RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 CHCHD7Q9BUK0 85 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 TM2D2Q9BX73 214 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 RNASE7Q9H1E1 156 aaKnown RBP2.97□□□□□ -1.93
SNX1-205ENST00000559339 SMDT1Q9H4I9 107 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 RPP21Q9H633 154 aaKnown RBP2.97□□□□□ -1.93
SNX1-205ENST00000559339 DAZ3Q9NR90 486 aaKnown RBP2.97□□□□□ -1.93
SNX1-205ENST00000559339 TNFRSF18Q9Y5U5 241 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 COX11Q9Y6N1 276 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 FRAS1Q86XX4 4008 aa2.97□□□□□ -1.93
SNX1-205ENST00000559339 TRBV6-8A0A0A6YYG3 113 aa2.96□□□□□ -1.94
SNX1-205ENST00000559339 A8MWL6 223 aa2.96□□□□□ -1.94
SNX1-205ENST00000559339 IBA57-AS1B1ANH7 110 aa2.96□□□□□ -1.94
SNX1-205ENST00000559339 TMEM262E9PQX1 116 aa2.96□□□□□ -1.94
SNX1-205ENST00000559339 K7EN84 100 aa2.96□□□□□ -1.94
SNX1-205ENST00000559339 GATCO43716 136 aaKnown RBP2.96□□□□□ -1.94
SNX1-205ENST00000559339 IGLC6P0CF74 106 aa2.96□□□□□ -1.94
SNX1-205ENST00000559339 LINC00694P0DN24 101 aa2.96□□□□□ -1.94
SNX1-205ENST00000559339 UBE2D3P61077 147 aa2.96□□□□□ -1.94
SNX1-205ENST00000559339 RAB14P61106 215 aa2.96□□□□□ -1.94
SNX1-205ENST00000559339 UBE2D2P62837 147 aa2.96□□□□□ -1.94
SNX1-205ENST00000559339 TMEM241Q24JQ0 296 aa2.96□□□□□ -1.94
SNX1-205ENST00000559339 CT83Q5H943 113 aa2.96□□□□□ -1.94
SNX1-205ENST00000559339 FAM231DQ6ZW35 169 aa2.96□□□□□ -1.94
SNX1-205ENST00000559339 SPATA12Q7Z6I5 190 aa2.96□□□□□ -1.94
SNX1-205ENST00000559339 C15orf54Q8N8G6 183 aa2.96□□□□□ -1.94
SNX1-205ENST00000559339 RMI2Q96E14 147 aa2.96□□□□□ -1.94
SNX1-205ENST00000559339 DNAJC30Q96LL9 226 aa2.96□□□□□ -1.94
SNX1-205ENST00000559339 CNFNQ9BYD5 112 aa2.96□□□□□ -1.94
SNX1-205ENST00000559339 DPH3P1Q9H4G8 78 aa2.96□□□□□ -1.94
SNX1-205ENST00000559339 Q9HAA7 133 aa2.96□□□□□ -1.94
SNX1-205ENST00000559339 TRBV25-1A0A075B6N4 114 aa2.95□□□□□ -1.94
SNX1-205ENST00000559339 A0A087WTM6 91 aa2.95□□□□□ -1.94
SNX1-205ENST00000559339 FAM231BA6NCW3 169 aa2.95□□□□□ -1.94
SNX1-205ENST00000559339 M0QY20 66 aa2.95□□□□□ -1.94
SNX1-205ENST00000559339 CRPP02741 224 aa2.95□□□□□ -1.94
SNX1-205ENST00000559339 CTRLP40313 264 aa2.95□□□□□ -1.94
SNX1-205ENST00000559339 Q0VG73 95 aa2.95□□□□□ -1.94
SNX1-205ENST00000559339 RASL11AQ6T310 242 aa2.95□□□□□ -1.94
SNX1-205ENST00000559339 Q6ZRN7 208 aaPredicted RBP2.95□□□□□ -1.94
SNX1-205ENST00000559339 LINC01551Q86U37 167 aa2.95□□□□□ -1.94
SNX1-205ENST00000559339 NIT1Q86X76 327 aa2.95□□□□□ -1.94
SNX1-205ENST00000559339 NEXN-AS1Q8NBZ9 246 aa2.95□□□□□ -1.94
SNX1-205ENST00000559339 FRZBQ92765 325 aa2.95□□□□□ -1.94
SNX1-205ENST00000559339 CHCHD5Q9BSY4 110 aa2.95□□□□□ -1.94
SNX1-205ENST00000559339 GFRA4Q9GZZ7 299 aa2.95□□□□□ -1.94
SNX1-205ENST00000559339 NIT2Q9NQR4 276 aa2.95□□□□□ -1.94
SNX1-205ENST00000559339 Q9UF83 564 aa2.95□□□□□ -1.94
SNX1-205ENST00000559339 KIF25-AS1Q9Y6Z4 181 aa2.95□□□□□ -1.94
SNX1-205ENST00000559339 IGHV1-24A0A0C4DH33 117 aa2.94□□□□□ -1.94
SNX1-205ENST00000559339 HIGD1CA8MV81 97 aa2.94□□□□□ -1.94
SNX1-205ENST00000559339 UBE2L6O14933 153 aa2.94□□□□□ -1.94
SNX1-205ENST00000559339 ANGP03950 147 aaKnown RBP2.94□□□□□ -1.94
SNX1-205ENST00000559339 SRP19P09132 144 aaKnown RBP2.94□□□□□ -1.94
SNX1-205ENST00000559339 FOXA3P55318 350 aaPredicted RBP2.94□□□□□ -1.94
SNX1-205ENST00000559339 ADIRFQ15847 76 aa2.94□□□□□ -1.94
SNX1-205ENST00000559339 SUMO4Q6EEV6 95 aa2.94□□□□□ -1.94
SNX1-205ENST00000559339 TSKUQ8WUA8 353 aa2.94□□□□□ -1.94
SNX1-205ENST00000559339 GTSF1Q8WW33 167 aa2.94□□□□□ -1.94
SNX1-205ENST00000559339 UBE2WQ96B02 151 aa2.94□□□□□ -1.94
SNX1-205ENST00000559339 PGLYRP4Q96LB8 373 aa2.94□□□□□ -1.94
SNX1-205ENST00000559339 OSTCQ9NRP0 149 aa2.94□□□□□ -1.94
SNX1-205ENST00000559339 NAT8Q9UHE5 227 aa2.94□□□□□ -1.94
SNX1-205ENST00000559339 NAT8BQ9UHF3 227 aa2.94□□□□□ -1.94
SNX1-205ENST00000559339 KLK12Q9UKR0 248 aa2.94□□□□□ -1.94
SNX1-205ENST00000559339 VPS13DQ5THJ4 4388 aa2.93□□□□□ -1.94
SNX1-205ENST00000559339 EPPK1P58107 5090 aaKnown RBP2.93□□□□□ -1.94
SNX1-205ENST00000559339 IGKV2D-24A0A075B6R9 120 aa2.93□□□□□ -1.94
SNX1-205ENST00000559339 IGLV5-52A0A0A0MRZ9 124 aa2.93□□□□□ -1.94
SNX1-205ENST00000559339 A0A1B0GUT8 65 aa2.93□□□□□ -1.94
SNX1-205ENST00000559339 H3BS24 57 aa2.93□□□□□ -1.94
SNX1-205ENST00000559339 CDK2AP2O75956 126 aa2.93□□□□□ -1.94
SNX1-205ENST00000559339 PPP1R17O96001 155 aa2.93□□□□□ -1.94
SNX1-205ENST00000559339 KRTAP10-2P60368 255 aa2.93□□□□□ -1.94
SNX1-205ENST00000559339 RIGQ13278 110 aa2.93□□□□□ -1.94
SNX1-205ENST00000559339 COTL1Q14019 142 aa2.93□□□□□ -1.94
SNX1-205ENST00000559339 IQCJQ1A5X6 159 aa2.93□□□□□ -1.94
SNX1-205ENST00000559339 Q8N814 137 aa2.93□□□□□ -1.94
SNX1-205ENST00000559339 NTN5Q8WTR8 489 aaPredicted RBP2.93□□□□□ -1.94
SNX1-205ENST00000559339 ISOC2Q96AB3 205 aa2.93□□□□□ -1.94
SNX1-205ENST00000559339 TMEM243Q9BU79 118 aa2.93□□□□□ -1.94
SNX1-205ENST00000559339 C1orf43Q9BWL3 253 aa2.93□□□□□ -1.94
SNX1-205ENST00000559339 TRAV26-2A0A0B4J265 109 aa2.92□□□□□ -1.94
SNX1-205ENST00000559339 A0A1B0GUV1 79 aa2.92□□□□□ -1.94
SNX1-205ENST00000559339 A0A1B0GW15 77 aa2.92□□□□□ -1.94
SNX1-205ENST00000559339 LRCOL1A6NCL2 159 aa2.92□□□□□ -1.94
SNX1-205ENST00000559339 NCR2O95944 276 aa2.92□□□□□ -1.94
SNX1-205ENST00000559339 S100A8P05109 93 aa2.92□□□□□ -1.94
SNX1-205ENST00000559339 GCSHP23434 173 aa2.92□□□□□ -1.94
SNX1-205ENST00000559339 AMTP48728 403 aa2.92□□□□□ -1.94
SNX1-205ENST00000559339 RPL23P62829 140 aaKnown RBP2.92□□□□□ -1.94
SNX1-205ENST00000559339 PNRC1Q12796 327 aaPredicted RBP2.92□□□□□ -1.94
SNX1-205ENST00000559339 GAGE6Q13070 117 aa2.92□□□□□ -1.94
SNX1-205ENST00000559339 MIAQ16674 131 aa2.92□□□□□ -1.94
SNX1-205ENST00000559339 C14orf177Q52M58 125 aa2.92□□□□□ -1.94
SNX1-205ENST00000559339 MPV17L2Q567V2 206 aa2.92□□□□□ -1.94
SNX1-205ENST00000559339 AMMECR1LQ6DCA0 310 aa2.92□□□□□ -1.94
SNX1-205ENST00000559339 NTM-AS1Q6ZSK4 140 aa2.92□□□□□ -1.94
SNX1-205ENST00000559339 Q8N3U1 123 aa2.92□□□□□ -1.94
SNX1-205ENST00000559339 Q8N976 141 aa2.92□□□□□ -1.94
SNX1-205ENST00000559339 GATD1Q8NB37 220 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms