RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 DAZ4Q86SG3 579 aaKnown RBP4.88□□□□□ -1.63
SPG11-213ENST00000558988 Q8N814 137 aa4.88□□□□□ -1.63
SPG11-213ENST00000558988 STOML3Q8TAV4 291 aa4.88□□□□□ -1.63
SPG11-213ENST00000558988 DAZ3Q9NR90 486 aaKnown RBP4.88□□□□□ -1.63
SPG11-213ENST00000558988 PHLDA3Q9Y5J5 127 aa4.88□□□□□ -1.63
SPG11-213ENST00000558988 URGCP-MRPS24S4R325 110 aa4.88□□□□□ -1.63
SPG11-213ENST00000558988 MUC21A0A0G2JKD1 596 aa4.87□□□□□ -1.63
SPG11-213ENST00000558988 MUC21A0A140T8X8 626 aa4.87□□□□□ -1.63
SPG11-213ENST00000558988 LRCOL1A6NCL2 159 aa4.87□□□□□ -1.63
SPG11-213ENST00000558988 KRBOX1C9JBD0 128 aa4.87□□□□□ -1.63
SPG11-213ENST00000558988 CIDEAO60543 219 aa4.87□□□□□ -1.63
SPG11-213ENST00000558988 WFDC2Q14508 124 aa4.87□□□□□ -1.63
SPG11-213ENST00000558988 RGS21Q2M5E4 152 aa4.87□□□□□ -1.63
SPG11-213ENST00000558988 FAM213BQ8TBF2 198 aa4.87□□□□□ -1.63
SPG11-213ENST00000558988 HIST1H2BAQ96A08 127 aa4.87□□□□□ -1.63
SPG11-213ENST00000558988 IL36BQ9NZH7 164 aa4.87□□□□□ -1.63
SPG11-213ENST00000558988 G3V3Q6 166 aa4.86□□□□□ -1.63
SPG11-213ENST00000558988 RHODO00212 210 aa4.86□□□□□ -1.63
SPG11-213ENST00000558988 CRIP1P50238 77 aa4.86□□□□□ -1.63
SPG11-213ENST00000558988 RPL19P84098 196 aaKnown RBP4.86□□□□□ -1.63
SPG11-213ENST00000558988 ZNF56Q15929 161 aa4.86□□□□□ -1.63
SPG11-213ENST00000558988 LINC01620Q4KN68 170 aa4.86□□□□□ -1.63
SPG11-213ENST00000558988 PRR27Q6MZM9 219 aa4.86□□□□□ -1.63
SPG11-213ENST00000558988 ZFP2Q6ZN57 461 aa4.86□□□□□ -1.63
SPG11-213ENST00000558988 SFT2D1Q8WV19 159 aa4.86□□□□□ -1.63
SPG11-213ENST00000558988 BAALCQ8WXS3 180 aa4.86□□□□□ -1.63
SPG11-213ENST00000558988 PTH2Q96A98 100 aa4.86□□□□□ -1.63
SPG11-213ENST00000558988 FMC1Q96HJ9 113 aa4.86□□□□□ -1.63
SPG11-213ENST00000558988 DNAJC30Q96LL9 226 aa4.86□□□□□ -1.63
SPG11-213ENST00000558988 TM2D2Q9BX73 214 aa4.86□□□□□ -1.63
SPG11-213ENST00000558988 NKX6-2Q9C056 277 aaPredicted RBP4.86□□□□□ -1.63
SPG11-213ENST00000558988 KLK12Q9UKR0 248 aa4.86□□□□□ -1.63
SPG11-213ENST00000558988 ZFP30Q9Y2G7 519 aa4.86□□□□□ -1.63
SPG11-213ENST00000558988 PKHD1P08F94 4074 aa4.85□□□□□ -1.63
SPG11-213ENST00000558988 IGKV2D-24A0A075B6R9 120 aa4.85□□□□□ -1.63
SPG11-213ENST00000558988 A0A087WWC5 75 aa4.85□□□□□ -1.63
SPG11-213ENST00000558988 A0A087WX48 190 aa4.85□□□□□ -1.63
SPG11-213ENST00000558988 TRAV8-3A0A0A6YYJ7 113 aa4.85□□□□□ -1.63
SPG11-213ENST00000558988 IFITM10A6NMD0 228 aa4.85□□□□□ -1.63
SPG11-213ENST00000558988 LAGE3Q14657 143 aa4.85□□□□□ -1.63
SPG11-213ENST00000558988 KCNIP4Q6PIL6 250 aa4.85□□□□□ -1.63
SPG11-213ENST00000558988 ZFP82Q8N141 532 aa4.85□□□□□ -1.63
SPG11-213ENST00000558988 UBE2WQ96B02 151 aa4.85□□□□□ -1.63
SPG11-213ENST00000558988 ZNF471Q9BX82 626 aaPredicted RBP4.85□□□□□ -1.63
SPG11-213ENST00000558988 CYTL1Q9NRR1 136 aa4.85□□□□□ -1.63
SPG11-213ENST00000558988 DNAH2Q9P225 4427 aa4.84□□□□□ -1.63
SPG11-213ENST00000558988 FAT2Q9NYQ8 4349 aa4.84□□□□□ -1.63
SPG11-213ENST00000558988 A4D1N5 150 aa4.84□□□□□ -1.63
SPG11-213ENST00000558988 RBFOX3A6NFN3 312 aa4.84□□□□□ -1.63
SPG11-213ENST00000558988 TMEM262E9PQX1 116 aa4.84□□□□□ -1.63
SPG11-213ENST00000558988 PFDN1O60925 122 aa4.84□□□□□ -1.63
SPG11-213ENST00000558988 LTAP01374 205 aa4.84□□□□□ -1.63
SPG11-213ENST00000558988 LINC00694P0DN24 101 aa4.84□□□□□ -1.63
SPG11-213ENST00000558988 RPL36AP83881 106 aaKnown RBP4.84□□□□□ -1.63
SPG11-213ENST00000558988 UFSP1Q6NVU6 142 aa4.84□□□□□ -1.63
SPG11-213ENST00000558988 SFRP2Q96HF1 295 aa4.84□□□□□ -1.63
SPG11-213ENST00000558988 TMEM70Q9BUB7 260 aa4.84□□□□□ -1.63
SPG11-213ENST00000558988 TPPP3Q9BW30 176 aa4.84□□□□□ -1.63
SPG11-213ENST00000558988 DNAH17Q9UFH2 4485 aa4.83□□□□□ -1.64
SPG11-213ENST00000558988 KANTRA0A1W2PQU2 76 aa4.83□□□□□ -1.64
SPG11-213ENST00000558988 PIK3CD-AS1Q5SR53 167 aa4.83□□□□□ -1.64
SPG11-213ENST00000558988 SPANXN1Q5VSR9 72 aa4.83□□□□□ -1.64
SPG11-213ENST00000558988 NIT1Q86X76 327 aa4.83□□□□□ -1.64
SPG11-213ENST00000558988 BAGE2Q86Y30 109 aa4.83□□□□□ -1.64
SPG11-213ENST00000558988 OR10AG1Q8NH19 301 aa4.83□□□□□ -1.64
SPG11-213ENST00000558988 RMI2Q96E14 147 aa4.83□□□□□ -1.64
SPG11-213ENST00000558988 PKD1P98161 4303 aa4.83□□□□□ -1.64
SPG11-213ENST00000558988 FLG2Q5D862 2391 aaPredicted RBP4.82□□□□□ -1.64
SPG11-213ENST00000558988 BCL2L11O43521 198 aa4.82□□□□□ -1.64
SPG11-213ENST00000558988 HLA-DQA1P01909 254 aa4.82□□□□□ -1.64
SPG11-213ENST00000558988 CRPP02741 224 aa4.82□□□□□ -1.64
SPG11-213ENST00000558988 ANGP03950 147 aaKnown RBP4.82□□□□□ -1.64
SPG11-213ENST00000558988 MGPP08493 103 aa4.82□□□□□ -1.64
SPG11-213ENST00000558988 CLPSL2Q6UWE3 100 aa4.82□□□□□ -1.64
SPG11-213ENST00000558988 KCNRGQ8N5I3 272 aa4.82□□□□□ -1.64
SPG11-213ENST00000558988 C15orf54Q8N8G6 183 aa4.82□□□□□ -1.64
SPG11-213ENST00000558988 CHCHD5Q9BSY4 110 aa4.82□□□□□ -1.64
SPG11-213ENST00000558988 GNG13Q9P2W3 67 aa4.82□□□□□ -1.64
SPG11-213ENST00000558988 DNAH11Q96DT5 4516 aa4.82□□□□□ -1.64
SPG11-213ENST00000558988 TRBV7-3A0A075B6L6 115 aa4.81□□□□□ -1.64
SPG11-213ENST00000558988 TRBV6-1A0A0K0K1D8 114 aa4.81□□□□□ -1.64
SPG11-213ENST00000558988 PRYO14603 147 aa4.81□□□□□ -1.64
SPG11-213ENST00000558988 SEC11BP0C7V7 166 aa4.81□□□□□ -1.64
SPG11-213ENST00000558988 SMIM17P0DL12 118 aa4.81□□□□□ -1.64
SPG11-213ENST00000558988 GZMBP10144 247 aa4.81□□□□□ -1.64
SPG11-213ENST00000558988 UBE2D3P61077 147 aa4.81□□□□□ -1.64
SPG11-213ENST00000558988 UBE2D2P62837 147 aa4.81□□□□□ -1.64
SPG11-213ENST00000558988 DNLZQ5SXM8 178 aa4.81□□□□□ -1.64
SPG11-213ENST00000558988 TCEAL7Q9BRU2 100 aa4.81□□□□□ -1.64
SPG11-213ENST00000558988 DERL1Q9BUN8 251 aa4.81□□□□□ -1.64
SPG11-213ENST00000558988 RYR1P21817 5038 aa4.81□□□□□ -1.64
SPG11-213ENST00000558988 ABCA13Q86UQ4 5058 aa4.8□□□□□ -1.64
SPG11-213ENST00000558988 A0A0D9SG52 128 aa4.8□□□□□ -1.64
SPG11-213ENST00000558988 TRBV10-1A0A0K0K1A3 114 aa4.8□□□□□ -1.64
SPG11-213ENST00000558988 UMAD1C9J7I0 102 aa4.8□□□□□ -1.64
SPG11-213ENST00000558988 S100A9P06702 114 aaKnown RBP4.8□□□□□ -1.64
SPG11-213ENST00000558988 RPL35P42766 123 aaKnown RBP4.8□□□□□ -1.64
SPG11-213ENST00000558988 RAB4BP61018 213 aa4.8□□□□□ -1.64
SPG11-213ENST00000558988 CCL20P78556 96 aa4.8□□□□□ -1.64
SPG11-213ENST00000558988 ZNF345Q14585 488 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms