RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 APLNQ9ULZ1 77 aa10.01□□□□□ -0.81
SMAD6-204ENST00000559931 A0A096LPF7 62 aa10□□□□□ -0.81
SMAD6-204ENST00000559931 TGIF2-C20orf24A0A0A6YYL0 155 aa10□□□□□ -0.81
SMAD6-204ENST00000559931 M0QY20 66 aa10□□□□□ -0.81
SMAD6-204ENST00000559931 RPL36AP83881 106 aaKnown RBP10□□□□□ -0.81
SMAD6-204ENST00000559931 ELOBQ15370 118 aa10□□□□□ -0.81
SMAD6-204ENST00000559931 GATD1Q8NB37 220 aa10□□□□□ -0.81
SMAD6-204ENST00000559931 ZNRF2Q8NHG8 242 aa10□□□□□ -0.81
SMAD6-204ENST00000559931 RPL36ALQ969Q0 106 aaKnown RBP10□□□□□ -0.81
SMAD6-204ENST00000559931 RNF185Q96GF1 192 aa10□□□□□ -0.81
SMAD6-204ENST00000559931 TNFRSF18Q9Y5U5 241 aa10□□□□□ -0.81
SMAD6-204ENST00000559931 TRBV10-1A0A0K0K1A3 114 aa9.99□□□□□ -0.81
SMAD6-204ENST00000559931 CKS2P33552 79 aa9.99□□□□□ -0.81
SMAD6-204ENST00000559931 MRPL51Q4U2R6 128 aaKnown RBP9.99□□□□□ -0.81
SMAD6-204ENST00000559931 MRAP2Q96G30 205 aa9.99□□□□□ -0.81
SMAD6-204ENST00000559931 Q9UF83 564 aa9.99□□□□□ -0.81
SMAD6-204ENST00000559931 TRBV7-3A0A075B6L6 115 aa9.98□□□□□ -0.81
SMAD6-204ENST00000559931 COX19Q49B96 90 aa9.98□□□□□ -0.81
SMAD6-204ENST00000559931 NEGR1Q7Z3B1 354 aa9.98□□□□□ -0.81
SMAD6-204ENST00000559931 SH2D6Q7Z4S9 175 aa9.98□□□□□ -0.81
SMAD6-204ENST00000559931 FRZBQ92765 325 aa9.98□□□□□ -0.81
SMAD6-204ENST00000559931 NIT2Q9NQR4 276 aa9.98□□□□□ -0.81
SMAD6-204ENST00000559931 PLECQ15149 4684 aaKnown RBP9.97□□□□□ -0.81
SMAD6-204ENST00000559931 SMKR1H3BMG3 65 aa9.97□□□□□ -0.81
SMAD6-204ENST00000559931 S100A6P06703 90 aa9.97□□□□□ -0.81
SMAD6-204ENST00000559931 OR10J3Q5JRS4 329 aa9.97□□□□□ -0.81
SMAD6-204ENST00000559931 TMEM136Q6ZRR5 245 aa9.97□□□□□ -0.81
SMAD6-204ENST00000559931 NEXN-AS1Q8NBZ9 246 aa9.97□□□□□ -0.81
SMAD6-204ENST00000559931 ATP6V0E2Q8NHE4 81 aa9.97□□□□□ -0.81
SMAD6-204ENST00000559931 DNAJC30Q96LL9 226 aa9.97□□□□□ -0.81
SMAD6-204ENST00000559931 TRBV24-1A0A075B6N3 115 aa9.96□□□□□ -0.82
SMAD6-204ENST00000559931 NCR2O95944 276 aa9.96□□□□□ -0.82
SMAD6-204ENST00000559931 APCSP02743 223 aa9.96□□□□□ -0.82
SMAD6-204ENST00000559931 UBE2DNLQ8IWF7 75 aa9.96□□□□□ -0.82
SMAD6-204ENST00000559931 RPL39LQ96EH5 51 aaKnown RBP9.96□□□□□ -0.82
SMAD6-204ENST00000559931 YPEL4Q96NS1 127 aa9.96□□□□□ -0.82
SMAD6-204ENST00000559931 GNB1LQ9BYB4 327 aa9.96□□□□□ -0.82
SMAD6-204ENST00000559931 D6R8Y8 96 aa9.95□□□□□ -0.82
SMAD6-204ENST00000559931 GAS8-AS1O95177 125 aa9.95□□□□□ -0.82
SMAD6-204ENST00000559931 PPP1R17O96001 155 aa9.95□□□□□ -0.82
SMAD6-204ENST00000559931 HLA-DQA1P01909 254 aa9.95□□□□□ -0.82
SMAD6-204ENST00000559931 CCL18P55774 89 aa9.95□□□□□ -0.82
SMAD6-204ENST00000559931 PPBPP02775 128 aa9.94□□□□□ -0.82
SMAD6-204ENST00000559931 MT-ND6P03923 174 aa9.94□□□□□ -0.82
SMAD6-204ENST00000559931 RPS10P46783 165 aaKnown RBP9.94□□□□□ -0.82
SMAD6-204ENST00000559931 UBE2D3P61077 147 aa9.94□□□□□ -0.82
SMAD6-204ENST00000559931 UBE2D2P62837 147 aa9.94□□□□□ -0.82
SMAD6-204ENST00000559931 FABP9Q0Z7S8 132 aa9.94□□□□□ -0.82
SMAD6-204ENST00000559931 LYPD5Q6UWN5 251 aa9.94□□□□□ -0.82
SMAD6-204ENST00000559931 ORMDL3Q8N138 153 aa9.94□□□□□ -0.82
SMAD6-204ENST00000559931 ST20Q9HBF5 79 aa9.94□□□□□ -0.82
SMAD6-204ENST00000559931 TRAPPC1Q9Y5R8 145 aa9.94□□□□□ -0.82
SMAD6-204ENST00000559931 IGHV3-38A0A0C4DH36 116 aa9.93□□□□□ -0.82
SMAD6-204ENST00000559931 ESRGQ1W209 222 aa9.93□□□□□ -0.82
SMAD6-204ENST00000559931 KIAA1644Q3SXP7 199 aa9.93□□□□□ -0.82
SMAD6-204ENST00000559931 PRELID3AQ96N28 172 aa9.93□□□□□ -0.82
SMAD6-204ENST00000559931 MRPL18Q9H0U6 180 aaKnown RBP9.93□□□□□ -0.82
SMAD6-204ENST00000559931 GTSF1LQ9H1H1 148 aa9.93□□□□□ -0.82
SMAD6-204ENST00000559931 ALMS1Q8TCU4 4167 aa9.93□□□□□ -0.82
SMAD6-204ENST00000559931 DNAH1Q9P2D7 4330 aa9.92□□□□□ -0.82
SMAD6-204ENST00000559931 DAZ4Q86SG3 579 aaKnown RBP9.92□□□□□ -0.82
SMAD6-204ENST00000559931 DAZ3Q9NR90 486 aaKnown RBP9.92□□□□□ -0.82
SMAD6-204ENST00000559931 KMT2CQ8NEZ4 4911 aaKnown RBP9.91□□□□□ -0.82
SMAD6-204ENST00000559931 SDHAF1A6NFY7 115 aa9.91□□□□□ -0.82
SMAD6-204ENST00000559931 TNFRSF6BO95407 300 aa9.91□□□□□ -0.82
SMAD6-204ENST00000559931 LINC00694P0DN24 101 aa9.91□□□□□ -0.82
SMAD6-204ENST00000559931 PMCHP20382 165 aa9.91□□□□□ -0.82
SMAD6-204ENST00000559931 NRACQ8N912 160 aa9.91□□□□□ -0.82
SMAD6-204ENST00000559931 DEFB104AQ8WTQ1 72 aa9.91□□□□□ -0.82
SMAD6-204ENST00000559931 LYSTQ99698 3801 aa9.91□□□□□ -0.82
SMAD6-204ENST00000559931 TRBV6-5A0A0K0K1A5 114 aa9.9□□□□□ -0.82
SMAD6-204ENST00000559931 LY6G6CO95867 125 aa9.9□□□□□ -0.82
SMAD6-204ENST00000559931 NPYP01303 97 aa9.9□□□□□ -0.82
SMAD6-204ENST00000559931 AKR1D1P51857 326 aa9.9□□□□□ -0.82
SMAD6-204ENST00000559931 SUMO2P61956 95 aaKnown RBP9.9□□□□□ -0.82
SMAD6-204ENST00000559931 LINC00588Q9Y4M8 146 aa9.9□□□□□ -0.82
SMAD6-204ENST00000559931 SACSQ9NZJ4 4579 aa9.89□□□□□ -0.83
SMAD6-204ENST00000559931 TRAV8-6A0A0B4J262 113 aa9.89□□□□□ -0.83
SMAD6-204ENST00000559931 VCYO14598 125 aa9.89□□□□□ -0.83
SMAD6-204ENST00000559931 TMEM97Q5BJF2 176 aa9.89□□□□□ -0.83
SMAD6-204ENST00000559931 C20orf78Q9BR46 151 aa9.89□□□□□ -0.83
SMAD6-204ENST00000559931 LOC389332A0A1B0GUA5 103 aa9.88□□□□□ -0.83
SMAD6-204ENST00000559931 C5orf52A6NGY3 159 aa9.88□□□□□ -0.83
SMAD6-204ENST00000559931 I3L3M4 83 aa9.88□□□□□ -0.83
SMAD6-204ENST00000559931 PHOX2AO14813 284 aa9.88□□□□□ -0.83
SMAD6-204ENST00000559931 TIRAPP58753 221 aa9.88□□□□□ -0.83
SMAD6-204ENST00000559931 SNRPEP62304 92 aaKnown RBP9.88□□□□□ -0.83
SMAD6-204ENST00000559931 COTL1Q14019 142 aa9.88□□□□□ -0.83
SMAD6-204ENST00000559931 LELP1Q5T871 98 aa9.88□□□□□ -0.83
SMAD6-204ENST00000559931 LGALS9CQ6DKI2 356 aa9.88□□□□□ -0.83
SMAD6-204ENST00000559931 TMEM70Q9BUB7 260 aa9.88□□□□□ -0.83
SMAD6-204ENST00000559931 MAP1LC3AQ9H492 121 aa9.88□□□□□ -0.83
SMAD6-204ENST00000559931 LAMTOR2Q9Y2Q5 125 aa9.88□□□□□ -0.83
SMAD6-204ENST00000559931 POLR2KP53803 58 aaKnown RBP9.87□□□□□ -0.83
SMAD6-204ENST00000559931 MRPS16Q9Y3D3 137 aaKnown RBP9.87□□□□□ -0.83
SMAD6-204ENST00000559931 TRBV6-8A0A0A6YYG3 113 aa9.86□□□□□ -0.83
SMAD6-204ENST00000559931 FCER1GP30273 86 aa9.86□□□□□ -0.83
SMAD6-204ENST00000559931 LINC00518Q8N0U6 118 aa9.86□□□□□ -0.83
SMAD6-204ENST00000559931 KIR2DL4Q99706 377 aa9.86□□□□□ -0.83
SMAD6-204ENST00000559931 ALKBH7Q9BT30 221 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms