RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 ATRAIDQ6UW56 229 aa13.36□□□□□ -0.27
TSPAN3-206ENST00000559373 NTM-AS1Q6ZSK4 140 aa13.36□□□□□ -0.27
TSPAN3-206ENST00000559373 CHCHD7Q9BUK0 85 aa13.36□□□□□ -0.27
TSPAN3-206ENST00000559373 SSBP4Q9BWG4 385 aaPredicted RBP13.36□□□□□ -0.27
TSPAN3-206ENST00000559373 C1orf43Q9BWL3 253 aa13.36□□□□□ -0.27
TSPAN3-206ENST00000559373 CRPP02741 224 aa13.35□□□□□ -0.27
TSPAN3-206ENST00000559373 RPL35P42766 123 aaKnown RBP13.35□□□□□ -0.27
TSPAN3-206ENST00000559373 Q0VG73 95 aa13.35□□□□□ -0.27
TSPAN3-206ENST00000559373 CIRBP-AS1Q8TBR5 109 aa13.35□□□□□ -0.27
TSPAN3-206ENST00000559373 TPPP3Q9BW30 176 aa13.35□□□□□ -0.27
TSPAN3-206ENST00000559373 A0A0D9SG52 128 aa13.34□□□□□ -0.27
TSPAN3-206ENST00000559373 HMSDA8MTL9 139 aa13.34□□□□□ -0.27
TSPAN3-206ENST00000559373 OR5AL1P0C617 328 aa13.34□□□□□ -0.27
TSPAN3-206ENST00000559373 GAGE6Q13070 117 aa13.34□□□□□ -0.27
TSPAN3-206ENST00000559373 DEFB104AQ8WTQ1 72 aa13.34□□□□□ -0.27
TSPAN3-206ENST00000559373 CHAC1Q9BUX1 264 aa13.34□□□□□ -0.27
TSPAN3-206ENST00000559373 GNG13Q9P2W3 67 aa13.34□□□□□ -0.27
TSPAN3-206ENST00000559373 CXCL1P09341 107 aa13.33□□□□□ -0.28
TSPAN3-206ENST00000559373 KIF25-AS1Q9Y6Z4 181 aa13.33□□□□□ -0.28
TSPAN3-206ENST00000559373 MGPP08493 103 aa13.32□□□□□ -0.28
TSPAN3-206ENST00000559373 SMIM17P0DL12 118 aa13.32□□□□□ -0.28
TSPAN3-206ENST00000559373 USP17L23D6RBM5 183 aa13.31□□□□□ -0.28
TSPAN3-206ENST00000559373 RAB19A4D1S5 217 aa13.3□□□□□ -0.28
TSPAN3-206ENST00000559373 IGLV2-8P01709 118 aa13.3□□□□□ -0.28
TSPAN3-206ENST00000559373 CENPWQ5EE01 88 aa13.3□□□□□ -0.28
TSPAN3-206ENST00000559373 LINC00269Q8N2A0 174 aa13.3□□□□□ -0.28
TSPAN3-206ENST00000559373 PRSS1P07477 247 aa13.29□□□□□ -0.28
TSPAN3-206ENST00000559373 KRTAP10-4P60372 401 aaPredicted RBP13.29□□□□□ -0.28
TSPAN3-206ENST00000559373 RBX1P62877 108 aa13.29□□□□□ -0.28
TSPAN3-206ENST00000559373 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.29□□□□□ -0.28
TSPAN3-206ENST00000559373 AP1S3Q96PC3 154 aa13.29□□□□□ -0.28
TSPAN3-206ENST00000559373 OR2D3Q8NGH3 330 aa13.28□□□□□ -0.28
TSPAN3-206ENST00000559373 VAX2Q9UIW0 290 aa13.28□□□□□ -0.28
TSPAN3-206ENST00000559373 IGLV10-54A0A075B6I4 117 aa13.27□□□□□ -0.29
TSPAN3-206ENST00000559373 C14orf177Q52M58 125 aa13.27□□□□□ -0.29
TSPAN3-206ENST00000559373 SUMO4Q6EEV6 95 aa13.27□□□□□ -0.29
TSPAN3-206ENST00000559373 FER1L6-AS1Q8NA97 138 aa13.27□□□□□ -0.29
TSPAN3-206ENST00000559373 MANBALQ9NQG1 85 aa13.27□□□□□ -0.29
TSPAN3-206ENST00000559373 TRBV25-1A0A075B6N4 114 aa13.26□□□□□ -0.29
TSPAN3-206ENST00000559373 KRTAP29-1A8MX34 341 aaPredicted RBP13.26□□□□□ -0.29
TSPAN3-206ENST00000559373 LRP1Q07954 4544 aaKnown RBP13.26□□□□□ -0.29
TSPAN3-206ENST00000559373 MIAQ16674 131 aa13.26□□□□□ -0.29
TSPAN3-206ENST00000559373 C11orf52Q96A22 123 aa13.26□□□□□ -0.29
TSPAN3-206ENST00000559373 DAZAP1Q96EP5 407 aaKnown RBP13.26□□□□□ -0.29
TSPAN3-206ENST00000559373 M0QY20 66 aa13.25□□□□□ -0.29
TSPAN3-206ENST00000559373 IGLC6P0CF74 106 aa13.25□□□□□ -0.29
TSPAN3-206ENST00000559373 NKX2-5P52952 324 aaPredicted RBP13.25□□□□□ -0.29
TSPAN3-206ENST00000559373 EIF5AP63241 154 aaKnown RBP13.25□□□□□ -0.29
TSPAN3-206ENST00000559373 KRTAP26-1Q6PEX3 210 aa13.25□□□□□ -0.29
TSPAN3-206ENST00000559373 RAB5CP51148 216 aa13.24□□□□□ -0.29
TSPAN3-206ENST00000559373 IGHV1-24A0A0C4DH33 117 aa13.23□□□□□ -0.29
TSPAN3-206ENST00000559373 C19orf71A6NCJ1 209 aa13.23□□□□□ -0.29
TSPAN3-206ENST00000559373 GNG4P50150 75 aa13.23□□□□□ -0.29
TSPAN3-206ENST00000559373 PRR34Q9NV39 138 aa13.23□□□□□ -0.29
TSPAN3-206ENST00000559373 PANO1I0J062 215 aa13.22□□□□□ -0.29
TSPAN3-206ENST00000559373 TMEM97Q5BJF2 176 aa13.22□□□□□ -0.29
TSPAN3-206ENST00000559373 LYZL1Q6UWQ5 148 aa13.22□□□□□ -0.29
TSPAN3-206ENST00000559373 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.22□□□□□ -0.29
TSPAN3-206ENST00000559373 TRBV20OR9-2A0A075B6H5 130 aa13.21□□□□□ -0.29
TSPAN3-206ENST00000559373 IGLV4-60A0A075B6I1 120 aa13.21□□□□□ -0.29
TSPAN3-206ENST00000559373 PKIAP61925 76 aa13.21□□□□□ -0.29
TSPAN3-206ENST00000559373 REG3AQ06141 175 aa13.21□□□□□ -0.29
TSPAN3-206ENST00000559373 IQCJQ1A5X6 159 aa13.21□□□□□ -0.29
TSPAN3-206ENST00000559373 C20orf203Q8NBC4 194 aa13.21□□□□□ -0.29
TSPAN3-206ENST00000559373 GFRA4Q9GZZ7 299 aa13.21□□□□□ -0.29
TSPAN3-206ENST00000559373 MED9Q9NWA0 146 aa13.21□□□□□ -0.29
TSPAN3-206ENST00000559373 TRAV1-1A0A0B4J248 108 aa13.2□□□□□ -0.3
TSPAN3-206ENST00000559373 P01737 135 aa13.2□□□□□ -0.3
TSPAN3-206ENST00000559373 NTF3P20783 257 aa13.2□□□□□ -0.3
TSPAN3-206ENST00000559373 RPS20P60866 119 aaKnown RBP13.2□□□□□ -0.3
TSPAN3-206ENST00000559373 CACNG7P62955 275 aa13.19□□□□□ -0.3
TSPAN3-206ENST00000559373 MEF2BQ02080 365 aaPredicted RBP13.19□□□□□ -0.3
TSPAN3-206ENST00000559373 C9orf163Q8N9P6 203 aa13.19□□□□□ -0.3
TSPAN3-206ENST00000559373 H7C1H1 209 aa13.18□□□□□ -0.3
TSPAN3-206ENST00000559373 IFNA1P01562 189 aa13.18□□□□□ -0.3
TSPAN3-206ENST00000559373 SULT1A2P50226 295 aa13.18□□□□□ -0.3
TSPAN3-206ENST00000559373 HNRNPA3P51991 378 aaKnown RBP13.18□□□□□ -0.3
TSPAN3-206ENST00000559373 RPL37AP61513 92 aaKnown RBP13.18□□□□□ -0.3
TSPAN3-206ENST00000559373 RASL11AQ6T310 242 aa13.18□□□□□ -0.3
TSPAN3-206ENST00000559373 TMEM243Q9BU79 118 aa13.18□□□□□ -0.3
TSPAN3-206ENST00000559373 DGAT2L7PQ6IED9 249 aa13.17□□□□□ -0.3
TSPAN3-206ENST00000559373 NUDT10Q8NFP7 164 aa13.17□□□□□ -0.3
TSPAN3-206ENST00000559373 NUDT11Q96G61 164 aa13.17□□□□□ -0.3
TSPAN3-206ENST00000559373 PKHD1L1Q86WI1 4243 aa13.16□□□□□ -0.3
TSPAN3-206ENST00000559373 hDV102S1A0JD36 115 aa13.16□□□□□ -0.3
TSPAN3-206ENST00000559373 TEX46H3BTG2 121 aa13.16□□□□□ -0.3
TSPAN3-206ENST00000559373 DPH3P1Q9H4G8 78 aa13.16□□□□□ -0.3
TSPAN3-206ENST00000559373 TRAV26-2A0A0B4J265 109 aa13.15□□□□□ -0.3
TSPAN3-206ENST00000559373 XKRY2A2RUG3 117 aa13.15□□□□□ -0.3
TSPAN3-206ENST00000559373 F2Z2F3 143 aa13.15□□□□□ -0.3
TSPAN3-206ENST00000559373 PDE6DO43924 150 aa13.15□□□□□ -0.3
TSPAN3-206ENST00000559373 TRGC1P0CF51 173 aa13.15□□□□□ -0.3
TSPAN3-206ENST00000559373 BCL2P10415 239 aa13.15□□□□□ -0.3
TSPAN3-206ENST00000559373 RNASE7Q9H1E1 156 aaKnown RBP13.15□□□□□ -0.3
TSPAN3-206ENST00000559373 NIT2Q9NQR4 276 aa13.15□□□□□ -0.3
TSPAN3-206ENST00000559373 IGKV3OR2-268A0A0C4DH90 116 aa13.14□□□□□ -0.31
TSPAN3-206ENST00000559373 TWIST1Q15672 202 aa13.14□□□□□ -0.31
TSPAN3-206ENST00000559373 EIF5AL1Q6IS14 154 aaKnown RBP13.14□□□□□ -0.31
TSPAN3-206ENST00000559373 SDIM1Q6ZPB5 146 aa13.14□□□□□ -0.31
TSPAN3-206ENST00000559373 FAT3Q8TDW7 4589 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms