RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 Q56UQ5 140 aa2.73□□□□□ -1.97
PRPF39-212ENST00000557477 C2orf91Q6ZV80 131 aa2.73□□□□□ -1.97
PRPF39-212ENST00000557477 VKORC1L1Q8N0U8 176 aa2.73□□□□□ -1.97
PRPF39-212ENST00000557477 ANKRD29Q8N6D5 301 aa2.73□□□□□ -1.97
PRPF39-212ENST00000557477 ZNF563Q8TA94 476 aa2.73□□□□□ -1.97
PRPF39-212ENST00000557477 SCGB3A2Q96PL1 93 aa2.73□□□□□ -1.97
PRPF39-212ENST00000557477 SMIM7Q9BQ49 75 aa2.73□□□□□ -1.97
PRPF39-212ENST00000557477 TMEM147Q9BVK8 224 aa2.73□□□□□ -1.97
PRPF39-212ENST00000557477 MRPL20Q9BYC9 149 aaKnown RBP2.73□□□□□ -1.97
PRPF39-212ENST00000557477 IGKV2-28A0A075B6P5 120 aa2.72□□□□□ -1.97
PRPF39-212ENST00000557477 SMIM26A0A096LP01 95 aa2.72□□□□□ -1.97
PRPF39-212ENST00000557477 LOC107986453A0A1B0GWG9 222 aa2.72□□□□□ -1.97
PRPF39-212ENST00000557477 A8MWL6 223 aa2.72□□□□□ -1.97
PRPF39-212ENST00000557477 OOSP1A8MZH6 123 aa2.72□□□□□ -1.97
PRPF39-212ENST00000557477 E7EQL1 145 aa2.72□□□□□ -1.97
PRPF39-212ENST00000557477 IGKV2D-28P01615 120 aa2.72□□□□□ -1.97
PRPF39-212ENST00000557477 P01737 135 aa2.72□□□□□ -1.97
PRPF39-212ENST00000557477 PSMB8P28062 276 aa2.72□□□□□ -1.97
PRPF39-212ENST00000557477 FOXA3P55318 350 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-212ENST00000557477 SMIM11AP58511 58 aa2.72□□□□□ -1.97
PRPF39-212ENST00000557477 CACNG7P62955 275 aa2.72□□□□□ -1.97
PRPF39-212ENST00000557477 CCL20P78556 96 aa2.72□□□□□ -1.97
PRPF39-212ENST00000557477 IL15RAQ13261 267 aa2.72□□□□□ -1.97
PRPF39-212ENST00000557477 ABCA11PQ4W5N1 156 aa2.72□□□□□ -1.97
PRPF39-212ENST00000557477 SLC48A1Q6P1K1 146 aa2.72□□□□□ -1.97
PRPF39-212ENST00000557477 TEN1Q86WV5 123 aa2.72□□□□□ -1.97
PRPF39-212ENST00000557477 RPS4Y2Q8TD47 263 aa2.72□□□□□ -1.97
PRPF39-212ENST00000557477 CARD19Q96LW7 228 aa2.72□□□□□ -1.97
PRPF39-212ENST00000557477 PDCD1LG2Q9BQ51 273 aa2.72□□□□□ -1.97
PRPF39-212ENST00000557477 EML6Q6ZMW3 1958 aa2.72□□□□□ -1.97
PRPF39-212ENST00000557477 USF3Q68DE3 2245 aa2.72□□□□□ -1.97
PRPF39-212ENST00000557477 CR1P17927 2039 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 TRAV13-1A0A0B4J241 112 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 TRAV26-2A0A0B4J265 109 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 TRAV4A0A0B4J268 109 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 IGHV1-69DA0A0B4J2H0 117 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 C5orf63A6NC05 138 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 B4DSR2 109 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 BPY2O14599 106 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 MRPL33O75394 65 aaKnown RBP2.71□□□□□ -1.98
PRPF39-212ENST00000557477 WISP3O95389 354 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-212ENST00000557477 P0DMU3 169 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 FAM231AP0DMU4 169 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 FAM231CP0DMU5 169 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 COX7CP15954 63 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 S100A3P33764 101 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 MPV17P39210 176 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 MOBPQ13875 183 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 FAM201AQ5SY85 155 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 MRPL2Q5T653 305 aaKnown RBP2.71□□□□□ -1.98
PRPF39-212ENST00000557477 CFAP126Q5VTH2 177 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 NOXRED1Q6NXP6 359 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 RPS27LQ71UM5 84 aaKnown RBP2.71□□□□□ -1.98
PRPF39-212ENST00000557477 AAED1Q7RTV5 226 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 HMGN2P46Q86SG4 172 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 TSKUQ8WUA8 353 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 GNB1LQ9BYB4 327 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 IMUPQ9GZP8 106 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 FGF23Q9GZV9 251 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-212ENST00000557477 GNG13Q9P2W3 67 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 LAMTOR3Q9UHA4 124 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 HILPDAQ9Y5L2 63 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 MPDZO75970 2070 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 CUBNO60494 3623 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 ZANQ9Y493 2812 aa2.71□□□□□ -1.98
PRPF39-212ENST00000557477 IGLV4-60A0A075B6I1 120 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 TRAV27A0A087WT01 109 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 A0A096LNT2 108 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 TRBV7-7A0A0K0K1E9 115 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 TEX50A0A1B0GTY4 177 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 MDFIC2A0A1B0GVS7 189 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 RBAKDNA6NC62 111 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 LRCOL1A6NCL2 159 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 FAM24AA6NFZ4 105 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 C2orf70A6NJV1 201 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 CEBPZOSA8MTT3 80 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 IGLL5B9A064 214 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 NDUFC2-KCTD14E9PQ53 114 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 F2Z2F3 143 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 MSMBP08118 114 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 PYYP10082 97 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 FGF6P10767 208 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 FKBP2P26885 142 aaKnown RBP2.7□□□□□ -1.98
PRPF39-212ENST00000557477 CSN1S1P47710 185 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 KRTAP13-3Q3SY46 172 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 PSMG4Q5JS54 123 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 EBLN2Q6P2I7 272 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 TCF23Q7RTU1 214 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 LHFPL1Q86WI0 220 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 ZNF645Q8N7E2 425 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 NUP35Q8NFH5 326 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 CIRBP-AS1Q8TBR5 109 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 BORCS8Q96FH0 119 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 EMC6Q9BV81 110 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 AGPAT4-IT1Q9H0P7 198 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 SLC39A9Q9NUM3 307 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 NINQ8N4C6 2090 aa2.7□□□□□ -1.98
PRPF39-212ENST00000557477 MEGF8Q7Z7M0 2845 aa2.69□□□□□ -1.98
PRPF39-212ENST00000557477 ABCA1O95477 2261 aa2.69□□□□□ -1.98
PRPF39-212ENST00000557477 IGHV3OR16-9A0A0B4J2B5 98 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms