RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 FLG2Q5D862 2391 aaPredicted RBP8.06□□□□□ -1.12
SPG11-219ENST00000559822 ANGP03950 147 aaKnown RBP8.05□□□□□ -1.12
SPG11-219ENST00000559822 RAB5CP51148 216 aa8.05□□□□□ -1.12
SPG11-219ENST00000559822 C11orf52Q96A22 123 aa8.05□□□□□ -1.12
SPG11-219ENST00000559822 DAZAP1Q96EP5 407 aaKnown RBP8.05□□□□□ -1.12
SPG11-219ENST00000559822 H7C1H1 209 aa8.04□□□□□ -1.12
SPG11-219ENST00000559822 J3QL48 77 aa8.04□□□□□ -1.12
SPG11-219ENST00000559822 RPS20P60866 119 aaKnown RBP8.04□□□□□ -1.12
SPG11-219ENST00000559822 MIAQ16674 131 aa8.04□□□□□ -1.12
SPG11-219ENST00000559822 MPV17L2Q567V2 206 aa8.04□□□□□ -1.12
SPG11-219ENST00000559822 C15orf54Q8N8G6 183 aa8.04□□□□□ -1.12
SPG11-219ENST00000559822 SMIM12Q96EX1 92 aa8.04□□□□□ -1.12
SPG11-219ENST00000559822 DNAJC30Q96LL9 226 aa8.04□□□□□ -1.12
SPG11-219ENST00000559822 GNG13Q9P2W3 67 aa8.04□□□□□ -1.12
SPG11-219ENST00000559822 VAX2Q9UIW0 290 aa8.04□□□□□ -1.12
SPG11-219ENST00000559822 TRBV25-1A0A075B6N4 114 aa8.03□□□□□ -1.12
SPG11-219ENST00000559822 TRAV1-1A0A0B4J248 108 aa8.03□□□□□ -1.12
SPG11-219ENST00000559822 MUC21A0A0G2JKD1 596 aa8.03□□□□□ -1.12
SPG11-219ENST00000559822 MUC21A0A140T8X8 626 aa8.03□□□□□ -1.12
SPG11-219ENST00000559822 XKRY2A2RUG3 117 aa8.03□□□□□ -1.12
SPG11-219ENST00000559822 CENPWQ5EE01 88 aa8.03□□□□□ -1.12
SPG11-219ENST00000559822 SCXQ7RTU7 201 aa8.03□□□□□ -1.12
SPG11-219ENST00000559822 DEFB104AQ8WTQ1 72 aa8.03□□□□□ -1.12
SPG11-219ENST00000559822 CHAC1Q9BUX1 264 aa8.03□□□□□ -1.12
SPG11-219ENST00000559822 VPS13BQ7Z7G8 4022 aa8.02□□□□□ -1.12
SPG11-219ENST00000559822 SSTP61278 116 aa8.02□□□□□ -1.13
SPG11-219ENST00000559822 CACNG7P62955 275 aa8.02□□□□□ -1.13
SPG11-219ENST00000559822 LINC01620Q4KN68 170 aa8.02□□□□□ -1.13
SPG11-219ENST00000559822 ENHOQ6UWT2 76 aa8.02□□□□□ -1.13
SPG11-219ENST00000559822 FER1L6-AS1Q8NA97 138 aa8.02□□□□□ -1.13
SPG11-219ENST00000559822 DERL1Q9BUN8 251 aa8.02□□□□□ -1.13
SPG11-219ENST00000559822 TPPP3Q9BW30 176 aa8.02□□□□□ -1.13
SPG11-219ENST00000559822 BIN3Q9NQY0 253 aa8.02□□□□□ -1.13
SPG11-219ENST00000559822 PDE6DO43924 150 aa8.01□□□□□ -1.13
SPG11-219ENST00000559822 IFNA1P01562 189 aa8.01□□□□□ -1.13
SPG11-219ENST00000559822 HLA-DQA1P01909 254 aa8.01□□□□□ -1.13
SPG11-219ENST00000559822 MGPP08493 103 aa8.01□□□□□ -1.13
SPG11-219ENST00000559822 GNG4P50150 75 aa8.01□□□□□ -1.13
SPG11-219ENST00000559822 CCL20P78556 96 aa8.01□□□□□ -1.13
SPG11-219ENST00000559822 OR2D3Q8NGH3 330 aa8.01□□□□□ -1.13
SPG11-219ENST00000559822 KIF25-AS1Q9Y6Z4 181 aa8.01□□□□□ -1.13
SPG11-219ENST00000559822 DNAH8Q96JB1 4490 aa8.01□□□□□ -1.13
SPG11-219ENST00000559822 MYCBP2O75592 4640 aa8.01□□□□□ -1.13
SPG11-219ENST00000559822 IGHV1-24A0A0C4DH33 117 aa8□□□□□ -1.13
SPG11-219ENST00000559822 F2Z2F3 143 aa8□□□□□ -1.13
SPG11-219ENST00000559822 P01737 135 aa8□□□□□ -1.13
SPG11-219ENST00000559822 TRGC1P0CF51 173 aa8□□□□□ -1.13
SPG11-219ENST00000559822 IGLC6P0CF74 106 aa8□□□□□ -1.13
SPG11-219ENST00000559822 MEF2BQ02080 365 aaPredicted RBP8□□□□□ -1.13
SPG11-219ENST00000559822 IQCJQ1A5X6 159 aa8□□□□□ -1.13
SPG11-219ENST00000559822 HERC1Q15751 4861 aa8□□□□□ -1.13
SPG11-219ENST00000559822 USP17L23D6RBM5 183 aa7.99□□□□□ -1.13
SPG11-219ENST00000559822 SULT1A2P50226 295 aa7.99□□□□□ -1.13
SPG11-219ENST00000559822 RBX1P62877 108 aa7.99□□□□□ -1.13
SPG11-219ENST00000559822 GAGE6Q13070 117 aa7.99□□□□□ -1.13
SPG11-219ENST00000559822 DGAT2L7PQ6IED9 249 aa7.99□□□□□ -1.13
SPG11-219ENST00000559822 NTM-AS1Q6ZSK4 140 aa7.99□□□□□ -1.13
SPG11-219ENST00000559822 CIRBP-AS1Q8TBR5 109 aa7.99□□□□□ -1.13
SPG11-219ENST00000559822 PRR34Q9NV39 138 aa7.99□□□□□ -1.13
SPG11-219ENST00000559822 C19orf71A6NCJ1 209 aa7.98□□□□□ -1.13
SPG11-219ENST00000559822 KRTAP29-1A8MX34 341 aaPredicted RBP7.98□□□□□ -1.13
SPG11-219ENST00000559822 M0QY20 66 aa7.98□□□□□ -1.13
SPG11-219ENST00000559822 IGLV2-8P01709 118 aa7.98□□□□□ -1.13
SPG11-219ENST00000559822 GZMBP10144 247 aa7.98□□□□□ -1.13
SPG11-219ENST00000559822 TAGLN2P37802 199 aaKnown RBP7.98□□□□□ -1.13
SPG11-219ENST00000559822 MED9Q9NWA0 146 aa7.98□□□□□ -1.13
SPG11-219ENST00000559822 RAB19A4D1S5 217 aa7.97□□□□□ -1.13
SPG11-219ENST00000559822 BCL2P10415 239 aa7.97□□□□□ -1.13
SPG11-219ENST00000559822 SUMO4Q6EEV6 95 aa7.97□□□□□ -1.13
SPG11-219ENST00000559822 RASL11AQ6T310 242 aa7.97□□□□□ -1.13
SPG11-219ENST00000559822 CLPSL2Q6UWE3 100 aa7.97□□□□□ -1.13
SPG11-219ENST00000559822 LINC00269Q8N2A0 174 aa7.97□□□□□ -1.13
SPG11-219ENST00000559822 TMEM243Q9BU79 118 aa7.97□□□□□ -1.13
SPG11-219ENST00000559822 DPH3P1Q9H4G8 78 aa7.97□□□□□ -1.13
SPG11-219ENST00000559822 TRAV8-4A0A0B4J246 113 aa7.96□□□□□ -1.14
SPG11-219ENST00000559822 NKX2-5P52952 324 aaPredicted RBP7.96□□□□□ -1.14
SPG11-219ENST00000559822 REG3AQ06141 175 aa7.96□□□□□ -1.14
SPG11-219ENST00000559822 WDR73Q6P4I2 378 aa7.96□□□□□ -1.14
SPG11-219ENST00000559822 CLRN3Q8NCR9 226 aa7.96□□□□□ -1.14
SPG11-219ENST00000559822 PGLYRP4Q96LB8 373 aa7.96□□□□□ -1.14
SPG11-219ENST00000559822 NIT2Q9NQR4 276 aa7.96□□□□□ -1.14
SPG11-219ENST00000559822 A0A1B0GUV1 79 aa7.95□□□□□ -1.14
SPG11-219ENST00000559822 UBE2L6O14933 153 aa7.95□□□□□ -1.14
SPG11-219ENST00000559822 PRSS1P07477 247 aa7.95□□□□□ -1.14
SPG11-219ENST00000559822 NTF3P20783 257 aa7.95□□□□□ -1.14
SPG11-219ENST00000559822 LYZL1Q6UWQ5 148 aa7.95□□□□□ -1.14
SPG11-219ENST00000559822 SLC51BQ86UW2 128 aa7.95□□□□□ -1.14
SPG11-219ENST00000559822 TCTE3Q8IZS6 198 aa7.95□□□□□ -1.14
SPG11-219ENST00000559822 C9orf62Q8N4C0 152 aa7.95□□□□□ -1.14
SPG11-219ENST00000559822 C9orf163Q8N9P6 203 aa7.95□□□□□ -1.14
SPG11-219ENST00000559822 TRBV20OR9-2A0A075B6H5 130 aa7.94□□□□□ -1.14
SPG11-219ENST00000559822 CTRLP40313 264 aa7.94□□□□□ -1.14
SPG11-219ENST00000559822 COTL1Q14019 142 aa7.94□□□□□ -1.14
SPG11-219ENST00000559822 KRTAP26-1Q6PEX3 210 aa7.94□□□□□ -1.14
SPG11-219ENST00000559822 AMTP48728 403 aa7.93□□□□□ -1.14
SPG11-219ENST00000559822 SMIM15Q7Z3B0 74 aa7.93□□□□□ -1.14
SPG11-219ENST00000559822 C20orf203Q8NBC4 194 aa7.93□□□□□ -1.14
SPG11-219ENST00000559822 NUDT10Q8NFP7 164 aa7.93□□□□□ -1.14
SPG11-219ENST00000559822 NUDT11Q96G61 164 aa7.93□□□□□ -1.14
SPG11-219ENST00000559822 RPP21Q9H633 154 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms