9
SMAD3-214ENST00000560402 KRTDAPP60985 99 aa9.44□□□□□ -0.9
SMAD3-214ENST00000560402 UPK3BQ9BT76 320 aa9.44□□□□□ -0.9
SMAD3-214ENST00000560402 NXT2Q9NPJ8 142 aaKnown RBP9.44□□□□□ -0.9
SMAD3-214ENST00000560402 SCRT2Q9NQ03 307 aa9.44□□□□□ -0.9
SMAD3-214ENST00000560402 PCP4L1A6NKN8 68 aa9.43□□□□□ -0.9
SMAD3-214ENST00000560402 TSTD3H0UI37 97 aa9.43□□□□□ -0.9
SMAD3-214ENST00000560402 MSRB1Q9NZV6 116 aa9.43□□□□□ -0.9
SMAD3-214ENST00000560402 TRAV26-1A0A087WT03 109 aa9.42□□□□□ -0.9
SMAD3-214ENST00000560402 NXPH4O95158 308 aa9.42□□□□□ -0.9
SMAD3-214ENST00000560402 LEPROTL1O95214 131 aa9.42□□□□□ -0.9
SMAD3-214ENST00000560402 DAZ2Q13117 558 aaKnown RBP9.42□□□□□ -0.9
SMAD3-214ENST00000560402 FAM19A2Q8N3H0 131 aa9.42□□□□□ -0.9
SMAD3-214ENST00000560402 RNF185Q96GF1 192 aa9.42□□□□□ -0.9
SMAD3-214ENST00000560402 Q9H8V8 135 aa9.42□□□□□ -0.9
SMAD3-214ENST00000560402 GAGE12BA1L429 117 aa9.41□□□□□ -0.9
SMAD3-214ENST00000560402 GNRH2O43555 120 aa9.41□□□□□ -0.9
SMAD3-214ENST00000560402 GAGE7O76087 117 aa9.41□□□□□ -0.9
SMAD3-214ENST00000560402 GAGE12FP0CL80 117 aa9.41□□□□□ -0.9
SMAD3-214ENST00000560402 GAGE12GP0CL81 117 aa9.41□□□□□ -0.9
SMAD3-214ENST00000560402 GAGE12IP0CL82 117 aa9.41□□□□□ -0.9
SMAD3-214ENST00000560402 RNASE3P12724 160 aaKnown RBP9.41□□□□□ -0.9
SMAD3-214ENST00000560402 EVI2AP22794 236 aa9.41□□□□□ -0.9
SMAD3-214ENST00000560402 ZNF415Q09FC8 603 aa9.41□□□□□ -0.9
SMAD3-214ENST00000560402 KIR3DS1Q14943 382 aa9.41□□□□□ -0.9
SMAD3-214ENST00000560402 C18orf15Q96N68 181 aa9.41□□□□□ -0.9
SMAD3-214ENST00000560402 MRPS16Q9Y3D3 137 aaKnown RBP9.41□□□□□ -0.9
SMAD3-214ENST00000560402 IGHV3-16A0A0C4DH30 117 aa9.4□□□□□ -0.9
SMAD3-214ENST00000560402 IGHV1-24A0A0C4DH33 117 aa9.4□□□□□ -0.9
SMAD3-214ENST00000560402 TNFRSF6BO95407 300 aa9.4□□□□□ -0.9
SMAD3-214ENST00000560402 NCR2O95944 276 aa9.4□□□□□ -0.9
SMAD3-214ENST00000560402 NPYP01303 97 aa9.4□□□□□ -0.9
SMAD3-214ENST00000560402 MGPP08493 103 aa9.4□□□□□ -0.9
SMAD3-214ENST00000560402 PMCHL1Q16048 86 aa9.4□□□□□ -0.9
SMAD3-214ENST00000560402 Q6ZQT7 251 aa9.4□□□□□ -0.9
SMAD3-214ENST00000560402 LINC00467Q9BRT7 94 aa9.4□□□□□ -0.9
SMAD3-214ENST00000560402 MAP1LC3CQ9BXW4 147 aa9.4□□□□□ -0.9
SMAD3-214ENST00000560402 GSN-AS1Q9NRJ2 163 aa9.4□□□□□ -0.9
SMAD3-214ENST00000560402 LOC389332A0A1B0GUA5 103 aa9.39□□□□□ -0.91
SMAD3-214ENST00000560402 PKIAP61925 76 aa9.39□□□□□ -0.91
SMAD3-214ENST00000560402 C9orf85Q96MD7 179 aa9.39□□□□□ -0.91
SMAD3-214ENST00000560402 TMEM70Q9BUB7 260 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms