RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 WDR73Q6P4I2 378 aa5.82□□□□□ -1.48
USP3-217ENST00000560070 SMIM15Q7Z3B0 74 aa5.82□□□□□ -1.48
USP3-217ENST00000560070 TSKUQ8WUA8 353 aa5.82□□□□□ -1.48
USP3-217ENST00000560070 SMDT1Q9H4I9 107 aa5.82□□□□□ -1.48
USP3-217ENST00000560070 V9GYV3 84 aa5.82□□□□□ -1.48
USP3-217ENST00000560070 KMT2AQ03164 3969 aa5.82□□□□□ -1.48
USP3-217ENST00000560070 TRAV26-2A0A0B4J265 109 aa5.81□□□□□ -1.48
USP3-217ENST00000560070 HIGD1CA8MV81 97 aa5.81□□□□□ -1.48
USP3-217ENST00000560070 TMEM262E9PQX1 116 aa5.81□□□□□ -1.48
USP3-217ENST00000560070 CTRLP40313 264 aa5.81□□□□□ -1.48
USP3-217ENST00000560070 UBE2D3P61077 147 aa5.81□□□□□ -1.48
USP3-217ENST00000560070 UBE2D2P62837 147 aa5.81□□□□□ -1.48
USP3-217ENST00000560070 TNP2Q05952 138 aa5.81□□□□□ -1.48
USP3-217ENST00000560070 LINC00336Q6ZUF6 198 aa5.81□□□□□ -1.48
USP3-217ENST00000560070 BORCS7Q96B45 105 aa5.81□□□□□ -1.48
USP3-217ENST00000560070 DPH3P1Q9H4G8 78 aa5.81□□□□□ -1.48
USP3-217ENST00000560070 VPS13DQ5THJ4 4388 aa5.81□□□□□ -1.48
USP3-217ENST00000560070 TRBV10-1A0A0K0K1A3 114 aa5.8□□□□□ -1.48
USP3-217ENST00000560070 M0QY20 66 aa5.8□□□□□ -1.48
USP3-217ENST00000560070 LINC00694P0DN24 101 aa5.8□□□□□ -1.48
USP3-217ENST00000560070 TIRAPP58753 221 aa5.8□□□□□ -1.48
USP3-217ENST00000560070 RASL11AQ6T310 242 aa5.8□□□□□ -1.48
USP3-217ENST00000560070 GATD1Q8NB37 220 aa5.8□□□□□ -1.48
USP3-217ENST00000560070 Q9HAA7 133 aa5.8□□□□□ -1.48
USP3-217ENST00000560070 A0A087WWC5 75 aa5.79□□□□□ -1.48
USP3-217ENST00000560070 A0A1B0GUT8 65 aa5.79□□□□□ -1.48
USP3-217ENST00000560070 DNAH10OSP0CZ25 163 aa5.79□□□□□ -1.48
USP3-217ENST00000560070 CT83Q5H943 113 aa5.79□□□□□ -1.48
USP3-217ENST00000560070 DAZ4Q86SG3 579 aaKnown RBP5.79□□□□□ -1.48
USP3-217ENST00000560070 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.79□□□□□ -1.48
USP3-217ENST00000560070 NUP35Q8NFH5 326 aa5.79□□□□□ -1.48
USP3-217ENST00000560070 DAZ3Q9NR90 486 aaKnown RBP5.79□□□□□ -1.48
USP3-217ENST00000560070 H7C1H1 209 aa5.78□□□□□ -1.48
USP3-217ENST00000560070 CAMPP49913 170 aa5.78□□□□□ -1.48
USP3-217ENST00000560070 GAGE6Q13070 117 aa5.78□□□□□ -1.48
USP3-217ENST00000560070 RIGQ13278 110 aa5.78□□□□□ -1.48
USP3-217ENST00000560070 NTM-AS1Q6ZSK4 140 aa5.78□□□□□ -1.48
USP3-217ENST00000560070 COMMD7Q86VX2 200 aa5.78□□□□□ -1.48
USP3-217ENST00000560070 RPL39LQ96EH5 51 aaKnown RBP5.78□□□□□ -1.48
USP3-217ENST00000560070 DNAJC30Q96LL9 226 aa5.78□□□□□ -1.48
USP3-217ENST00000560070 CHCHD5Q9BSY4 110 aa5.78□□□□□ -1.48
USP3-217ENST00000560070 CNFNQ9BYD5 112 aa5.78□□□□□ -1.48
USP3-217ENST00000560070 GFRA4Q9GZZ7 299 aa5.78□□□□□ -1.48
USP3-217ENST00000560070 NIT2Q9NQR4 276 aa5.78□□□□□ -1.48
USP3-217ENST00000560070 NAT8BQ9UHF3 227 aa5.78□□□□□ -1.48
USP3-217ENST00000560070 MUC4Q99102 2169 aa5.77□□□□□ -1.49
USP3-217ENST00000560070 A0A087WX48 190 aa5.77□□□□□ -1.49
USP3-217ENST00000560070 TRBV6-8A0A0A6YYG3 113 aa5.77□□□□□ -1.49
USP3-217ENST00000560070 SMIM27A0A1W2PRY6 76 aa5.77□□□□□ -1.49
USP3-217ENST00000560070 F8W036 122 aa5.77□□□□□ -1.49
USP3-217ENST00000560070 SMKR1H3BMG3 65 aa5.77□□□□□ -1.49
USP3-217ENST00000560070 GAS8-AS1O95177 125 aa5.77□□□□□ -1.49
USP3-217ENST00000560070 FUSP35637 526 aaKnown RBP eCLIP5.77□□□□□ -1.49
USP3-217ENST00000560070 LINC01556Q5JQF7 62 aa5.77□□□□□ -1.49
USP3-217ENST00000560070 MRPL54Q6P161 138 aaKnown RBP5.77□□□□□ -1.49
USP3-217ENST00000560070 KCNIP4Q6PIL6 250 aa5.77□□□□□ -1.49
USP3-217ENST00000560070 NIT1Q86X76 327 aa5.77□□□□□ -1.49
USP3-217ENST00000560070 AMN1Q8IY45 258 aa5.77□□□□□ -1.49
USP3-217ENST00000560070 KLK12Q9UKR0 248 aa5.77□□□□□ -1.49
USP3-217ENST00000560070 URGCP-MRPS24S4R325 110 aa5.77□□□□□ -1.49
USP3-217ENST00000560070 A0A1B0GVY2 172 aa5.76□□□□□ -1.49
USP3-217ENST00000560070 TMEM218A2RU14 115 aa5.76□□□□□ -1.49
USP3-217ENST00000560070 FAM231BA6NCW3 169 aa5.76□□□□□ -1.49
USP3-217ENST00000560070 IBA57-AS1B1ANH7 110 aa5.76□□□□□ -1.49
USP3-217ENST00000560070 PSCAO43653 123 aa5.76□□□□□ -1.49
USP3-217ENST00000560070 RAB4AP20338 218 aa5.76□□□□□ -1.49
USP3-217ENST00000560070 NFE4Q86UQ8 179 aa5.76□□□□□ -1.49
USP3-217ENST00000560070 C10orf126Q8N4M7 172 aa5.76□□□□□ -1.49
USP3-217ENST00000560070 RNF185Q96GF1 192 aa5.76□□□□□ -1.49
USP3-217ENST00000560070 IGHV1-24A0A0C4DH33 117 aa5.75□□□□□ -1.49
USP3-217ENST00000560070 NCR2O95944 276 aa5.75□□□□□ -1.49
USP3-217ENST00000560070 MT-ND4LP03901 98 aa5.75□□□□□ -1.49
USP3-217ENST00000560070 PMCHP20382 165 aa5.75□□□□□ -1.49
USP3-217ENST00000560070 KRTAP19-1Q8IUB9 90 aa5.75□□□□□ -1.49
USP3-217ENST00000560070 Q8N976 141 aa5.75□□□□□ -1.49
USP3-217ENST00000560070 UBE2WQ96B02 151 aa5.75□□□□□ -1.49
USP3-217ENST00000560070 TMEM191AQ9H0A3 160 aa5.75□□□□□ -1.49
USP3-217ENST00000560070 TRBV25-1A0A075B6N4 114 aa5.74□□□□□ -1.49
USP3-217ENST00000560070 PPP1R2P9O14990 202 aa5.74□□□□□ -1.49
USP3-217ENST00000560070 ANGP03950 147 aaKnown RBP5.74□□□□□ -1.49
USP3-217ENST00000560070 ADCYAP1P18509 176 aa5.74□□□□□ -1.49
USP3-217ENST00000560070 COTL1Q14019 142 aa5.74□□□□□ -1.49
USP3-217ENST00000560070 TMEM97Q5BJF2 176 aa5.74□□□□□ -1.49
USP3-217ENST00000560070 ATRAIDQ6UW56 229 aa5.74□□□□□ -1.49
USP3-217ENST00000560070 UQCC3Q6UW78 93 aa5.74□□□□□ -1.49
USP3-217ENST00000560070 Q6ZRN7 208 aaPredicted RBP5.74□□□□□ -1.49
USP3-217ENST00000560070 SPATA12Q7Z6I5 190 aa5.74□□□□□ -1.49
USP3-217ENST00000560070 KRTAP4-7Q9BYR0 210 aa5.74□□□□□ -1.49
USP3-217ENST00000560070 LINC00862A6NCI5 91 aa5.73□□□□□ -1.49
USP3-217ENST00000560070 SDHAF1A6NFY7 115 aa5.73□□□□□ -1.49
USP3-217ENST00000560070 K7EP13 123 aa5.73□□□□□ -1.49
USP3-217ENST00000560070 LECT2O14960 151 aa5.73□□□□□ -1.49
USP3-217ENST00000560070 RPS10P46783 165 aaKnown RBP5.73□□□□□ -1.49
USP3-217ENST00000560070 AMTP48728 403 aa5.73□□□□□ -1.49
USP3-217ENST00000560070 RBX1P62877 108 aa5.73□□□□□ -1.49
USP3-217ENST00000560070 PNRC1Q12796 327 aaPredicted RBP5.73□□□□□ -1.49
USP3-217ENST00000560070 MRPL51Q4U2R6 128 aaKnown RBP5.73□□□□□ -1.49
USP3-217ENST00000560070 MPV17L2Q567V2 206 aa5.73□□□□□ -1.49
USP3-217ENST00000560070 FAM104BQ5XKR9 115 aa5.73□□□□□ -1.49
USP3-217ENST00000560070 CLPSL2Q6UWE3 100 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms