RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 ZDBF2Q9HCK1 2354 aa0.64□□□□□ -2.31
GABPB1-209ENST00000559100 CORTO00230 105 aa0.64□□□□□ -2.31
GABPB1-209ENST00000559100 GNG4P50150 75 aa0.64□□□□□ -2.31
GABPB1-209ENST00000559100 PPP3R1P63098 170 aa0.64□□□□□ -2.31
GABPB1-209ENST00000559100 C8orf59Q8N0T1 100 aaPredicted RBP0.64□□□□□ -2.31
GABPB1-209ENST00000559100 TTC9CQ8N5M4 171 aa0.64□□□□□ -2.31
GABPB1-209ENST00000559100 Q8N8P6 123 aa0.64□□□□□ -2.31
GABPB1-209ENST00000559100 SCP2D1Q9UJQ7 156 aa0.64□□□□□ -2.31
GABPB1-209ENST00000559100 IFT140Q96RY7 1462 aa0.64□□□□□ -2.31
GABPB1-209ENST00000559100 RBBP6Q7Z6E9 1792 aaKnown RBP0.64□□□□□ -2.31
GABPB1-209ENST00000559100 MYH7P12883 1935 aa0.64□□□□□ -2.31
GABPB1-209ENST00000559100 ASH1LQ9NR48 2969 aaKnown RBP0.63□□□□□ -2.31
GABPB1-209ENST00000559100 ZNF142P52746 1687 aaPredicted RBP0.63□□□□□ -2.31
GABPB1-209ENST00000559100 A0A087WTM6 91 aa0.63□□□□□ -2.31
GABPB1-209ENST00000559100 C20orf202A1L168 122 aa0.63□□□□□ -2.31
GABPB1-209ENST00000559100 SIX6O95475 246 aa0.63□□□□□ -2.31
GABPB1-209ENST00000559100 PPP1R17O96001 155 aa0.63□□□□□ -2.31
GABPB1-209ENST00000559100 TNFP01375 233 aa0.63□□□□□ -2.31
GABPB1-209ENST00000559100 S100PP25815 95 aa0.63□□□□□ -2.31
GABPB1-209ENST00000559100 GTF2H5Q6ZYL4 71 aa0.63□□□□□ -2.31
GABPB1-209ENST00000559100 PRR15LQ9BU68 103 aa0.63□□□□□ -2.31
GABPB1-209ENST00000559100 SPANXDQ9BXN6 97 aa0.63□□□□□ -2.31
GABPB1-209ENST00000559100 BPESC1Q9GZL8 116 aa0.63□□□□□ -2.31
GABPB1-209ENST00000559100 FBN3Q75N90 2809 aa0.63□□□□□ -2.31
GABPB1-209ENST00000559100 MYH9P35579 1960 aaKnown RBP0.63□□□□□ -2.31
GABPB1-209ENST00000559100 MUC22E2RYF6 1773 aaPredicted RBP0.62□□□□□ -2.31
GABPB1-209ENST00000559100 AKAP11Q9UKA4 1901 aa0.62□□□□□ -2.31
GABPB1-209ENST00000559100 ABCA4P78363 2273 aa0.62□□□□□ -2.31
GABPB1-209ENST00000559100 TRGV1A0A0A0MS02 117 aa0.62□□□□□ -2.31
GABPB1-209ENST00000559100 FAM24AA6NFZ4 105 aa0.62□□□□□ -2.31
GABPB1-209ENST00000559100 OOSP1A8MZH6 123 aa0.62□□□□□ -2.31
GABPB1-209ENST00000559100 PRB3Q04118 309 aaPredicted RBP0.62□□□□□ -2.31
GABPB1-209ENST00000559100 SMIM11BQ8TCY0 68 aa0.62□□□□□ -2.31
GABPB1-209ENST00000559100 LOC285556D6RIA3 1793 aa0.62□□□□□ -2.31
GABPB1-209ENST00000559100 TENM1Q9UKZ4 2725 aa0.62□□□□□ -2.31
GABPB1-209ENST00000559100 CASKIN1Q8WXD9 1431 aa0.62□□□□□ -2.31
GABPB1-209ENST00000559100 NCOA3Q9Y6Q9 1424 aa0.62□□□□□ -2.31
GABPB1-209ENST00000559100 EIF4G3O43432 1585 aaKnown RBP0.62□□□□□ -2.31
GABPB1-209ENST00000559100 FOCADQ5VW36 1801 aa0.61□□□□□ -2.31
GABPB1-209ENST00000559100 NRXN2Q9P2S2 1712 aa0.61□□□□□ -2.31
GABPB1-209ENST00000559100 ESPL1Q14674 2120 aa0.61□□□□□ -2.31
GABPB1-209ENST00000559100 A0A096LNT2 108 aa0.61□□□□□ -2.31
GABPB1-209ENST00000559100 TRAV1-2A0A0B4J238 106 aa0.61□□□□□ -2.31
GABPB1-209ENST00000559100 A0A0D9SG42 100 aa0.61□□□□□ -2.31
GABPB1-209ENST00000559100 SSSCA1O60232 199 aa0.61□□□□□ -2.31
GABPB1-209ENST00000559100 GCHFRP30047 84 aa0.61□□□□□ -2.31
GABPB1-209ENST00000559100 SPINK7P58062 85 aa0.61□□□□□ -2.31
GABPB1-209ENST00000559100 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.61□□□□□ -2.31
GABPB1-209ENST00000559100 C5orf38Q86SI9 138 aa0.61□□□□□ -2.31
GABPB1-209ENST00000559100 MYOZ3Q8TDC0 251 aa0.61□□□□□ -2.31
GABPB1-209ENST00000559100 TCEAL7Q9BRU2 100 aa0.61□□□□□ -2.31
GABPB1-209ENST00000559100 IER3IP1Q9Y5U9 82 aa0.61□□□□□ -2.31
GABPB1-209ENST00000559100 NALCNQ8IZF0 1738 aa0.61□□□□□ -2.31
GABPB1-209ENST00000559100 AHNAKQ09666 5890 aaKnown RBP0.61□□□□□ -2.31
GABPB1-209ENST00000559100 A2ML1A8K2U0 1454 aa0.61□□□□□ -2.31
GABPB1-209ENST00000559100 MYOM2P54296 1465 aa0.61□□□□□ -2.31
GABPB1-209ENST00000559100 KDM6BO15054 1643 aa0.6□□□□□ -2.31
GABPB1-209ENST00000559100 LAMB1P07942 1786 aa0.6□□□□□ -2.31
GABPB1-209ENST00000559100 UBE2L5PA0A1B0GUS4 154 aa0.6□□□□□ -2.31
GABPB1-209ENST00000559100 CLPSL1A2RUU4 121 aa0.6□□□□□ -2.31
GABPB1-209ENST00000559100 TMEM14DPA8MWL7 114 aa0.6□□□□□ -2.31
GABPB1-209ENST00000559100 IFITM1P13164 125 aa0.6□□□□□ -2.31
GABPB1-209ENST00000559100 UBE2L3P68036 154 aaKnown RBP0.6□□□□□ -2.31
GABPB1-209ENST00000559100 SPAG11BQ08648 103 aa0.6□□□□□ -2.31
GABPB1-209ENST00000559100 SPAG11AQ6PDA7 123 aa0.6□□□□□ -2.31
GABPB1-209ENST00000559100 SPATA8Q6RVD6 105 aa0.6□□□□□ -2.31
GABPB1-209ENST00000559100 BAGE3Q86Y29 109 aa0.6□□□□□ -2.31
GABPB1-209ENST00000559100 Q96NJ1 140 aa0.6□□□□□ -2.31
GABPB1-209ENST00000559100 NPVFQ9HCQ7 196 aa0.6□□□□□ -2.31
GABPB1-209ENST00000559100 R4GMQ9 66 aa0.6□□□□□ -2.31
GABPB1-209ENST00000559100 CPSF1Q10570 1443 aaKnown RBP0.6□□□□□ -2.31
GABPB1-209ENST00000559100 ARAP2Q8WZ64 1704 aa0.6□□□□□ -2.31
GABPB1-209ENST00000559100 NWD2Q9ULI1 1742 aa0.6□□□□□ -2.31
GABPB1-209ENST00000559100 KNTC1P50748 2209 aa0.6□□□□□ -2.31
GABPB1-209ENST00000559100 KIAA0100Q14667 2235 aaKnown RBP0.6□□□□□ -2.31
GABPB1-209ENST00000559100 PHIPQ8WWQ0 1821 aa0.59□□□□□ -2.31
GABPB1-209ENST00000559100 PPIP5K1Q6PFW1 1433 aa0.59□□□□□ -2.31
GABPB1-209ENST00000559100 GVQW2A0A096LPI5 108 aaPredicted RBP0.59□□□□□ -2.31
GABPB1-209ENST00000559100 CTXND1A0A1B0GTU2 59 aa0.59□□□□□ -2.31
GABPB1-209ENST00000559100 GNG11P61952 73 aa0.59□□□□□ -2.31
GABPB1-209ENST00000559100 Q6ZRX8 168 aa0.59□□□□□ -2.31
GABPB1-209ENST00000559100 COMMD6Q7Z4G1 85 aa0.59□□□□□ -2.31
GABPB1-209ENST00000559100 VMO1Q7Z5L0 202 aa0.59□□□□□ -2.31
GABPB1-209ENST00000559100 TSLPQ969D9 159 aa0.59□□□□□ -2.31
GABPB1-209ENST00000559100 C12orf57Q99622 126 aa0.59□□□□□ -2.31
GABPB1-209ENST00000559100 CGREF1Q99674 301 aa0.59□□□□□ -2.31
GABPB1-209ENST00000559100 WFDC6Q9BQY6 131 aa0.59□□□□□ -2.31
GABPB1-209ENST00000559100 CYP4F30PQ9H0H9 118 aa0.59□□□□□ -2.31
GABPB1-209ENST00000559100 V9GYH0 126 aa0.59□□□□□ -2.31
GABPB1-209ENST00000559100 ABCA1O95477 2261 aa0.59□□□□□ -2.32
GABPB1-209ENST00000559100 PARP14Q460N5 1801 aa0.59□□□□□ -2.32
GABPB1-209ENST00000559100 PEG3Q9GZU2 1588 aa0.58□□□□□ -2.32
GABPB1-209ENST00000559100 TRBV7-3A0A075B6L6 115 aa0.58□□□□□ -2.32
GABPB1-209ENST00000559100 SPINK8P0C7L1 97 aa0.58□□□□□ -2.32
GABPB1-209ENST00000559100 SNCAP37840 140 aa0.58□□□□□ -2.32
GABPB1-209ENST00000559100 ATP5EP56381 51 aaPredicted RBP0.58□□□□□ -2.32
GABPB1-209ENST00000559100 DCDP81605 110 aaKnown RBP0.58□□□□□ -2.32
GABPB1-209ENST00000559100 CFAP126Q5VTH2 177 aa0.58□□□□□ -2.32
GABPB1-209ENST00000559100 MGST2Q99735 147 aa0.58□□□□□ -2.32
GABPB1-209ENST00000559100 FAM103A1Q9BTL3 118 aaKnown RBP0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms