RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 WDR73Q6P4I2 378 aa12.66□□□□□ -0.38
CASC4-209ENST00000559222 TSKUQ8WUA8 353 aa12.66□□□□□ -0.38
CASC4-209ENST00000559222 RPL36ALQ969Q0 106 aaKnown RBP12.66□□□□□ -0.38
CASC4-209ENST00000559222 HIGD1CA8MV81 97 aa12.65□□□□□ -0.38
CASC4-209ENST00000559222 M0QY20 66 aa12.65□□□□□ -0.38
CASC4-209ENST00000559222 IGHV3-30P01768 117 aa12.65□□□□□ -0.38
CASC4-209ENST00000559222 IGHV3-33P01772 117 aa12.65□□□□□ -0.38
CASC4-209ENST00000559222 TRGC1P0CF51 173 aa12.65□□□□□ -0.38
CASC4-209ENST00000559222 IGHV3-30-3P0DP02 117 aa12.65□□□□□ -0.38
CASC4-209ENST00000559222 IGHV3-30-5P0DP03 117 aa12.65□□□□□ -0.38
CASC4-209ENST00000559222 Q6ZRN7 208 aaPredicted RBP12.65□□□□□ -0.38
CASC4-209ENST00000559222 DPH3P1Q9H4G8 78 aa12.65□□□□□ -0.38
CASC4-209ENST00000559222 PCLOQ9Y6V0 5065 aa12.65□□□□□ -0.38
CASC4-209ENST00000559222 TRAV8-6A0A0B4J262 113 aa12.64□□□□□ -0.39
CASC4-209ENST00000559222 TRAV26-2A0A0B4J265 109 aa12.63□□□□□ -0.39
CASC4-209ENST00000559222 LINC01556Q5JQF7 62 aa12.63□□□□□ -0.39
CASC4-209ENST00000559222 C15orf54Q8N8G6 183 aa12.63□□□□□ -0.39
CASC4-209ENST00000559222 DYNC1H1Q14204 4646 aaKnown RBP12.62□□□□□ -0.39
CASC4-209ENST00000559222 GFRA4Q9GZZ7 299 aa12.62□□□□□ -0.39
CASC4-209ENST00000559222 GATD1Q8NB37 220 aa12.61□□□□□ -0.39
CASC4-209ENST00000559222 NUP35Q8NFH5 326 aa12.61□□□□□ -0.39
CASC4-209ENST00000559222 DEFB104AQ8WTQ1 72 aa12.61□□□□□ -0.39
CASC4-209ENST00000559222 GAS8-AS1O95177 125 aa12.6□□□□□ -0.39
CASC4-209ENST00000559222 NTM-AS1Q6ZSK4 140 aa12.6□□□□□ -0.39
CASC4-209ENST00000559222 PKHD1P08F94 4074 aa12.6□□□□□ -0.39
CASC4-209ENST00000559222 RYR1P21817 5038 aa12.59□□□□□ -0.39
CASC4-209ENST00000559222 RASL11AQ6T310 242 aa12.59□□□□□ -0.39
CASC4-209ENST00000559222 DAZ4Q86SG3 579 aaKnown RBP12.59□□□□□ -0.39
CASC4-209ENST00000559222 RPL39LQ96EH5 51 aaKnown RBP12.59□□□□□ -0.39
CASC4-209ENST00000559222 DAZ3Q9NR90 486 aaKnown RBP12.59□□□□□ -0.39
CASC4-209ENST00000559222 A0A087WWC5 75 aa12.58□□□□□ -0.4
CASC4-209ENST00000559222 A0A1B0GUT8 65 aa12.58□□□□□ -0.4
CASC4-209ENST00000559222 FAM231BA6NCW3 169 aa12.58□□□□□ -0.4
CASC4-209ENST00000559222 ADCYAP1P18509 176 aa12.58□□□□□ -0.4
CASC4-209ENST00000559222 TRBV6-8A0A0A6YYG3 113 aa12.57□□□□□ -0.4
CASC4-209ENST00000559222 SMIM27A0A1W2PRY6 76 aa12.57□□□□□ -0.4
CASC4-209ENST00000559222 NIT1Q86X76 327 aa12.57□□□□□ -0.4
CASC4-209ENST00000559222 RNF185Q96GF1 192 aa12.57□□□□□ -0.4
CASC4-209ENST00000559222 DNAJC30Q96LL9 226 aa12.57□□□□□ -0.4
CASC4-209ENST00000559222 TRAV9-2A0A087WT02 112 aa12.56□□□□□ -0.4
CASC4-209ENST00000559222 IBA57-AS1B1ANH7 110 aa12.56□□□□□ -0.4
CASC4-209ENST00000559222 H7C1H1 209 aa12.56□□□□□ -0.4
CASC4-209ENST00000559222 BORCS7Q96B45 105 aa12.56□□□□□ -0.4
CASC4-209ENST00000559222 Q9HAA7 133 aa12.56□□□□□ -0.4
CASC4-209ENST00000559222 AMN1Q8IY45 258 aa12.55□□□□□ -0.4
CASC4-209ENST00000559222 NIT2Q9NQR4 276 aa12.55□□□□□ -0.4
CASC4-209ENST00000559222 NAT8BQ9UHF3 227 aa12.55□□□□□ -0.4
CASC4-209ENST00000559222 BTF3P20290 206 aaKnown RBP12.54□□□□□ -0.4
CASC4-209ENST00000559222 SMIM15Q7Z3B0 74 aa12.54□□□□□ -0.4
CASC4-209ENST00000559222 COMMD7Q86VX2 200 aa12.54□□□□□ -0.4
CASC4-209ENST00000559222 C10orf126Q8N4M7 172 aa12.54□□□□□ -0.4
CASC4-209ENST00000559222 TMEM191AQ9H0A3 160 aa12.54□□□□□ -0.4
CASC4-209ENST00000559222 FUSP35637 526 aaKnown RBP eCLIP12.53□□□□□ -0.4
CASC4-209ENST00000559222 SMKR1H3BMG3 65 aa12.52□□□□□ -0.41
CASC4-209ENST00000559222 K7EP13 123 aa12.52□□□□□ -0.41
CASC4-209ENST00000559222 RPS10P46783 165 aaKnown RBP12.52□□□□□ -0.41
CASC4-209ENST00000559222 RIGQ13278 110 aa12.52□□□□□ -0.41
CASC4-209ENST00000559222 MPV17L2Q567V2 206 aa12.52□□□□□ -0.41
CASC4-209ENST00000559222 TMEM218A2RU14 115 aa12.51□□□□□ -0.41
CASC4-209ENST00000559222 NCR2O95944 276 aa12.51□□□□□ -0.41
CASC4-209ENST00000559222 RAB4AP20338 218 aa12.51□□□□□ -0.41
CASC4-209ENST00000559222 KRTAP10-2P60368 255 aa12.51□□□□□ -0.41
CASC4-209ENST00000559222 GAGE6Q13070 117 aa12.51□□□□□ -0.41
CASC4-209ENST00000559222 MRPL54Q6P161 138 aaKnown RBP12.51□□□□□ -0.41
CASC4-209ENST00000559222 CHCHD5Q9BSY4 110 aa12.51□□□□□ -0.41
CASC4-209ENST00000559222 KLK12Q9UKR0 248 aa12.51□□□□□ -0.41
CASC4-209ENST00000559222 CAMPP49913 170 aa12.5□□□□□ -0.41
CASC4-209ENST00000559222 UQCC3Q6UW78 93 aa12.5□□□□□ -0.41
CASC4-209ENST00000559222 NFE4Q86UQ8 179 aa12.5□□□□□ -0.41
CASC4-209ENST00000559222 DNAH5Q8TE73 4624 aa12.5□□□□□ -0.41
CASC4-209ENST00000559222 A0A1B0GXF2 115 aa12.49□□□□□ -0.41
CASC4-209ENST00000559222 TMEM262E9PQX1 116 aa12.49□□□□□ -0.41
CASC4-209ENST00000559222 PNRC1Q12796 327 aaPredicted RBP12.49□□□□□ -0.41
CASC4-209ENST00000559222 IQCJQ1A5X6 159 aa12.49□□□□□ -0.41
CASC4-209ENST00000559222 Q8N976 141 aa12.49□□□□□ -0.41
CASC4-209ENST00000559222 TRBV25-1A0A075B6N4 114 aa12.48□□□□□ -0.41
CASC4-209ENST00000559222 A0A087WX48 190 aa12.48□□□□□ -0.41
CASC4-209ENST00000559222 IGHV1-24A0A0C4DH33 117 aa12.48□□□□□ -0.41
CASC4-209ENST00000559222 LINC00862A6NCI5 91 aa12.48□□□□□ -0.41
CASC4-209ENST00000559222 LAGE3Q14657 143 aa12.48□□□□□ -0.41
CASC4-209ENST00000559222 ATRAIDQ6UW56 229 aa12.48□□□□□ -0.41
CASC4-209ENST00000559222 SPATA12Q7Z6I5 190 aa12.48□□□□□ -0.41
CASC4-209ENST00000559222 URGCP-MRPS24S4R325 110 aa12.48□□□□□ -0.41
CASC4-209ENST00000559222 A0A087WTM6 91 aa12.47□□□□□ -0.41
CASC4-209ENST00000559222 SDHAF1A6NFY7 115 aa12.47□□□□□ -0.41
CASC4-209ENST00000559222 F8W036 122 aa12.47□□□□□ -0.41
CASC4-209ENST00000559222 TMEM97Q5BJF2 176 aa12.47□□□□□ -0.41
CASC4-209ENST00000559222 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.47□□□□□ -0.41
CASC4-209ENST00000559222 PPP1R2P9O14990 202 aa12.46□□□□□ -0.41
CASC4-209ENST00000559222 RBX1P62877 108 aa12.46□□□□□ -0.41
CASC4-209ENST00000559222 WFDC2Q14508 124 aa12.46□□□□□ -0.41
CASC4-209ENST00000559222 MRPL51Q4U2R6 128 aaKnown RBP12.46□□□□□ -0.41
CASC4-209ENST00000559222 FRZBQ92765 325 aa12.46□□□□□ -0.41
CASC4-209ENST00000559222 TRBV6-5A0A0K0K1A5 114 aa12.45□□□□□ -0.42
CASC4-209ENST00000559222 LRCOL1A6NCL2 159 aa12.45□□□□□ -0.42
CASC4-209ENST00000559222 FAM104BQ5XKR9 115 aa12.45□□□□□ -0.42
CASC4-209ENST00000559222 CLPSL2Q6UWE3 100 aa12.45□□□□□ -0.42
CASC4-209ENST00000559222 ENHOQ6UWT2 76 aa12.45□□□□□ -0.42
CASC4-209ENST00000559222 MAPKAPK5-AS1Q8N8E1 139 aa12.45□□□□□ -0.42
CASC4-209ENST00000559222 NRACQ8N912 160 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms