RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 ATP6V0E2Q8NHE4 81 aa7.93□□□□□ -1.14
RTN1-208ENST00000557422 SFRP2Q96HF1 295 aa7.93□□□□□ -1.14
RTN1-208ENST00000557422 OSTCQ9NRP0 149 aa7.93□□□□□ -1.14
RTN1-208ENST00000557422 ZFP30Q9Y2G7 519 aa7.93□□□□□ -1.14
RTN1-208ENST00000557422 COX11Q9Y6N1 276 aa7.93□□□□□ -1.14
RTN1-208ENST00000557422 LTAP01374 205 aa7.92□□□□□ -1.14
RTN1-208ENST00000557422 GNG5P63218 68 aa7.92□□□□□ -1.14
RTN1-208ENST00000557422 FAM231DQ6ZW35 169 aa7.92□□□□□ -1.14
RTN1-208ENST00000557422 OR10G8Q8NGN5 311 aa7.92□□□□□ -1.14
RTN1-208ENST00000557422 LENEPQ9Y5L5 61 aa7.92□□□□□ -1.14
RTN1-208ENST00000557422 COLCA2A8K830 154 aa7.91□□□□□ -1.14
RTN1-208ENST00000557422 S100PP25815 95 aa7.91□□□□□ -1.14
RTN1-208ENST00000557422 CFAP126Q5VTH2 177 aa7.91□□□□□ -1.14
RTN1-208ENST00000557422 GOLT1AQ6ZVE7 132 aa7.91□□□□□ -1.14
RTN1-208ENST00000557422 COX8CQ7Z4L0 72 aa7.91□□□□□ -1.14
RTN1-208ENST00000557422 LINC00479Q96M42 142 aa7.91□□□□□ -1.14
RTN1-208ENST00000557422 MLST8Q9BVC4 326 aa7.91□□□□□ -1.14
RTN1-208ENST00000557422 IGHV3-73A0A0B4J1V6 119 aa7.9□□□□□ -1.14
RTN1-208ENST00000557422 TRAV34A0A0B4J273 112 aa7.9□□□□□ -1.14
RTN1-208ENST00000557422 K7EN84 100 aa7.9□□□□□ -1.14
RTN1-208ENST00000557422 CIDEAO60543 219 aa7.9□□□□□ -1.14
RTN1-208ENST00000557422 TYMSP04818 313 aa7.9□□□□□ -1.14
RTN1-208ENST00000557422 FLI1Q01543 452 aaPredicted RBP7.9□□□□□ -1.14
RTN1-208ENST00000557422 ZNF876PQ49A33 203 aa7.9□□□□□ -1.14
RTN1-208ENST00000557422 SAPCD1Q5SSQ6 148 aa7.9□□□□□ -1.14
RTN1-208ENST00000557422 KCNIP4Q6PIL6 250 aa7.9□□□□□ -1.14
RTN1-208ENST00000557422 RMI2Q96E14 147 aa7.9□□□□□ -1.14
RTN1-208ENST00000557422 DNAJC30Q96LL9 226 aa7.9□□□□□ -1.14
RTN1-208ENST00000557422 YPEL4Q96NS1 127 aa7.9□□□□□ -1.14
RTN1-208ENST00000557422 PSG8Q9UQ74 426 aa7.9□□□□□ -1.14
RTN1-208ENST00000557422 LRP2P98164 4655 aa7.89□□□□□ -1.15
RTN1-208ENST00000557422 TRBV24-1A0A075B6N3 115 aa7.89□□□□□ -1.15
RTN1-208ENST00000557422 IGKV2D-24A0A075B6R9 120 aa7.89□□□□□ -1.15
RTN1-208ENST00000557422 TRAV9-1A0A075B6T8 112 aa7.89□□□□□ -1.15
RTN1-208ENST00000557422 TRAV8-1A0A0A6YYK1 113 aa7.89□□□□□ -1.15
RTN1-208ENST00000557422 PGPEP1LA6NFU8 196 aa7.89□□□□□ -1.15
RTN1-208ENST00000557422 ELOBQ15370 118 aa7.89□□□□□ -1.15
RTN1-208ENST00000557422 Q86TA4 180 aa7.89□□□□□ -1.15
RTN1-208ENST00000557422 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.89□□□□□ -1.15
RTN1-208ENST00000557422 RPH3ALQ9UNE2 315 aa7.89□□□□□ -1.15
RTN1-208ENST00000557422 RNF213Q63HN8 5207 aa7.89□□□□□ -1.15
RTN1-208ENST00000557422 TRAV21A0A0B4J279 112 aa7.88□□□□□ -1.15
RTN1-208ENST00000557422 MGST1P10620 155 aaKnown RBP7.88□□□□□ -1.15
RTN1-208ENST00000557422 RPL19P84098 196 aaKnown RBP7.88□□□□□ -1.15
RTN1-208ENST00000557422 CT83Q5H943 113 aa7.88□□□□□ -1.15
RTN1-208ENST00000557422 RAB5AP20339 215 aa7.87□□□□□ -1.15
RTN1-208ENST00000557422 ASIPP42127 132 aa7.87□□□□□ -1.15
RTN1-208ENST00000557422 Q6ZRU5 148 aa7.87□□□□□ -1.15
RTN1-208ENST00000557422 PRNTQ86SH4 94 aa7.87□□□□□ -1.15
RTN1-208ENST00000557422 KCNS1Q96KK3 526 aa7.87□□□□□ -1.15
RTN1-208ENST00000557422 NDFIP1Q9BT67 221 aa7.87□□□□□ -1.15
RTN1-208ENST00000557422 IL36BQ9NZH7 164 aa7.87□□□□□ -1.15
RTN1-208ENST00000557422 V9GYV3 84 aa7.87□□□□□ -1.15
RTN1-208ENST00000557422 TNXBP22105 4242 aa7.86□□□□□ -1.15
RTN1-208ENST00000557422 GATCO43716 136 aaKnown RBP7.86□□□□□ -1.15
RTN1-208ENST00000557422 LINC00694P0DN24 101 aa7.86□□□□□ -1.15
RTN1-208ENST00000557422 Q9UF83 564 aa7.86□□□□□ -1.15
RTN1-208ENST00000557422 C19orf71A6NCJ1 209 aa7.85□□□□□ -1.15
RTN1-208ENST00000557422 FAM231BA6NCW3 169 aa7.85□□□□□ -1.15
RTN1-208ENST00000557422 GAGE12JA6NER3 117 aa7.85□□□□□ -1.15
RTN1-208ENST00000557422 GAGE1Q13065 139 aa7.85□□□□□ -1.15
RTN1-208ENST00000557422 GAGE4Q13068 117 aa7.85□□□□□ -1.15
RTN1-208ENST00000557422 GAGE5Q13069 117 aa7.85□□□□□ -1.15
RTN1-208ENST00000557422 GAGE13Q4V321 117 aa7.85□□□□□ -1.15
RTN1-208ENST00000557422 NUDT10Q8NFP7 164 aa7.85□□□□□ -1.15
RTN1-208ENST00000557422 NUDT11Q96G61 164 aa7.85□□□□□ -1.15
RTN1-208ENST00000557422 SGK494Q96LW2 274 aa7.85□□□□□ -1.15
RTN1-208ENST00000557422 RNASE7Q9H1E1 156 aaKnown RBP7.85□□□□□ -1.15
RTN1-208ENST00000557422 KLK12Q9UKR0 248 aa7.85□□□□□ -1.15
RTN1-208ENST00000557422 URGCP-MRPS24S4R325 110 aa7.85□□□□□ -1.15
RTN1-208ENST00000557422 SMIM27A0A1W2PRY6 76 aa7.84□□□□□ -1.15
RTN1-208ENST00000557422 P01737 135 aa7.84□□□□□ -1.15
RTN1-208ENST00000557422 COX19Q49B96 90 aa7.84□□□□□ -1.15
RTN1-208ENST00000557422 C14orf177Q52M58 125 aa7.84□□□□□ -1.15
RTN1-208ENST00000557422 SMUG1Q53HV7 270 aa7.84□□□□□ -1.15
RTN1-208ENST00000557422 NIT1Q86X76 327 aa7.84□□□□□ -1.15
RTN1-208ENST00000557422 PTH2Q96A98 100 aa7.84□□□□□ -1.15
RTN1-208ENST00000557422 UBE2WQ96B02 151 aa7.84□□□□□ -1.15
RTN1-208ENST00000557422 C9orf85Q96MD7 179 aa7.84□□□□□ -1.15
RTN1-208ENST00000557422 GFRA4Q9GZZ7 299 aa7.84□□□□□ -1.15
RTN1-208ENST00000557422 C11orf21Q9P2W6 132 aa7.84□□□□□ -1.15
RTN1-208ENST00000557422 TGIF2-C20orf24A0A0A6YYL0 155 aa7.83□□□□□ -1.16
RTN1-208ENST00000557422 A8MWL6 223 aa7.83□□□□□ -1.16
RTN1-208ENST00000557422 CXCL1P09341 107 aa7.83□□□□□ -1.16
RTN1-208ENST00000557422 FAM162BQ5T6X4 162 aa7.83□□□□□ -1.16
RTN1-208ENST00000557422 PRR27Q6MZM9 219 aa7.83□□□□□ -1.16
RTN1-208ENST00000557422 TSKUQ8WUA8 353 aa7.83□□□□□ -1.16
RTN1-208ENST00000557422 ZC2HC1AQ96GY0 325 aa7.83□□□□□ -1.16
RTN1-208ENST00000557422 RPP21Q9H633 154 aaKnown RBP7.83□□□□□ -1.16
RTN1-208ENST00000557422 XKRY2A2RUG3 117 aa7.82□□□□□ -1.16
RTN1-208ENST00000557422 C1orf196B1AJZ1 125 aa7.82□□□□□ -1.16
RTN1-208ENST00000557422 RPS10P46783 165 aaKnown RBP7.82□□□□□ -1.16
RTN1-208ENST00000557422 FOXA3P55318 350 aaPredicted RBP7.82□□□□□ -1.16
RTN1-208ENST00000557422 RPS20P60866 119 aaKnown RBP7.82□□□□□ -1.16
RTN1-208ENST00000557422 RAB5BP61020 215 aa7.82□□□□□ -1.16
RTN1-208ENST00000557422 RASL11AQ6T310 242 aa7.82□□□□□ -1.16
RTN1-208ENST00000557422 ZFP2Q6ZN57 461 aa7.82□□□□□ -1.16
RTN1-208ENST00000557422 SAMD10Q9BYL1 202 aa7.82□□□□□ -1.16
RTN1-208ENST00000557422 NAT8BQ9UHF3 227 aa7.82□□□□□ -1.16
RTN1-208ENST00000557422 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms