RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 RBFOX3A6NFN3 312 aa2.85□□□□□ -1.95
SPG11-211ENST00000558561 FABP5P3A8MUU1 101 aa2.85□□□□□ -1.95
SPG11-211ENST00000558561 H3BVH4 76 aa2.85□□□□□ -1.95
SPG11-211ENST00000558561 K7EQD1 137 aa2.85□□□□□ -1.95
SPG11-211ENST00000558561 M0R2P5 195 aa2.85□□□□□ -1.95
SPG11-211ENST00000558561 PFDN1O60925 122 aa2.85□□□□□ -1.95
SPG11-211ENST00000558561 CRYGDP07320 174 aa2.85□□□□□ -1.95
SPG11-211ENST00000558561 PFN1P07737 140 aaKnown RBP2.85□□□□□ -1.95
SPG11-211ENST00000558561 SULT1A2P50226 295 aa2.85□□□□□ -1.95
SPG11-211ENST00000558561 ZNF345Q14585 488 aa2.85□□□□□ -1.95
SPG11-211ENST00000558561 ZNF674Q2M3X9 581 aa2.85□□□□□ -1.95
SPG11-211ENST00000558561 UFSP1Q6NVU6 142 aa2.85□□□□□ -1.95
SPG11-211ENST00000558561 ALKAL2Q6UX46 152 aa2.85□□□□□ -1.95
SPG11-211ENST00000558561 Q86TA4 180 aa2.85□□□□□ -1.95
SPG11-211ENST00000558561 WFDC10BQ8IUB3 73 aa2.85□□□□□ -1.95
SPG11-211ENST00000558561 SLC25A29Q8N8R3 303 aa2.85□□□□□ -1.95
SPG11-211ENST00000558561 OR4C5Q8NGB2 326 aa2.85□□□□□ -1.95
SPG11-211ENST00000558561 FAM210BQ96KR6 192 aa2.85□□□□□ -1.95
SPG11-211ENST00000558561 C18orf15Q96N68 181 aa2.85□□□□□ -1.95
SPG11-211ENST00000558561 ATG101Q9BSB4 218 aa2.85□□□□□ -1.95
SPG11-211ENST00000558561 SPXQ9BT56 116 aa2.85□□□□□ -1.95
SPG11-211ENST00000558561 GNG13Q9P2W3 67 aa2.85□□□□□ -1.95
SPG11-211ENST00000558561 LENEPQ9Y5L5 61 aa2.85□□□□□ -1.95
SPG11-211ENST00000558561 LRP1BQ9NZR2 4599 aa2.85□□□□□ -1.95
SPG11-211ENST00000558561 KIAA1109Q2LD37 5005 aa2.84□□□□□ -1.95
SPG11-211ENST00000558561 PKHD1P08F94 4074 aa2.84□□□□□ -1.95
SPG11-211ENST00000558561 TRBV20OR9-2A0A075B6H5 130 aa2.84□□□□□ -1.95
SPG11-211ENST00000558561 TEX48A0A1B0GUV7 120 aa2.84□□□□□ -1.95
SPG11-211ENST00000558561 B4DEV8 164 aa2.84□□□□□ -1.95
SPG11-211ENST00000558561 C9JQL5 133 aa2.84□□□□□ -1.95
SPG11-211ENST00000558561 NXPH4O95158 308 aa2.84□□□□□ -1.95
SPG11-211ENST00000558561 LTAP01374 205 aa2.84□□□□□ -1.95
SPG11-211ENST00000558561 TPT1P13693 172 aaKnown RBP2.84□□□□□ -1.95
SPG11-211ENST00000558561 GATA1P15976 413 aaPredicted RBP2.84□□□□□ -1.95
SPG11-211ENST00000558561 FOXA3P55318 350 aaPredicted RBP2.84□□□□□ -1.95
SPG11-211ENST00000558561 CCL18P55774 89 aa2.84□□□□□ -1.95
SPG11-211ENST00000558561 SAPCD1Q5SSQ6 148 aa2.84□□□□□ -1.95
SPG11-211ENST00000558561 C1orf134Q5TEV5 83 aa2.84□□□□□ -1.95
SPG11-211ENST00000558561 Q6ZRN7 208 aaPredicted RBP2.84□□□□□ -1.95
SPG11-211ENST00000558561 COX8CQ7Z4L0 72 aa2.84□□□□□ -1.95
SPG11-211ENST00000558561 BAGE2Q86Y30 109 aa2.84□□□□□ -1.95
SPG11-211ENST00000558561 ARL6IP6Q8N6S5 226 aa2.84□□□□□ -1.95
SPG11-211ENST00000558561 C15orf53Q8NAA6 179 aa2.84□□□□□ -1.95
SPG11-211ENST00000558561 PRO0255Q9UI72 69 aa2.84□□□□□ -1.95
SPG11-211ENST00000558561 HERC2O95714 4834 aa2.84□□□□□ -1.96
SPG11-211ENST00000558561 TRAV1-1A0A0B4J248 108 aa2.83□□□□□ -1.96
SPG11-211ENST00000558561 TRAV4A0A0B4J268 109 aa2.83□□□□□ -1.96
SPG11-211ENST00000558561 TRBV6-1A0A0K0K1D8 114 aa2.83□□□□□ -1.96
SPG11-211ENST00000558561 C5orf52A6NGY3 159 aa2.83□□□□□ -1.96
SPG11-211ENST00000558561 UMAD1C9J7I0 102 aa2.83□□□□□ -1.96
SPG11-211ENST00000558561 K7EN84 100 aa2.83□□□□□ -1.96
SPG11-211ENST00000558561 DNAH10OSP0CZ25 163 aa2.83□□□□□ -1.96
SPG11-211ENST00000558561 AKR1C3P42330 323 aa2.83□□□□□ -1.96
SPG11-211ENST00000558561 RPL35P42766 123 aaKnown RBP2.83□□□□□ -1.96
SPG11-211ENST00000558561 LINC00315P59091 139 aa2.83□□□□□ -1.96
SPG11-211ENST00000558561 AKAP14Q86UN6 197 aa2.83□□□□□ -1.96
SPG11-211ENST00000558561 SLC51BQ86UW2 128 aa2.83□□□□□ -1.96
SPG11-211ENST00000558561 C6orf223Q8N319 242 aa2.83□□□□□ -1.96
SPG11-211ENST00000558561 OR10AG1Q8NH19 301 aa2.83□□□□□ -1.96
SPG11-211ENST00000558561 HIST1H2BAQ96A08 127 aa2.83□□□□□ -1.96
SPG11-211ENST00000558561 KCNS1Q96KK3 526 aa2.83□□□□□ -1.96
SPG11-211ENST00000558561 PARLQ9H300 379 aa2.83□□□□□ -1.96
SPG11-211ENST00000558561 MED9Q9NWA0 146 aa2.83□□□□□ -1.96
SPG11-211ENST00000558561 ZFP30Q9Y2G7 519 aa2.83□□□□□ -1.96
SPG11-211ENST00000558561 MRPS16Q9Y3D3 137 aaKnown RBP2.83□□□□□ -1.96
SPG11-211ENST00000558561 KIF25-AS1Q9Y6Z4 181 aa2.83□□□□□ -1.96
SPG11-211ENST00000558561 DNAH8Q96JB1 4490 aa2.83□□□□□ -1.96
SPG11-211ENST00000558561 IGHV3-38A0A0C4DH36 116 aa2.82□□□□□ -1.96
SPG11-211ENST00000558561 SERTM2A0A1B0GWG4 89 aa2.82□□□□□ -1.96
SPG11-211ENST00000558561 C19orf71A6NCJ1 209 aa2.82□□□□□ -1.96
SPG11-211ENST00000558561 FBLL1A6NHQ2 334 aaKnown RBP2.82□□□□□ -1.96
SPG11-211ENST00000558561 H3BNG1 76 aa2.82□□□□□ -1.96
SPG11-211ENST00000558561 K7EQM0 130 aa2.82□□□□□ -1.96
SPG11-211ENST00000558561 M0R381 172 aa2.82□□□□□ -1.96
SPG11-211ENST00000558561 SIVA1O15304 175 aa2.82□□□□□ -1.96
SPG11-211ENST00000558561 IGHV3-30P01768 117 aa2.82□□□□□ -1.96
SPG11-211ENST00000558561 IGHV3-33P01772 117 aa2.82□□□□□ -1.96
SPG11-211ENST00000558561 IGHV3-30-3P0DP02 117 aa2.82□□□□□ -1.96
SPG11-211ENST00000558561 IGHV3-30-5P0DP03 117 aa2.82□□□□□ -1.96
SPG11-211ENST00000558561 MGST1P10620 155 aaKnown RBP2.82□□□□□ -1.96
SPG11-211ENST00000558561 S100A4P26447 101 aaKnown RBP2.82□□□□□ -1.96
SPG11-211ENST00000558561 UBE2G1P62253 170 aa2.82□□□□□ -1.96
SPG11-211ENST00000558561 SRSF9Q13242 221 aaKnown RBP eCLIP2.82□□□□□ -1.96
SPG11-211ENST00000558561 WFDC2Q14508 124 aa2.82□□□□□ -1.96
SPG11-211ENST00000558561 MRPL23Q16540 153 aaKnown RBP2.82□□□□□ -1.96
SPG11-211ENST00000558561 CENPWQ5EE01 88 aa2.82□□□□□ -1.96
SPG11-211ENST00000558561 DNLZQ5SXM8 178 aa2.82□□□□□ -1.96
SPG11-211ENST00000558561 FAM162BQ5T6X4 162 aa2.82□□□□□ -1.96
SPG11-211ENST00000558561 NEGR1Q7Z3B1 354 aa2.82□□□□□ -1.96
SPG11-211ENST00000558561 SFRP2Q96HF1 295 aa2.82□□□□□ -1.96
SPG11-211ENST00000558561 FMC1Q96HJ9 113 aa2.82□□□□□ -1.96
SPG11-211ENST00000558561 NDFIP1Q9BT67 221 aa2.82□□□□□ -1.96
SPG11-211ENST00000558561 UPK3BQ9BT76 320 aa2.82□□□□□ -1.96
SPG11-211ENST00000558561 RNASE7Q9H1E1 156 aaKnown RBP2.82□□□□□ -1.96
SPG11-211ENST00000558561 IL36BQ9NZH7 164 aa2.82□□□□□ -1.96
SPG11-211ENST00000558561 ICOSQ9Y6W8 199 aa2.82□□□□□ -1.96
SPG11-211ENST00000558561 APOBP04114 4563 aaKnown RBP2.81□□□□□ -1.96
SPG11-211ENST00000558561 RYR1P21817 5038 aa2.81□□□□□ -1.96
SPG11-211ENST00000558561 SRP19P09132 144 aaKnown RBP2.81□□□□□ -1.96
SPG11-211ENST00000558561 LINC00694P0DN24 101 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms