RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 SMCR5Q8TEV8 140 aa12.03□□□□□ -0.48
HMBOX1-212ENST00000558662 VSIG2Q96IQ7 327 aa12.03□□□□□ -0.48
HMBOX1-212ENST00000558662 NBEAQ8NFP9 2946 aa12.03□□□□□ -0.48
HMBOX1-212ENST00000558662 URB1O60287 2271 aaKnown RBP12.02□□□□□ -0.48
HMBOX1-212ENST00000558662 FAM223BA6NKX1 122 aa12.02□□□□□ -0.48
HMBOX1-212ENST00000558662 FAM223AQ8IWN6 122 aa12.02□□□□□ -0.48
HMBOX1-212ENST00000558662 MRAPQ8TCY5 172 aa12.02□□□□□ -0.48
HMBOX1-212ENST00000558662 OVOL2Q9BRP0 275 aa12.02□□□□□ -0.48
HMBOX1-212ENST00000558662 ARHGAP32A7KAX9 2087 aa12.02□□□□□ -0.48
HMBOX1-212ENST00000558662 CFAP54Q96N23 3096 aa12.02□□□□□ -0.49
HMBOX1-212ENST00000558662 IGF1P05019 195 aa12.02□□□□□ -0.49
HMBOX1-212ENST00000558662 RPL18AQ02543 176 aaKnown RBP12.02□□□□□ -0.49
HMBOX1-212ENST00000558662 PRB3Q04118 309 aaPredicted RBP12.02□□□□□ -0.49
HMBOX1-212ENST00000558662 GPR179Q6PRD1 2367 aa12.01□□□□□ -0.49
HMBOX1-212ENST00000558662 ADAMTSL4-AS1Q5T5F5 129 aa12.01□□□□□ -0.49
HMBOX1-212ENST00000558662 C9orf85Q96MD7 179 aa12.01□□□□□ -0.49
HMBOX1-212ENST00000558662 MUC4Q99102 2169 aa12□□□□□ -0.49
HMBOX1-212ENST00000558662 SERP2Q8N6R1 65 aa12□□□□□ -0.49
HMBOX1-212ENST00000558662 NDUFC2-KCTD14E9PQ53 114 aa12□□□□□ -0.49
HMBOX1-212ENST00000558662 NDUFA4O00483 81 aa12□□□□□ -0.49
HMBOX1-212ENST00000558662 DPH3Q96FX2 82 aa12□□□□□ -0.49
HMBOX1-212ENST00000558662 PRRC2AP48634 2157 aaKnown RBP11.99□□□□□ -0.49
HMBOX1-212ENST00000558662 NDUFA1O15239 70 aa11.99□□□□□ -0.49
HMBOX1-212ENST00000558662 PF4V1P10720 104 aa11.99□□□□□ -0.49
HMBOX1-212ENST00000558662 IGHV3-64A0A075B6Q5 118 aa11.98□□□□□ -0.49
HMBOX1-212ENST00000558662 DAZ2Q13117 558 aaKnown RBP11.98□□□□□ -0.49
HMBOX1-212ENST00000558662 ECSCRQ19T08 205 aa11.98□□□□□ -0.49
HMBOX1-212ENST00000558662 DAZ4Q86SG3 579 aaKnown RBP11.98□□□□□ -0.49
HMBOX1-212ENST00000558662 DAZ1Q9NQZ3 744 aaKnown RBP11.98□□□□□ -0.49
HMBOX1-212ENST00000558662 DAZ3Q9NR90 486 aaKnown RBP11.98□□□□□ -0.49
HMBOX1-212ENST00000558662 CD28P10747 220 aa11.97□□□□□ -0.49
HMBOX1-212ENST00000558662 Q6JHZ5 121 aa11.97□□□□□ -0.49
HMBOX1-212ENST00000558662 PRORYQ9H606 182 aa11.97□□□□□ -0.49
HMBOX1-212ENST00000558662 VPS13AQ96RL7 3174 aa11.97□□□□□ -0.49
HMBOX1-212ENST00000558662 IGHV3OR16-13A0A075B7E8 117 aa11.97□□□□□ -0.49
HMBOX1-212ENST00000558662 IGHV3-74A0A0B4J1X5 117 aa11.97□□□□□ -0.49
HMBOX1-212ENST00000558662 ATP6V0E1O15342 81 aa11.97□□□□□ -0.49
HMBOX1-212ENST00000558662 BAALC-AS2P0C853 105 aa11.97□□□□□ -0.49
HMBOX1-212ENST00000558662 BEAN1Q3B7T3 259 aa11.97□□□□□ -0.49
HMBOX1-212ENST00000558662 PF4P02776 101 aa11.96□□□□□ -0.49
HMBOX1-212ENST00000558662 RPL11P62913 178 aaKnown RBP11.96□□□□□ -0.49
HMBOX1-212ENST00000558662 IGF2-ASQ6U949 168 aa11.96□□□□□ -0.49
HMBOX1-212ENST00000558662 OPRPNQ99935 248 aaPredicted RBP11.96□□□□□ -0.49
HMBOX1-212ENST00000558662 A0A087WWL8 130 aa11.95□□□□□ -0.5
HMBOX1-212ENST00000558662 SPRY2O43597 315 aa11.95□□□□□ -0.5
HMBOX1-212ENST00000558662 CACNA1HO95180 2353 aa11.95□□□□□ -0.5
HMBOX1-212ENST00000558662 TIRAPP58753 221 aa11.95□□□□□ -0.5
HMBOX1-212ENST00000558662 DUX5Q96PT3 197 aa11.95□□□□□ -0.5
HMBOX1-212ENST00000558662 IGHV3-49A0A0A0MS15 119 aa11.94□□□□□ -0.5
HMBOX1-212ENST00000558662 hADV29S1A0JD25 119 aa11.94□□□□□ -0.5
HMBOX1-212ENST00000558662 NBL1P41271 181 aa11.94□□□□□ -0.5
HMBOX1-212ENST00000558662 KLK5Q9Y337 293 aaPredicted RBP11.94□□□□□ -0.5
HMBOX1-212ENST00000558662 IGLV5-45A0A087WSX0 123 aa11.93□□□□□ -0.5
HMBOX1-212ENST00000558662 IGHV3-16A0A0C4DH30 117 aa11.93□□□□□ -0.5
HMBOX1-212ENST00000558662 DEFB109BQ30KR1 87 aa11.93□□□□□ -0.5
HMBOX1-212ENST00000558662 JPT2Q9H910 190 aa11.93□□□□□ -0.5
HMBOX1-212ENST00000558662 WDFY3Q8IZQ1 3526 aa11.93□□□□□ -0.5
HMBOX1-212ENST00000558662 FRYLO94915 3013 aa11.93□□□□□ -0.5
HMBOX1-212ENST00000558662 OTOGLQ3ZCN5 2332 aa11.93□□□□□ -0.5
HMBOX1-212ENST00000558662 WDFY4Q6ZS81 3184 aa11.93□□□□□ -0.5
HMBOX1-212ENST00000558662 LINC00308Q8TCZ7 52 aa11.92□□□□□ -0.5
HMBOX1-212ENST00000558662 PIMREGQ9BSJ6 248 aa11.92□□□□□ -0.5
HMBOX1-212ENST00000558662 UPK3BQ9BT76 320 aa11.92□□□□□ -0.5
HMBOX1-212ENST00000558662 CUL9Q8IWT3 2517 aa11.92□□□□□ -0.5
HMBOX1-212ENST00000558662 ADARB2-AS1A8MUL3 147 aa11.91□□□□□ -0.5
HMBOX1-212ENST00000558662 H3BUA1 57 aa11.91□□□□□ -0.5
HMBOX1-212ENST00000558662 NDUFC2O95298 119 aa11.91□□□□□ -0.5
HMBOX1-212ENST00000558662 ZNF580Q9UK33 172 aa11.91□□□□□ -0.5
HMBOX1-212ENST00000558662 DMDP11532 3685 aa11.9□□□□□ -0.5
HMBOX1-212ENST00000558662 IGHV3OR16-10A0A075B7F0 116 aa11.9□□□□□ -0.5
HMBOX1-212ENST00000558662 FAM74A4Q5TZK3 123 aa11.9□□□□□ -0.5
HMBOX1-212ENST00000558662 TRAV41A0A0B4J266 112 aa11.9□□□□□ -0.51
HMBOX1-212ENST00000558662 DNAL4O96015 105 aa11.9□□□□□ -0.51
HMBOX1-212ENST00000558662 C19orf54Q5BKX5 351 aa11.9□□□□□ -0.51
HMBOX1-212ENST00000558662 USMG5Q96IX5 58 aa11.9□□□□□ -0.51
HMBOX1-212ENST00000558662 F5H768 121 aa11.89□□□□□ -0.51
HMBOX1-212ENST00000558662 LYNX1G3V0Z9 82 aa11.89□□□□□ -0.51
HMBOX1-212ENST00000558662 LYNX1P0DP58 116 aa11.89□□□□□ -0.51
HMBOX1-212ENST00000558662 MALP21145 153 aa11.89□□□□□ -0.51
HMBOX1-212ENST00000558662 PIK3CD-AS1Q5SR53 167 aa11.89□□□□□ -0.51
HMBOX1-212ENST00000558662 FAM104AQ969W3 186 aa11.89□□□□□ -0.51
HMBOX1-212ENST00000558662 PRIMA1Q86XR5 153 aa11.88□□□□□ -0.51
HMBOX1-212ENST00000558662 RNF152Q8N8N0 203 aa11.88□□□□□ -0.51
HMBOX1-212ENST00000558662 MYO15AQ9UKN7 3530 aa11.88□□□□□ -0.51
HMBOX1-212ENST00000558662 TRAV13-1A0A0B4J241 112 aa11.87□□□□□ -0.51
HMBOX1-212ENST00000558662 K7ENP7 123 aa11.87□□□□□ -0.51
HMBOX1-212ENST00000558662 S100A7L2Q5SY68 101 aa11.87□□□□□ -0.51
HMBOX1-212ENST00000558662 Q6ZSV7 163 aa11.87□□□□□ -0.51
HMBOX1-212ENST00000558662 TRAV13-2A0A0B4J235 113 aa11.87□□□□□ -0.51
HMBOX1-212ENST00000558662 UCNP55089 124 aa11.87□□□□□ -0.51
HMBOX1-212ENST00000558662 ATP5EP2Q5VTU8 51 aa11.87□□□□□ -0.51
HMBOX1-212ENST00000558662 OBSCN-AS1Q96MR7 158 aa11.87□□□□□ -0.51
HMBOX1-212ENST00000558662 C22orf24Q9Y442 160 aa11.87□□□□□ -0.51
HMBOX1-212ENST00000558662 IGLV5-39A0A0G2JS06 123 aa11.86□□□□□ -0.51
HMBOX1-212ENST00000558662 RPL28P46779 137 aaKnown RBP11.86□□□□□ -0.51
HMBOX1-212ENST00000558662 HIST2H2BCQ6DN03 193 aa11.86□□□□□ -0.51
HMBOX1-212ENST00000558662 HIST2H2BDQ6DRA6 164 aa11.86□□□□□ -0.51
HMBOX1-212ENST00000558662 KIR2DL5BQ8NHK3 375 aa11.86□□□□□ -0.51
HMBOX1-212ENST00000558662 IGHV1OR15-1A0A075B7D0 117 aa11.85□□□□□ -0.51
HMBOX1-212ENST00000558662 G3V318 75 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms