RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 NEGR1Q7Z3B1 354 aa12.06□□□□□ -0.48
TPM1-214ENST00000558544 LINC00588Q9Y4M8 146 aa12.06□□□□□ -0.48
TPM1-214ENST00000558544 TRBV24-1A0A075B6N3 115 aa12.05□□□□□ -0.48
TPM1-214ENST00000558544 S100PP25815 95 aa12.05□□□□□ -0.48
TPM1-214ENST00000558544 RIGQ13278 110 aa12.05□□□□□ -0.48
TPM1-214ENST00000558544 SUMO4Q6EEV6 95 aa12.05□□□□□ -0.48
TPM1-214ENST00000558544 KCNIP4Q6PIL6 250 aa12.05□□□□□ -0.48
TPM1-214ENST00000558544 TRBV10-1A0A0K0K1A3 114 aa12.04□□□□□ -0.48
TPM1-214ENST00000558544 LINC00694P0DN24 101 aa12.04□□□□□ -0.48
TPM1-214ENST00000558544 RAB5AP20339 215 aa12.04□□□□□ -0.48
TPM1-214ENST00000558544 LYPD5Q6UWN5 251 aa12.04□□□□□ -0.48
TPM1-214ENST00000558544 MRPL54Q6P161 138 aaKnown RBP12.03□□□□□ -0.48
TPM1-214ENST00000558544 SH2D6Q7Z4S9 175 aa12.03□□□□□ -0.48
TPM1-214ENST00000558544 NEXN-AS1Q8NBZ9 246 aa12.03□□□□□ -0.48
TPM1-214ENST00000558544 ZNRF2Q8NHG8 242 aa12.03□□□□□ -0.48
TPM1-214ENST00000558544 CAMPP49913 170 aa12.02□□□□□ -0.49
TPM1-214ENST00000558544 RPL36AP83881 106 aaKnown RBP12.02□□□□□ -0.49
TPM1-214ENST00000558544 ATP6V0E2Q8NHE4 81 aa12.02□□□□□ -0.49
TPM1-214ENST00000558544 RPL36ALQ969Q0 106 aaKnown RBP12.02□□□□□ -0.49
TPM1-214ENST00000558544 TMEM191AQ9H0A3 160 aa12.02□□□□□ -0.49
TPM1-214ENST00000558544 MRPS16Q9Y3D3 137 aaKnown RBP12.02□□□□□ -0.49
TPM1-214ENST00000558544 TRAV9-1A0A075B6T8 112 aa12.01□□□□□ -0.49
TPM1-214ENST00000558544 TRAV26-2A0A0B4J265 109 aa12.01□□□□□ -0.49
TPM1-214ENST00000558544 H7C1H1 209 aa12.01□□□□□ -0.49
TPM1-214ENST00000558544 M0QY20 66 aa12.01□□□□□ -0.49
TPM1-214ENST00000558544 TRBV7-3A0A075B6L6 115 aa12□□□□□ -0.49
TPM1-214ENST00000558544 TMA7Q9Y2S6 64 aaKnown RBP12□□□□□ -0.49
TPM1-214ENST00000558544 A0A1B0GW15 77 aa11.99□□□□□ -0.49
TPM1-214ENST00000558544 A0A1B0GXF2 115 aa11.99□□□□□ -0.49
TPM1-214ENST00000558544 UBE2D3P61077 147 aa11.99□□□□□ -0.49
TPM1-214ENST00000558544 UBE2D2P62837 147 aa11.99□□□□□ -0.49
TPM1-214ENST00000558544 HBBP68871 147 aa11.99□□□□□ -0.49
TPM1-214ENST00000558544 RASL11AQ6T310 242 aa11.99□□□□□ -0.49
TPM1-214ENST00000558544 AMN1Q8IY45 258 aa11.99□□□□□ -0.49
TPM1-214ENST00000558544 GATD1Q8NB37 220 aa11.99□□□□□ -0.49
TPM1-214ENST00000558544 BTF3L4Q96K17 158 aa11.99□□□□□ -0.49
TPM1-214ENST00000558544 UPK3BQ9BT76 320 aa11.99□□□□□ -0.49
TPM1-214ENST00000558544 GTSF1LQ9H1H1 148 aa11.99□□□□□ -0.49
TPM1-214ENST00000558544 IGLV2-18A0A075B6J9 118 aa11.98□□□□□ -0.49
TPM1-214ENST00000558544 ATP5L2Q7Z4Y8 100 aa11.98□□□□□ -0.49
TPM1-214ENST00000558544 RNF185Q96GF1 192 aa11.98□□□□□ -0.49
TPM1-214ENST00000558544 RAB4AP20338 218 aa11.97□□□□□ -0.49
TPM1-214ENST00000558544 RPS10P46783 165 aaKnown RBP11.97□□□□□ -0.49
TPM1-214ENST00000558544 DNAJC30Q96LL9 226 aa11.97□□□□□ -0.49
TPM1-214ENST00000558544 IGHV3-38A0A0C4DH36 116 aa11.96□□□□□ -0.49
TPM1-214ENST00000558544 S100A8P05109 93 aa11.96□□□□□ -0.49
TPM1-214ENST00000558544 TIRAPP58753 221 aa11.96□□□□□ -0.49
TPM1-214ENST00000558544 RPL39LQ96EH5 51 aaKnown RBP11.96□□□□□ -0.49
TPM1-214ENST00000558544 NIT2Q9NQR4 276 aa11.96□□□□□ -0.49
TPM1-214ENST00000558544 TNFRSF18Q9Y5U5 241 aa11.96□□□□□ -0.49
TPM1-214ENST00000558544 FAM104BQ5XKR9 115 aa11.95□□□□□ -0.5
TPM1-214ENST00000558544 WFDC10BQ8IUB3 73 aa11.95□□□□□ -0.5
TPM1-214ENST00000558544 Q9H8V8 135 aa11.95□□□□□ -0.5
TPM1-214ENST00000558544 GAS8-AS1O95177 125 aa11.94□□□□□ -0.5
TPM1-214ENST00000558544 OR10J3Q5JRS4 329 aa11.94□□□□□ -0.5
TPM1-214ENST00000558544 LELP1Q5T871 98 aa11.94□□□□□ -0.5
TPM1-214ENST00000558544 SMKR1H3BMG3 65 aa11.93□□□□□ -0.5
TPM1-214ENST00000558544 M0R2N4 97 aa11.93□□□□□ -0.5
TPM1-214ENST00000558544 PHOX2AO14813 284 aa11.93□□□□□ -0.5
TPM1-214ENST00000558544 SIVA1O15304 175 aa11.93□□□□□ -0.5
TPM1-214ENST00000558544 NCR2O95944 276 aa11.93□□□□□ -0.5
TPM1-214ENST00000558544 MRPL51Q4U2R6 128 aaKnown RBP11.93□□□□□ -0.5
TPM1-214ENST00000558544 FRZBQ92765 325 aa11.93□□□□□ -0.5
TPM1-214ENST00000558544 MRAP2Q96G30 205 aa11.93□□□□□ -0.5
TPM1-214ENST00000558544 DNAH2Q9P225 4427 aa11.93□□□□□ -0.5
TPM1-214ENST00000558544 TRGC2P03986 189 aa11.92□□□□□ -0.5
TPM1-214ENST00000558544 DAZ4Q86SG3 579 aaKnown RBP11.92□□□□□ -0.5
TPM1-214ENST00000558544 DAZ3Q9NR90 486 aaKnown RBP11.92□□□□□ -0.5
TPM1-214ENST00000558544 FRAS1Q86XX4 4008 aa11.92□□□□□ -0.5
TPM1-214ENST00000558544 TRAV8-6A0A0B4J262 113 aa11.92□□□□□ -0.5
TPM1-214ENST00000558544 C1orf196B1AJZ1 125 aa11.92□□□□□ -0.5
TPM1-214ENST00000558544 TMEM136Q6ZRR5 245 aa11.92□□□□□ -0.5
TPM1-214ENST00000558544 NBDYA0A0U1RRE5 68 aa11.91□□□□□ -0.5
TPM1-214ENST00000558544 GNB1LQ9BYB4 327 aa11.91□□□□□ -0.5
TPM1-214ENST00000558544 TRBV6-8A0A0A6YYG3 113 aa11.89□□□□□ -0.51
TPM1-214ENST00000558544 SDHAF1A6NFY7 115 aa11.89□□□□□ -0.51
TPM1-214ENST00000558544 DEFB104AQ8WTQ1 72 aa11.89□□□□□ -0.51
TPM1-214ENST00000558544 TRAPPC1Q9Y5R8 145 aa11.89□□□□□ -0.51
TPM1-214ENST00000558544 DNAH10Q8IVF4 4471 aa11.88□□□□□ -0.51
TPM1-214ENST00000558544 TRBV6-5A0A0K0K1A5 114 aa11.88□□□□□ -0.51
TPM1-214ENST00000558544 D6R8Y8 96 aa11.88□□□□□ -0.51
TPM1-214ENST00000558544 CKS2P33552 79 aa11.88□□□□□ -0.51
TPM1-214ENST00000558544 FABP9Q0Z7S8 132 aa11.88□□□□□ -0.51
TPM1-214ENST00000558544 COX19Q49B96 90 aa11.88□□□□□ -0.51
TPM1-214ENST00000558544 Q6ZR54 194 aa11.88□□□□□ -0.51
TPM1-214ENST00000558544 NTM-AS1Q6ZSK4 140 aa11.88□□□□□ -0.51
TPM1-214ENST00000558544 NRACQ8N912 160 aa11.88□□□□□ -0.51
TPM1-214ENST00000558544 KRTAP1-5Q9BYS1 174 aa11.88□□□□□ -0.51
TPM1-214ENST00000558544 MRPL18Q9H0U6 180 aaKnown RBP11.88□□□□□ -0.51
TPM1-214ENST00000558544 ST20Q9HBF5 79 aa11.88□□□□□ -0.51
TPM1-214ENST00000558544 DNAH10OSP0CZ25 163 aa11.87□□□□□ -0.51
TPM1-214ENST00000558544 RAB5BP61020 215 aa11.87□□□□□ -0.51
TPM1-214ENST00000558544 TMEM97Q5BJF2 176 aa11.87□□□□□ -0.51
TPM1-214ENST00000558544 TTC32Q5I0X7 151 aa11.87□□□□□ -0.51
TPM1-214ENST00000558544 HLA-DQA1P01909 254 aa11.86□□□□□ -0.51
TPM1-214ENST00000558544 MT-ND6P03923 174 aa11.86□□□□□ -0.51
TPM1-214ENST00000558544 Q8N3U1 123 aa11.86□□□□□ -0.51
TPM1-214ENST00000558544 TMEM70Q9BUB7 260 aa11.86□□□□□ -0.51
TPM1-214ENST00000558544 PPP1R17O96001 155 aa11.85□□□□□ -0.51
TPM1-214ENST00000558544 IGHV3-30P01768 117 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms