RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 H7C1H1 209 aa10.16□□□□□ -0.78
VIPAS39-210ENST00000557466 RASL11AQ6T310 242 aa10.16□□□□□ -0.78
VIPAS39-210ENST00000557466 TMEM191AQ9H0A3 160 aa10.16□□□□□ -0.78
VIPAS39-210ENST00000557466 NBDYA0A0U1RRE5 68 aa10.15□□□□□ -0.78
VIPAS39-210ENST00000557466 SIVA1O15304 175 aa10.15□□□□□ -0.78
VIPAS39-210ENST00000557466 LELP1Q5T871 98 aa10.15□□□□□ -0.78
VIPAS39-210ENST00000557466 MRPL54Q6P161 138 aaKnown RBP10.15□□□□□ -0.78
VIPAS39-210ENST00000557466 Q6ZR54 194 aa10.15□□□□□ -0.78
VIPAS39-210ENST00000557466 GATD1Q8NB37 220 aa10.15□□□□□ -0.78
VIPAS39-210ENST00000557466 IGHV3-38A0A0C4DH36 116 aa10.14□□□□□ -0.79
VIPAS39-210ENST00000557466 A0A1B0GXF2 115 aa10.14□□□□□ -0.79
VIPAS39-210ENST00000557466 AMN1Q8IY45 258 aa10.14□□□□□ -0.79
VIPAS39-210ENST00000557466 RNF185Q96GF1 192 aa10.14□□□□□ -0.79
VIPAS39-210ENST00000557466 DNAJC30Q96LL9 226 aa10.14□□□□□ -0.79
VIPAS39-210ENST00000557466 KRTAP1-5Q9BYS1 174 aa10.14□□□□□ -0.79
VIPAS39-210ENST00000557466 CAMPP49913 170 aa10.13□□□□□ -0.79
VIPAS39-210ENST00000557466 OR10J3Q5JRS4 329 aa10.13□□□□□ -0.79
VIPAS39-210ENST00000557466 NIT2Q9NQR4 276 aa10.13□□□□□ -0.79
VIPAS39-210ENST00000557466 TNFRSF18Q9Y5U5 241 aa10.13□□□□□ -0.79
VIPAS39-210ENST00000557466 KMT2AQ03164 3969 aa10.13□□□□□ -0.79
VIPAS39-210ENST00000557466 A0A1B0GW15 77 aa10.12□□□□□ -0.79
VIPAS39-210ENST00000557466 RAB4AP20338 218 aa10.12□□□□□ -0.79
VIPAS39-210ENST00000557466 HBBP68871 147 aa10.12□□□□□ -0.79
VIPAS39-210ENST00000557466 RPL39LQ96EH5 51 aaKnown RBP10.12□□□□□ -0.79
VIPAS39-210ENST00000557466 CTDSP1Q9GZU7 261 aa10.12□□□□□ -0.79
VIPAS39-210ENST00000557466 A0A087WWC5 75 aa10.11□□□□□ -0.79
VIPAS39-210ENST00000557466 TRAV8-6A0A0B4J262 113 aa10.11□□□□□ -0.79
VIPAS39-210ENST00000557466 C7orf77A4D0Y5 90 aa10.11□□□□□ -0.79
VIPAS39-210ENST00000557466 GAS8-AS1O95177 125 aa10.11□□□□□ -0.79
VIPAS39-210ENST00000557466 DNAH10OSP0CZ25 163 aa10.11□□□□□ -0.79
VIPAS39-210ENST00000557466 TTC32Q5I0X7 151 aa10.11□□□□□ -0.79
VIPAS39-210ENST00000557466 ATP5L2Q7Z4Y8 100 aa10.11□□□□□ -0.79
VIPAS39-210ENST00000557466 CLRN3Q8NCR9 226 aa10.11□□□□□ -0.79
VIPAS39-210ENST00000557466 S100A8P05109 93 aa10.1□□□□□ -0.79
VIPAS39-210ENST00000557466 FAM104BQ5XKR9 115 aa10.1□□□□□ -0.79
VIPAS39-210ENST00000557466 DAZ4Q86SG3 579 aaKnown RBP10.1□□□□□ -0.79
VIPAS39-210ENST00000557466 MRAP2Q96G30 205 aa10.1□□□□□ -0.79
VIPAS39-210ENST00000557466 DAZ3Q9NR90 486 aaKnown RBP10.1□□□□□ -0.79
VIPAS39-210ENST00000557466 TRBV6-8A0A0A6YYG3 113 aa10.09□□□□□ -0.79
VIPAS39-210ENST00000557466 SMKR1H3BMG3 65 aa10.09□□□□□ -0.79
VIPAS39-210ENST00000557466 NCR2O95944 276 aa10.09□□□□□ -0.79
VIPAS39-210ENST00000557466 APOC3P02656 99 aa10.09□□□□□ -0.79
VIPAS39-210ENST00000557466 RPS10P46783 165 aaKnown RBP10.09□□□□□ -0.79
VIPAS39-210ENST00000557466 RHEBQ15382 184 aa10.09□□□□□ -0.79
VIPAS39-210ENST00000557466 MRPL51Q4U2R6 128 aaKnown RBP10.09□□□□□ -0.79
VIPAS39-210ENST00000557466 SLC7A5P1Q8MH63 180 aa10.09□□□□□ -0.79
VIPAS39-210ENST00000557466 Q8N3U1 123 aa10.09□□□□□ -0.79
VIPAS39-210ENST00000557466 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.09□□□□□ -0.79
VIPAS39-210ENST00000557466 FRZBQ92765 325 aa10.09□□□□□ -0.79
VIPAS39-210ENST00000557466 IMMP2LQ96T52 175 aa10.09□□□□□ -0.79
VIPAS39-210ENST00000557466 NDUFA5Q16718 116 aa10.08□□□□□ -0.8
VIPAS39-210ENST00000557466 LINC01556Q5JQF7 62 aa10.08□□□□□ -0.8
VIPAS39-210ENST00000557466 NTM-AS1Q6ZSK4 140 aa10.08□□□□□ -0.8
VIPAS39-210ENST00000557466 BTF3L4Q96K17 158 aa10.08□□□□□ -0.8
VIPAS39-210ENST00000557466 RPS10P5Q9NQ39 176 aa10.08□□□□□ -0.8
VIPAS39-210ENST00000557466 TRBV6-5A0A0K0K1A5 114 aa10.07□□□□□ -0.8
VIPAS39-210ENST00000557466 IGHV3-30P01768 117 aa10.07□□□□□ -0.8
VIPAS39-210ENST00000557466 IGHV3-33P01772 117 aa10.07□□□□□ -0.8
VIPAS39-210ENST00000557466 IGHV3-30-3P0DP02 117 aa10.07□□□□□ -0.8
VIPAS39-210ENST00000557466 IGHV3-30-5P0DP03 117 aa10.07□□□□□ -0.8
VIPAS39-210ENST00000557466 KCNIP4Q6PIL6 250 aa10.07□□□□□ -0.8
VIPAS39-210ENST00000557466 DEFB104AQ8WTQ1 72 aa10.07□□□□□ -0.8
VIPAS39-210ENST00000557466 TMEM242Q9NWH2 141 aa10.07□□□□□ -0.8
VIPAS39-210ENST00000557466 SDHAF1A6NFY7 115 aa10.06□□□□□ -0.8
VIPAS39-210ENST00000557466 RTL8CO15255 209 aa10.06□□□□□ -0.8
VIPAS39-210ENST00000557466 TMEM97Q5BJF2 176 aa10.06□□□□□ -0.8
VIPAS39-210ENST00000557466 C1orf134Q5TEV5 83 aa10.06□□□□□ -0.8
VIPAS39-210ENST00000557466 NIT1Q86X76 327 aa10.06□□□□□ -0.8
VIPAS39-210ENST00000557466 SVBPQ8N300 66 aa10.06□□□□□ -0.8
VIPAS39-210ENST00000557466 NRACQ8N912 160 aa10.06□□□□□ -0.8
VIPAS39-210ENST00000557466 TRAV9-1A0A075B6T8 112 aa10.05□□□□□ -0.8
VIPAS39-210ENST00000557466 SNAPINO95295 136 aa10.05□□□□□ -0.8
VIPAS39-210ENST00000557466 C6orf223Q8N319 242 aa10.05□□□□□ -0.8
VIPAS39-210ENST00000557466 URGCP-MRPS24S4R325 110 aa10.05□□□□□ -0.8
VIPAS39-210ENST00000557466 TRBV25-1A0A075B6N4 114 aa10.04□□□□□ -0.8
VIPAS39-210ENST00000557466 TRAV9-2A0A087WT02 112 aa10.04□□□□□ -0.8
VIPAS39-210ENST00000557466 IGHV1-24A0A0C4DH33 117 aa10.04□□□□□ -0.8
VIPAS39-210ENST00000557466 S100PP25815 95 aa10.04□□□□□ -0.8
VIPAS39-210ENST00000557466 IQCJQ1A5X6 159 aa10.04□□□□□ -0.8
VIPAS39-210ENST00000557466 TMEM70Q9BUB7 260 aa10.04□□□□□ -0.8
VIPAS39-210ENST00000557466 ST20Q9HBF5 79 aa10.04□□□□□ -0.8
VIPAS39-210ENST00000557466 EPPK1P58107 5090 aaKnown RBP10.03□□□□□ -0.8
VIPAS39-210ENST00000557466 D6R8Y8 96 aa10.03□□□□□ -0.8
VIPAS39-210ENST00000557466 K7EP13 123 aa10.03□□□□□ -0.8
VIPAS39-210ENST00000557466 CKS2P33552 79 aa10.03□□□□□ -0.8
VIPAS39-210ENST00000557466 COTL1Q14019 142 aa10.03□□□□□ -0.8
VIPAS39-210ENST00000557466 C10orf126Q8N4M7 172 aa10.03□□□□□ -0.8
VIPAS39-210ENST00000557466 CHCHD5Q9BSY4 110 aa10.03□□□□□ -0.8
VIPAS39-210ENST00000557466 PPP1R17O96001 155 aa10.02□□□□□ -0.81
VIPAS39-210ENST00000557466 POLR2KP53803 58 aaKnown RBP10.02□□□□□ -0.81
VIPAS39-210ENST00000557466 TMEM136Q6ZRR5 245 aa10.02□□□□□ -0.81
VIPAS39-210ENST00000557466 I3L3M4 83 aa10.01□□□□□ -0.81
VIPAS39-210ENST00000557466 NPYP01303 97 aa10.01□□□□□ -0.81
VIPAS39-210ENST00000557466 BTF3P20290 206 aaKnown RBP10.01□□□□□ -0.81
VIPAS39-210ENST00000557466 PMCHP20382 165 aa10.01□□□□□ -0.81
VIPAS39-210ENST00000557466 AMTP48728 403 aa10.01□□□□□ -0.81
VIPAS39-210ENST00000557466 SUMO2P61956 95 aaKnown RBP10.01□□□□□ -0.81
VIPAS39-210ENST00000557466 GAGE6Q13070 117 aa10.01□□□□□ -0.81
VIPAS39-210ENST00000557466 MPV17L2Q567V2 206 aa10.01□□□□□ -0.81
VIPAS39-210ENST00000557466 ATRAIDQ6UW56 229 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms