RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 GATD1Q8NB37 220 aa8.14□□□□□ -1.11
USP3-218ENST00000560202 C9orf118A6NHY6 69 aa8.13□□□□□ -1.11
USP3-218ENST00000560202 M0R381 172 aa8.13□□□□□ -1.11
USP3-218ENST00000560202 AZU1P20160 251 aa8.13□□□□□ -1.11
USP3-218ENST00000560202 KRTAP21-3Q3LHN1 58 aa8.13□□□□□ -1.11
USP3-218ENST00000560202 DNAH3Q8TD57 4116 aa8.13□□□□□ -1.11
USP3-218ENST00000560202 A8MZ25 164 aa8.12□□□□□ -1.11
USP3-218ENST00000560202 ZNF415Q09FC8 603 aa8.12□□□□□ -1.11
USP3-218ENST00000560202 LINC01545Q5VT33 79 aa8.12□□□□□ -1.11
USP3-218ENST00000560202 ZNF493Q6ZR52 646 aa8.12□□□□□ -1.11
USP3-218ENST00000560202 NEGR1Q7Z3B1 354 aa8.12□□□□□ -1.11
USP3-218ENST00000560202 C11orf72Q8NBR9 251 aa8.12□□□□□ -1.11
USP3-218ENST00000560202 K7EP34 96 aa8.11□□□□□ -1.11
USP3-218ENST00000560202 NXPH4O95158 308 aa8.11□□□□□ -1.11
USP3-218ENST00000560202 TMEM97Q5BJF2 176 aa8.11□□□□□ -1.11
USP3-218ENST00000560202 IGHV1-24A0A0C4DH33 117 aa8.11□□□□□ -1.11
USP3-218ENST00000560202 KPRPQ5T749 579 aaPredicted RBP8.11□□□□□ -1.11
USP3-218ENST00000560202 SYT8Q8NBV8 401 aa8.11□□□□□ -1.11
USP3-218ENST00000560202 TMEM263Q8WUH6 116 aaKnown RBP8.11□□□□□ -1.11
USP3-218ENST00000560202 TRAV8-6A0A0B4J262 113 aa8.1□□□□□ -1.11
USP3-218ENST00000560202 EVI2AP22794 236 aa8.1□□□□□ -1.11
USP3-218ENST00000560202 HSD52Q0P140 79 aa8.1□□□□□ -1.11
USP3-218ENST00000560202 RRN3P1Q2M238 152 aa8.1□□□□□ -1.11
USP3-218ENST00000560202 DEFB135Q30KP9 77 aa8.1□□□□□ -1.11
USP3-218ENST00000560202 ZNF876PQ49A33 203 aa8.1□□□□□ -1.11
USP3-218ENST00000560202 FAM104BQ5XKR9 115 aa8.1□□□□□ -1.11
USP3-218ENST00000560202 SPXQ9BT56 116 aa8.1□□□□□ -1.11
USP3-218ENST00000560202 M0R2P5 195 aa8.09□□□□□ -1.11
USP3-218ENST00000560202 AMN1Q8IY45 258 aa8.09□□□□□ -1.11
USP3-218ENST00000560202 IL17DQ8TAD2 202 aa8.09□□□□□ -1.11
USP3-218ENST00000560202 PTH2Q96A98 100 aa8.09□□□□□ -1.11
USP3-218ENST00000560202 C16orf74Q96GX8 76 aa8.09□□□□□ -1.11
USP3-218ENST00000560202 URB1-AS1Q96HZ7 61 aa8.09□□□□□ -1.11
USP3-218ENST00000560202 X6R8D5 127 aa8.09□□□□□ -1.11
USP3-218ENST00000560202 A0A1B0GV72 72 aa8.08□□□□□ -1.12
USP3-218ENST00000560202 J3QR89 54 aa8.08□□□□□ -1.12
USP3-218ENST00000560202 PRB2P02812 416 aaPredicted RBP8.08□□□□□ -1.12
USP3-218ENST00000560202 FA2HQ7L5A8 372 aa8.08□□□□□ -1.12
USP3-218ENST00000560202 C14orf178Q8N769 122 aaPredicted RBP8.08□□□□□ -1.12
USP3-218ENST00000560202 DNHD1Q96M86 4753 aa8.08□□□□□ -1.12
USP3-218ENST00000560202 hDV102S1A0JD36 115 aa8.08□□□□□ -1.12
USP3-218ENST00000560202 PLAC8L1A1L4L8 177 aa8.08□□□□□ -1.12
USP3-218ENST00000560202 SMIM9A6NGZ8 99 aa8.08□□□□□ -1.12
USP3-218ENST00000560202 RNF185Q96GF1 192 aa8.08□□□□□ -1.12
USP3-218ENST00000560202 JPT2Q9H910 190 aa8.08□□□□□ -1.12
USP3-218ENST00000560202 DAZ2Q13117 558 aaKnown RBP8.07□□□□□ -1.12
USP3-218ENST00000560202 MRPL51Q4U2R6 128 aaKnown RBP8.07□□□□□ -1.12
USP3-218ENST00000560202 PIK3CD-AS1Q5SR53 167 aa8.07□□□□□ -1.12
USP3-218ENST00000560202 C2orf91Q6ZV80 131 aa8.07□□□□□ -1.12
USP3-218ENST00000560202 MTURNQ8N3F0 131 aa8.07□□□□□ -1.12
USP3-218ENST00000560202 OR11H2Q8NH07 326 aa8.07□□□□□ -1.12
USP3-218ENST00000560202 RNF183Q96D59 192 aa8.07□□□□□ -1.12
USP3-218ENST00000560202 DPH3P1Q9H4G8 78 aa8.07□□□□□ -1.12
USP3-218ENST00000560202 MRPL16Q9NX20 251 aaKnown RBP8.07□□□□□ -1.12
USP3-218ENST00000560202 K7EIL1 84 aa8.06□□□□□ -1.12
USP3-218ENST00000560202 RASL10AQ92737 203 aa8.06□□□□□ -1.12
USP3-218ENST00000560202 NOP10Q9NPE3 64 aaKnown RBP8.06□□□□□ -1.12
USP3-218ENST00000560202 KIF25-AS1Q9Y6Z4 181 aa8.06□□□□□ -1.12
USP3-218ENST00000560202 MUC4Q99102 2169 aa8.06□□□□□ -1.12
USP3-218ENST00000560202 A0A087WWL8 130 aa8.05□□□□□ -1.12
USP3-218ENST00000560202 LGALS9BQ3B8N2 356 aa8.05□□□□□ -1.12
USP3-218ENST00000560202 LGALS9CQ6DKI2 356 aa8.05□□□□□ -1.12
USP3-218ENST00000560202 BOD1L2Q8IYS8 172 aa8.05□□□□□ -1.12
USP3-218ENST00000560202 OVOL2Q9BRP0 275 aa8.05□□□□□ -1.12
USP3-218ENST00000560202 MGAM2Q2M2H8 2515 aa8.05□□□□□ -1.12
USP3-218ENST00000560202 NBEAL1Q6ZS30 2694 aa8.05□□□□□ -1.12
USP3-218ENST00000560202 TRGV1A0A0A0MS02 117 aa8.05□□□□□ -1.12
USP3-218ENST00000560202 A8MWV9 139 aa8.05□□□□□ -1.12
USP3-218ENST00000560202 D6R8Y8 96 aa8.05□□□□□ -1.12
USP3-218ENST00000560202 CRYGDP07320 174 aa8.05□□□□□ -1.12
USP3-218ENST00000560202 MGPP08493 103 aa8.05□□□□□ -1.12
USP3-218ENST00000560202 FABP2P12104 132 aa8.05□□□□□ -1.12
USP3-218ENST00000560202 CKS2P33552 79 aa8.05□□□□□ -1.12
USP3-218ENST00000560202 EMP1P54849 157 aa8.05□□□□□ -1.12
USP3-218ENST00000560202 LINC00315P59091 139 aa8.05□□□□□ -1.12
USP3-218ENST00000560202 SIGMAR1Q99720 223 aa8.05□□□□□ -1.12
USP3-218ENST00000560202 AP5S1Q9NUS5 200 aa8.05□□□□□ -1.12
USP3-218ENST00000560202 U3KQK5 164 aa8.05□□□□□ -1.12
USP3-218ENST00000560202 NOTCH1P46531 2555 aa8.04□□□□□ -1.12
USP3-218ENST00000560202 A0A1W2PPM0 123 aa8.04□□□□□ -1.12
USP3-218ENST00000560202 SMKR1H3BMG3 65 aa8.04□□□□□ -1.12
USP3-218ENST00000560202 FGF6P10767 208 aa8.04□□□□□ -1.12
USP3-218ENST00000560202 FAM74A4Q5TZK3 123 aa8.04□□□□□ -1.12
USP3-218ENST00000560202 Q6ZTI0 123 aa8.04□□□□□ -1.12
USP3-218ENST00000560202 ORMDL3Q8N138 153 aa8.04□□□□□ -1.12
USP3-218ENST00000560202 POM121L12Q8N7R1 296 aa8.04□□□□□ -1.12
USP3-218ENST00000560202 TP53TG1Q9Y2A0 90 aa8.04□□□□□ -1.12
USP3-218ENST00000560202 IGHV4-28A0A0C4DH34 117 aa8.03□□□□□ -1.12
USP3-218ENST00000560202 NCR2O95944 276 aa8.03□□□□□ -1.12
USP3-218ENST00000560202 MIFP14174 115 aa8.03□□□□□ -1.12
USP3-218ENST00000560202 DEFB121Q5J5C9 76 aa8.03□□□□□ -1.12
USP3-218ENST00000560202 CFAP126Q5VTH2 177 aa8.03□□□□□ -1.12
USP3-218ENST00000560202 MRAP2Q96G30 205 aa8.03□□□□□ -1.12
USP3-218ENST00000560202 PRELID3AQ96N28 172 aa8.03□□□□□ -1.12
USP3-218ENST00000560202 HIGD1BQ9P298 99 aa8.03□□□□□ -1.12
USP3-218ENST00000560202 SPCS1Q9Y6A9 102 aa8.03□□□□□ -1.12
USP3-218ENST00000560202 NBEAL2Q6ZNJ1 2754 aa8.03□□□□□ -1.12
USP3-218ENST00000560202 TRAV26-2A0A0B4J265 109 aa8.02□□□□□ -1.13
USP3-218ENST00000560202 F5H697 171 aa8.02□□□□□ -1.13
USP3-218ENST00000560202 RS1O15537 224 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms