RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 RMI2Q96E14 147 aa7.89□□□□□ -1.15
HERC1-202ENST00000558324 MED9Q9NWA0 146 aa7.89□□□□□ -1.15
HERC1-202ENST00000558324 TRBV6-8A0A0A6YYG3 113 aa7.88□□□□□ -1.15
HERC1-202ENST00000558324 PDE6DO43924 150 aa7.88□□□□□ -1.15
HERC1-202ENST00000558324 C1QBP02746 253 aa7.88□□□□□ -1.15
HERC1-202ENST00000558324 BCL2P10415 239 aa7.88□□□□□ -1.15
HERC1-202ENST00000558324 FER1L6-AS1Q8NA97 138 aa7.88□□□□□ -1.15
HERC1-202ENST00000558324 CHCHD5Q9BSY4 110 aa7.88□□□□□ -1.15
HERC1-202ENST00000558324 TMEM70Q9BUB7 260 aa7.88□□□□□ -1.15
HERC1-202ENST00000558324 TRBV20OR9-2A0A075B6H5 130 aa7.87□□□□□ -1.15
HERC1-202ENST00000558324 C19orf71A6NCJ1 209 aa7.87□□□□□ -1.15
HERC1-202ENST00000558324 P01737 135 aa7.87□□□□□ -1.15
HERC1-202ENST00000558324 IGLC6P0CF74 106 aa7.87□□□□□ -1.15
HERC1-202ENST00000558324 RPS20P60866 119 aaKnown RBP7.87□□□□□ -1.15
HERC1-202ENST00000558324 ELOBQ15370 118 aa7.87□□□□□ -1.15
HERC1-202ENST00000558324 LINC01620Q4KN68 170 aa7.87□□□□□ -1.15
HERC1-202ENST00000558324 MPV17L2Q567V2 206 aa7.87□□□□□ -1.15
HERC1-202ENST00000558324 C15orf54Q8N8G6 183 aa7.87□□□□□ -1.15
HERC1-202ENST00000558324 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.87□□□□□ -1.15
HERC1-202ENST00000558324 CHCHD7Q9BUK0 85 aa7.87□□□□□ -1.15
HERC1-202ENST00000558324 FAM30AQ9NZY2 134 aa7.87□□□□□ -1.15
HERC1-202ENST00000558324 COX11Q9Y6N1 276 aa7.87□□□□□ -1.15
HERC1-202ENST00000558324 KIF25-AS1Q9Y6Z4 181 aa7.87□□□□□ -1.15
HERC1-202ENST00000558324 CRPP02741 224 aa7.86□□□□□ -1.15
HERC1-202ENST00000558324 INAFM2P0DMQ5 153 aa7.86□□□□□ -1.15
HERC1-202ENST00000558324 Q6ZNX1 250 aa7.86□□□□□ -1.15
HERC1-202ENST00000558324 AKAP14Q86UN6 197 aa7.86□□□□□ -1.15
HERC1-202ENST00000558324 VAX2Q9UIW0 290 aa7.86□□□□□ -1.15
HERC1-202ENST00000558324 XKRY2A2RUG3 117 aa7.85□□□□□ -1.15
HERC1-202ENST00000558324 ANGP03950 147 aaKnown RBP7.85□□□□□ -1.15
HERC1-202ENST00000558324 CACNG7P62955 275 aa7.85□□□□□ -1.15
HERC1-202ENST00000558324 SUMO4Q6EEV6 95 aa7.85□□□□□ -1.15
HERC1-202ENST00000558324 CLPSL2Q6UWE3 100 aa7.85□□□□□ -1.15
HERC1-202ENST00000558324 Q8N976 141 aa7.85□□□□□ -1.15
HERC1-202ENST00000558324 SMIM12Q96EX1 92 aa7.85□□□□□ -1.15
HERC1-202ENST00000558324 C1orf43Q9BWL3 253 aa7.85□□□□□ -1.15
HERC1-202ENST00000558324 DNAH8Q96JB1 4490 aa7.84□□□□□ -1.15
HERC1-202ENST00000558324 Q0VG73 95 aa7.84□□□□□ -1.15
HERC1-202ENST00000558324 GAGE6Q13070 117 aa7.84□□□□□ -1.15
HERC1-202ENST00000558324 LYZL1Q6UWQ5 148 aa7.84□□□□□ -1.15
HERC1-202ENST00000558324 ENHOQ6UWT2 76 aa7.84□□□□□ -1.15
HERC1-202ENST00000558324 NTM-AS1Q6ZSK4 140 aa7.84□□□□□ -1.15
HERC1-202ENST00000558324 C9orf62Q8N4C0 152 aa7.84□□□□□ -1.15
HERC1-202ENST00000558324 TRBV25-1A0A075B6N4 114 aa7.83□□□□□ -1.16
HERC1-202ENST00000558324 FAM229AH3BQW9 127 aa7.83□□□□□ -1.16
HERC1-202ENST00000558324 H7C1H1 209 aa7.83□□□□□ -1.16
HERC1-202ENST00000558324 M0QY20 66 aa7.83□□□□□ -1.16
HERC1-202ENST00000558324 HLA-DQA1P01909 254 aa7.83□□□□□ -1.16
HERC1-202ENST00000558324 ATRAIDQ6UW56 229 aa7.83□□□□□ -1.16
HERC1-202ENST00000558324 ALKAL2Q6UX46 152 aa7.83□□□□□ -1.16
HERC1-202ENST00000558324 NUDT10Q8NFP7 164 aa7.83□□□□□ -1.16
HERC1-202ENST00000558324 DEFB104AQ8WTQ1 72 aa7.83□□□□□ -1.16
HERC1-202ENST00000558324 NUDT11Q96G61 164 aa7.83□□□□□ -1.16
HERC1-202ENST00000558324 BIN3Q9NQY0 253 aa7.83□□□□□ -1.16
HERC1-202ENST00000558324 F2Z2F3 143 aa7.82□□□□□ -1.16
HERC1-202ENST00000558324 TRGC1P0CF51 173 aa7.82□□□□□ -1.16
HERC1-202ENST00000558324 TAGLN2P37802 199 aaKnown RBP7.82□□□□□ -1.16
HERC1-202ENST00000558324 NKX2-5P52952 324 aaPredicted RBP7.82□□□□□ -1.16
HERC1-202ENST00000558324 PKIAP61925 76 aa7.82□□□□□ -1.16
HERC1-202ENST00000558324 TMEM97Q5BJF2 176 aa7.82□□□□□ -1.16
HERC1-202ENST00000558324 RNASE7Q9H1E1 156 aaKnown RBP7.82□□□□□ -1.16
HERC1-202ENST00000558324 K7EN84 100 aa7.81□□□□□ -1.16
HERC1-202ENST00000558324 NTF3P20783 257 aa7.81□□□□□ -1.16
HERC1-202ENST00000558324 CTRLP40313 264 aa7.81□□□□□ -1.16
HERC1-202ENST00000558324 RBX1P62877 108 aa7.81□□□□□ -1.16
HERC1-202ENST00000558324 RASL11AQ6T310 242 aa7.81□□□□□ -1.16
HERC1-202ENST00000558324 DPH3P1Q9H4G8 78 aa7.81□□□□□ -1.16
HERC1-202ENST00000558324 RPP21Q9H633 154 aaKnown RBP7.81□□□□□ -1.16
HERC1-202ENST00000558324 IGHV1-24A0A0C4DH33 117 aa7.8□□□□□ -1.16
HERC1-202ENST00000558324 CEBPGP53567 150 aa7.8□□□□□ -1.16
HERC1-202ENST00000558324 TWIST1Q15672 202 aa7.8□□□□□ -1.16
HERC1-202ENST00000558324 Q6ZSA8 131 aa7.8□□□□□ -1.16
HERC1-202ENST00000558324 LINC00269Q8N2A0 174 aa7.8□□□□□ -1.16
HERC1-202ENST00000558324 OCC1Q8TAD7 63 aa7.8□□□□□ -1.16
HERC1-202ENST00000558324 USP17L23D6RBM5 183 aa7.79□□□□□ -1.16
HERC1-202ENST00000558324 BLOC1S1P78537 153 aa7.79□□□□□ -1.16
HERC1-202ENST00000558324 MIAQ16674 131 aa7.79□□□□□ -1.16
HERC1-202ENST00000558324 IQCJQ1A5X6 159 aa7.79□□□□□ -1.16
HERC1-202ENST00000558324 IGLV10-54A0A075B6I4 117 aa7.78□□□□□ -1.16
HERC1-202ENST00000558324 TRAV26-2A0A0B4J265 109 aa7.78□□□□□ -1.16
HERC1-202ENST00000558324 C14orf177Q52M58 125 aa7.78□□□□□ -1.16
HERC1-202ENST00000558324 SCXQ7RTU7 201 aa7.78□□□□□ -1.16
HERC1-202ENST00000558324 LINC00528Q8N1L1 170 aa7.78□□□□□ -1.16
HERC1-202ENST00000558324 TMEM243Q9BU79 118 aa7.78□□□□□ -1.16
HERC1-202ENST00000558324 NIT2Q9NQR4 276 aa7.78□□□□□ -1.16
HERC1-202ENST00000558324 VPS13BQ7Z7G8 4022 aa7.77□□□□□ -1.17
HERC1-202ENST00000558324 REG3AQ06141 175 aa7.77□□□□□ -1.17
HERC1-202ENST00000558324 GTSF1Q8WW33 167 aa7.77□□□□□ -1.17
HERC1-202ENST00000558324 PRR34Q9NV39 138 aa7.77□□□□□ -1.17
HERC1-202ENST00000558324 TMEM250H0YL14 139 aa7.76□□□□□ -1.17
HERC1-202ENST00000558324 UBE2L6O14933 153 aa7.76□□□□□ -1.17
HERC1-202ENST00000558324 GATCO43716 136 aaKnown RBP7.76□□□□□ -1.17
HERC1-202ENST00000558324 AMTP48728 403 aa7.76□□□□□ -1.17
HERC1-202ENST00000558324 FOXA3P55318 350 aaPredicted RBP7.76□□□□□ -1.17
HERC1-202ENST00000558324 COTL1Q14019 142 aa7.76□□□□□ -1.17
HERC1-202ENST00000558324 WDR73Q6P4I2 378 aa7.76□□□□□ -1.17
HERC1-202ENST00000558324 GATD1Q8NB37 220 aa7.76□□□□□ -1.17
HERC1-202ENST00000558324 C20orf203Q8NBC4 194 aa7.76□□□□□ -1.17
HERC1-202ENST00000558324 RPL39LQ96EH5 51 aaKnown RBP7.76□□□□□ -1.17
HERC1-202ENST00000558324 CNFNQ9BYD5 112 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms