RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 S100PP25815 95 aa4.18□□□□□ -1.74
FOXN3-218ENST00000557718 CAMPP49913 170 aa4.18□□□□□ -1.74
FOXN3-218ENST00000557718 HBBP68871 147 aa4.18□□□□□ -1.74
FOXN3-218ENST00000557718 SLAQ13239 276 aa4.18□□□□□ -1.74
FOXN3-218ENST00000557718 RIGQ13278 110 aa4.18□□□□□ -1.74
FOXN3-218ENST00000557718 ODF1Q14990 250 aa4.18□□□□□ -1.74
FOXN3-218ENST00000557718 TWIST1Q15672 202 aa4.18□□□□□ -1.74
FOXN3-218ENST00000557718 LGALS9BQ3B8N2 356 aa4.18□□□□□ -1.74
FOXN3-218ENST00000557718 SPANXN1Q5VSR9 72 aa4.18□□□□□ -1.74
FOXN3-218ENST00000557718 CFAP126Q5VTH2 177 aa4.18□□□□□ -1.74
FOXN3-218ENST00000557718 AMN1Q8IY45 258 aa4.18□□□□□ -1.74
FOXN3-218ENST00000557718 C14orf178Q8N769 122 aaPredicted RBP4.18□□□□□ -1.74
FOXN3-218ENST00000557718 ZNF479Q96JC4 524 aa4.18□□□□□ -1.74
FOXN3-218ENST00000557718 FAM210BQ96KR6 192 aa4.18□□□□□ -1.74
FOXN3-218ENST00000557718 TMEM191AQ9H0A3 160 aa4.18□□□□□ -1.74
FOXN3-218ENST00000557718 Q9UF83 564 aa4.18□□□□□ -1.74
FOXN3-218ENST00000557718 VPS13DQ5THJ4 4388 aa4.18□□□□□ -1.74
FOXN3-218ENST00000557718 LYRM9A8MSI8 78 aa4.17□□□□□ -1.74
FOXN3-218ENST00000557718 SMKR1H3BMG3 65 aa4.17□□□□□ -1.74
FOXN3-218ENST00000557718 GATA1P15976 413 aaPredicted RBP4.17□□□□□ -1.74
FOXN3-218ENST00000557718 RAB4AP20338 218 aa4.17□□□□□ -1.74
FOXN3-218ENST00000557718 RAB5AP20339 215 aa4.17□□□□□ -1.74
FOXN3-218ENST00000557718 C12orf74Q32Q52 190 aa4.17□□□□□ -1.74
FOXN3-218ENST00000557718 MRPL51Q4U2R6 128 aaKnown RBP4.17□□□□□ -1.74
FOXN3-218ENST00000557718 PIK3CD-AS1Q5SR53 167 aa4.17□□□□□ -1.74
FOXN3-218ENST00000557718 FAM104BQ5XKR9 115 aa4.17□□□□□ -1.74
FOXN3-218ENST00000557718 RASL11AQ6T310 242 aa4.17□□□□□ -1.74
FOXN3-218ENST00000557718 PRSS3P2Q8NHM4 247 aa4.17□□□□□ -1.74
FOXN3-218ENST00000557718 C18orf15Q96N68 181 aa4.17□□□□□ -1.74
FOXN3-218ENST00000557718 EDA2RQ9HAV5 297 aa4.17□□□□□ -1.74
FOXN3-218ENST00000557718 IGHV3-73A0A0B4J1V6 119 aa4.16□□□□□ -1.74
FOXN3-218ENST00000557718 TRAV26-2A0A0B4J265 109 aa4.16□□□□□ -1.74
FOXN3-218ENST00000557718 TRAV4A0A0B4J268 109 aa4.16□□□□□ -1.74
FOXN3-218ENST00000557718 A0A1B0GW15 77 aa4.16□□□□□ -1.74
FOXN3-218ENST00000557718 NCR2O95944 276 aa4.16□□□□□ -1.74
FOXN3-218ENST00000557718 IGHV3-53P01767 116 aa4.16□□□□□ -1.74
FOXN3-218ENST00000557718 DEFB130BP0DP73 79 aa4.16□□□□□ -1.74
FOXN3-218ENST00000557718 DEFB130AP0DP74 79 aa4.16□□□□□ -1.74
FOXN3-218ENST00000557718 RPS10P46783 165 aaKnown RBP4.16□□□□□ -1.74
FOXN3-218ENST00000557718 NANOS2P60321 138 aaKnown RBP4.16□□□□□ -1.74
FOXN3-218ENST00000557718 KRTAP10-6P60371 365 aaPredicted RBP4.16□□□□□ -1.74
FOXN3-218ENST00000557718 KIAA1644Q3SXP7 199 aa4.16□□□□□ -1.74
FOXN3-218ENST00000557718 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.16□□□□□ -1.74
FOXN3-218ENST00000557718 AP1S3Q96PC3 154 aa4.16□□□□□ -1.74
FOXN3-218ENST00000557718 NDUFAF3Q9BU61 184 aa4.16□□□□□ -1.74
FOXN3-218ENST00000557718 GNB1LQ9BYB4 327 aa4.16□□□□□ -1.74
FOXN3-218ENST00000557718 DPH3P1Q9H4G8 78 aa4.16□□□□□ -1.74
FOXN3-218ENST00000557718 DNAH1Q9P2D7 4330 aa4.16□□□□□ -1.74
FOXN3-218ENST00000557718 A8MWV9 139 aa4.15□□□□□ -1.75
FOXN3-218ENST00000557718 M0QY20 66 aa4.15□□□□□ -1.75
FOXN3-218ENST00000557718 HLA-DQA1P01909 254 aa4.15□□□□□ -1.75
FOXN3-218ENST00000557718 TRGC2P03986 189 aa4.15□□□□□ -1.75
FOXN3-218ENST00000557718 TRGC1P0CF51 173 aa4.15□□□□□ -1.75
FOXN3-218ENST00000557718 SPART-AS1P0CW21 52 aa4.15□□□□□ -1.75
FOXN3-218ENST00000557718 P0DMU3 169 aa4.15□□□□□ -1.75
FOXN3-218ENST00000557718 FAM231AP0DMU4 169 aa4.15□□□□□ -1.75
FOXN3-218ENST00000557718 FAM231CP0DMU5 169 aa4.15□□□□□ -1.75
FOXN3-218ENST00000557718 RAB4BP61018 213 aa4.15□□□□□ -1.75
FOXN3-218ENST00000557718 FABP9Q0Z7S8 132 aa4.15□□□□□ -1.75
FOXN3-218ENST00000557718 FAM74A4Q5TZK3 123 aa4.15□□□□□ -1.75
FOXN3-218ENST00000557718 Q6ZTC4 211 aa4.15□□□□□ -1.75
FOXN3-218ENST00000557718 NRACQ8N912 160 aa4.15□□□□□ -1.75
FOXN3-218ENST00000557718 FRZBQ92765 325 aa4.15□□□□□ -1.75
FOXN3-218ENST00000557718 BORCS7Q96B45 105 aa4.15□□□□□ -1.75
FOXN3-218ENST00000557718 RPL39LQ96EH5 51 aaKnown RBP4.15□□□□□ -1.75
FOXN3-218ENST00000557718 U3KQK5 164 aa4.15□□□□□ -1.75
FOXN3-218ENST00000557718 DNAH6Q9C0G6 4158 aa4.15□□□□□ -1.75
FOXN3-218ENST00000557718 ALMS1Q8TCU4 4167 aa4.14□□□□□ -1.75
FOXN3-218ENST00000557718 TRGV2A0A075B6R0 118 aa4.14□□□□□ -1.75
FOXN3-218ENST00000557718 LOC100131303A0A0U1RQF7 123 aa4.14□□□□□ -1.75
FOXN3-218ENST00000557718 D6R8Y8 96 aa4.14□□□□□ -1.75
FOXN3-218ENST00000557718 NPYP01303 97 aa4.14□□□□□ -1.75
FOXN3-218ENST00000557718 MT-ND6P03923 174 aa4.14□□□□□ -1.75
FOXN3-218ENST00000557718 S100A8P05109 93 aa4.14□□□□□ -1.75
FOXN3-218ENST00000557718 MGPP08493 103 aa4.14□□□□□ -1.75
FOXN3-218ENST00000557718 LINC00694P0DN24 101 aa4.14□□□□□ -1.75
FOXN3-218ENST00000557718 DAD1P61803 113 aa4.14□□□□□ -1.75
FOXN3-218ENST00000557718 ZNF56Q15929 161 aa4.14□□□□□ -1.75
FOXN3-218ENST00000557718 COX19Q49B96 90 aa4.14□□□□□ -1.75
FOXN3-218ENST00000557718 ZFP2Q6ZN57 461 aa4.14□□□□□ -1.75
FOXN3-218ENST00000557718 SLC25A29Q8N8R3 303 aa4.14□□□□□ -1.75
FOXN3-218ENST00000557718 OR4C5Q8NGB2 326 aa4.14□□□□□ -1.75
FOXN3-218ENST00000557718 URB1-AS1Q96HZ7 61 aa4.14□□□□□ -1.75
FOXN3-218ENST00000557718 VSIG2Q96IQ7 327 aa4.14□□□□□ -1.75
FOXN3-218ENST00000557718 ALKBH7Q9BT30 221 aaPredicted RBP4.14□□□□□ -1.75
FOXN3-218ENST00000557718 TRAPPC1Q9Y5R8 145 aa4.14□□□□□ -1.75
FOXN3-218ENST00000557718 RHODO00212 210 aa4.13□□□□□ -1.75
FOXN3-218ENST00000557718 APCSP02743 223 aa4.13□□□□□ -1.75
FOXN3-218ENST00000557718 CRYBA4P53673 196 aa4.13□□□□□ -1.75
FOXN3-218ENST00000557718 IQCJQ1A5X6 159 aa4.13□□□□□ -1.75
FOXN3-218ENST00000557718 KRTAP5-11Q6L8G4 156 aa4.13□□□□□ -1.75
FOXN3-218ENST00000557718 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.13□□□□□ -1.75
FOXN3-218ENST00000557718 NEXN-AS1Q8NBZ9 246 aa4.13□□□□□ -1.75
FOXN3-218ENST00000557718 C11orf45Q8TAV5 145 aa4.13□□□□□ -1.75
FOXN3-218ENST00000557718 IGLV2-18A0A075B6J9 118 aa4.12□□□□□ -1.75
FOXN3-218ENST00000557718 TRBV6-5A0A0K0K1A5 114 aa4.12□□□□□ -1.75
FOXN3-218ENST00000557718 TEX48A0A1B0GUV7 120 aa4.12□□□□□ -1.75
FOXN3-218ENST00000557718 K7EQD1 137 aa4.12□□□□□ -1.75
FOXN3-218ENST00000557718 HIST1H2BKO60814 126 aa4.12□□□□□ -1.75
FOXN3-218ENST00000557718 TNFRSF6BO95407 300 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms