RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 MUC21A0A0G2JKD1 596 aa10.36□□□□□ -0.75
TUBB3-213ENST00000557262 MUC21A0A140T8X8 626 aa10.36□□□□□ -0.75
TUBB3-213ENST00000557262 KRTAP29-1A8MX34 341 aaPredicted RBP10.36□□□□□ -0.75
TUBB3-213ENST00000557262 CRPP02741 224 aa10.36□□□□□ -0.75
TUBB3-213ENST00000557262 PKIAP61925 76 aa10.36□□□□□ -0.75
TUBB3-213ENST00000557262 MPV17L2Q567V2 206 aa10.36□□□□□ -0.75
TUBB3-213ENST00000557262 TMEM97Q5BJF2 176 aa10.36□□□□□ -0.75
TUBB3-213ENST00000557262 CHCHD5Q9BSY4 110 aa10.36□□□□□ -0.75
TUBB3-213ENST00000557262 KANTRA0A1W2PQU2 76 aa10.35□□□□□ -0.75
TUBB3-213ENST00000557262 ANGP03950 147 aaKnown RBP10.35□□□□□ -0.75
TUBB3-213ENST00000557262 SSTP61278 116 aa10.35□□□□□ -0.75
TUBB3-213ENST00000557262 CIRBP-AS1Q8TBR5 109 aa10.35□□□□□ -0.75
TUBB3-213ENST00000557262 SMIM17P0DL12 118 aa10.34□□□□□ -0.75
TUBB3-213ENST00000557262 EIF5AP63241 154 aaKnown RBP10.34□□□□□ -0.75
TUBB3-213ENST00000557262 NTM-AS1Q6ZSK4 140 aa10.34□□□□□ -0.75
TUBB3-213ENST00000557262 VAX2Q9UIW0 290 aa10.34□□□□□ -0.75
TUBB3-213ENST00000557262 KIF25-AS1Q9Y6Z4 181 aa10.34□□□□□ -0.75
TUBB3-213ENST00000557262 BCL2L11O43521 198 aa10.33□□□□□ -0.76
TUBB3-213ENST00000557262 RPL35P42766 123 aaKnown RBP10.33□□□□□ -0.76
TUBB3-213ENST00000557262 MIAQ16674 131 aa10.33□□□□□ -0.76
TUBB3-213ENST00000557262 DERL1Q9BUN8 251 aa10.32□□□□□ -0.76
TUBB3-213ENST00000557262 USP17L23D6RBM5 183 aa10.31□□□□□ -0.76
TUBB3-213ENST00000557262 KRTAP10-4P60372 401 aaPredicted RBP10.31□□□□□ -0.76
TUBB3-213ENST00000557262 CCL20P78556 96 aa10.31□□□□□ -0.76
TUBB3-213ENST00000557262 AP1S3Q96PC3 154 aa10.31□□□□□ -0.76
TUBB3-213ENST00000557262 MANBALQ9NQG1 85 aa10.31□□□□□ -0.76
TUBB3-213ENST00000557262 PRR34Q9NV39 138 aa10.31□□□□□ -0.76
TUBB3-213ENST00000557262 TRBV25-1A0A075B6N4 114 aa10.3□□□□□ -0.76
TUBB3-213ENST00000557262 IGLV2-8P01709 118 aa10.3□□□□□ -0.76
TUBB3-213ENST00000557262 HLA-DQA1P01909 254 aa10.3□□□□□ -0.76
TUBB3-213ENST00000557262 RBX1P62877 108 aa10.3□□□□□ -0.76
TUBB3-213ENST00000557262 GAGE6Q13070 117 aa10.3□□□□□ -0.76
TUBB3-213ENST00000557262 DGAT2L7PQ6IED9 249 aa10.3□□□□□ -0.76
TUBB3-213ENST00000557262 C11orf52Q96A22 123 aa10.3□□□□□ -0.76
TUBB3-213ENST00000557262 DAZAP1Q96EP5 407 aaKnown RBP10.3□□□□□ -0.76
TUBB3-213ENST00000557262 GNG13Q9P2W3 67 aa10.3□□□□□ -0.76
TUBB3-213ENST00000557262 TRAV1-1A0A0B4J248 108 aa10.29□□□□□ -0.76
TUBB3-213ENST00000557262 M0QY20 66 aa10.29□□□□□ -0.76
TUBB3-213ENST00000557262 PRSS1P07477 247 aa10.29□□□□□ -0.76
TUBB3-213ENST00000557262 IGLC6P0CF74 106 aa10.29□□□□□ -0.76
TUBB3-213ENST00000557262 RPS20P60866 119 aaKnown RBP10.29□□□□□ -0.76
TUBB3-213ENST00000557262 LINC00269Q8N2A0 174 aa10.29□□□□□ -0.76
TUBB3-213ENST00000557262 H7C1H1 209 aa10.28□□□□□ -0.76
TUBB3-213ENST00000557262 GZMBP10144 247 aa10.28□□□□□ -0.76
TUBB3-213ENST00000557262 IQCJQ1A5X6 159 aa10.28□□□□□ -0.76
TUBB3-213ENST00000557262 FER1L6-AS1Q8NA97 138 aa10.28□□□□□ -0.76
TUBB3-213ENST00000557262 OR2D3Q8NGH3 330 aa10.28□□□□□ -0.76
TUBB3-213ENST00000557262 TPPP3Q9BW30 176 aa10.28□□□□□ -0.76
TUBB3-213ENST00000557262 IGHV1-24A0A0C4DH33 117 aa10.27□□□□□ -0.77
TUBB3-213ENST00000557262 MGPP08493 103 aa10.27□□□□□ -0.77
TUBB3-213ENST00000557262 RAB5CP51148 216 aa10.27□□□□□ -0.77
TUBB3-213ENST00000557262 CACNG7P62955 275 aa10.27□□□□□ -0.77
TUBB3-213ENST00000557262 CENPWQ5EE01 88 aa10.27□□□□□ -0.77
TUBB3-213ENST00000557262 KRTAP26-1Q6PEX3 210 aa10.27□□□□□ -0.77
TUBB3-213ENST00000557262 C9orf163Q8N9P6 203 aa10.27□□□□□ -0.77
TUBB3-213ENST00000557262 RAB19A4D1S5 217 aa10.26□□□□□ -0.77
TUBB3-213ENST00000557262 C19orf71A6NCJ1 209 aa10.26□□□□□ -0.77
TUBB3-213ENST00000557262 F2Z2F3 143 aa10.26□□□□□ -0.77
TUBB3-213ENST00000557262 TEX46H3BTG2 121 aa10.26□□□□□ -0.77
TUBB3-213ENST00000557262 OXTP01178 125 aa10.26□□□□□ -0.77
TUBB3-213ENST00000557262 CLPSL2Q6UWE3 100 aa10.26□□□□□ -0.77
TUBB3-213ENST00000557262 SMIM12Q96EX1 92 aa10.26□□□□□ -0.77
TUBB3-213ENST00000557262 LRP1Q07954 4544 aaKnown RBP10.26□□□□□ -0.77
TUBB3-213ENST00000557262 XKRY2A2RUG3 117 aa10.25□□□□□ -0.77
TUBB3-213ENST00000557262 GNG4P50150 75 aa10.25□□□□□ -0.77
TUBB3-213ENST00000557262 REG3AQ06141 175 aa10.25□□□□□ -0.77
TUBB3-213ENST00000557262 SUMO4Q6EEV6 95 aa10.25□□□□□ -0.77
TUBB3-213ENST00000557262 EIF5AL1Q6IS14 154 aaKnown RBP10.25□□□□□ -0.77
TUBB3-213ENST00000557262 CLRN3Q8NCR9 226 aa10.25□□□□□ -0.77
TUBB3-213ENST00000557262 A0A1B0GUV1 79 aa10.24□□□□□ -0.77
TUBB3-213ENST00000557262 P01737 135 aa10.24□□□□□ -0.77
TUBB3-213ENST00000557262 NKX2-5P52952 324 aaPredicted RBP10.24□□□□□ -0.77
TUBB3-213ENST00000557262 RASL11AQ6T310 242 aa10.24□□□□□ -0.77
TUBB3-213ENST00000557262 TRAV8-4A0A0B4J246 113 aa10.23□□□□□ -0.77
TUBB3-213ENST00000557262 PDE6DO43924 150 aa10.23□□□□□ -0.77
TUBB3-213ENST00000557262 IFNA1P01562 189 aa10.23□□□□□ -0.77
TUBB3-213ENST00000557262 TRGC1P0CF51 173 aa10.23□□□□□ -0.77
TUBB3-213ENST00000557262 NTF3P20783 257 aa10.23□□□□□ -0.77
TUBB3-213ENST00000557262 RPL37AP61513 92 aaKnown RBP10.23□□□□□ -0.77
TUBB3-213ENST00000557262 MEF2BQ02080 365 aaPredicted RBP10.23□□□□□ -0.77
TUBB3-213ENST00000557262 SERTAD4-AS1Q5TG53 156 aa10.23□□□□□ -0.77
TUBB3-213ENST00000557262 LYZL1Q6UWQ5 148 aa10.23□□□□□ -0.77
TUBB3-213ENST00000557262 C20orf203Q8NBC4 194 aa10.23□□□□□ -0.77
TUBB3-213ENST00000557262 TMEM243Q9BU79 118 aa10.23□□□□□ -0.77
TUBB3-213ENST00000557262 NIT2Q9NQR4 276 aa10.23□□□□□ -0.77
TUBB3-213ENST00000557262 BIN3Q9NQY0 253 aa10.23□□□□□ -0.77
TUBB3-213ENST00000557262 MED9Q9NWA0 146 aa10.23□□□□□ -0.77
TUBB3-213ENST00000557262 FAT3Q8TDW7 4589 aa10.22□□□□□ -0.77
TUBB3-213ENST00000557262 IGLV10-54A0A075B6I4 117 aa10.22□□□□□ -0.77
TUBB3-213ENST00000557262 SULT1A2P50226 295 aa10.22□□□□□ -0.77
TUBB3-213ENST00000557262 SDIM1Q6ZPB5 146 aa10.22□□□□□ -0.77
TUBB3-213ENST00000557262 DPH3P1Q9H4G8 78 aa10.22□□□□□ -0.77
TUBB3-213ENST00000557262 PKHD1L1Q86WI1 4243 aa10.22□□□□□ -0.77
TUBB3-213ENST00000557262 WDR73Q6P4I2 378 aa10.21□□□□□ -0.77
TUBB3-213ENST00000557262 C9orf62Q8N4C0 152 aa10.21□□□□□ -0.77
TUBB3-213ENST00000557262 PGLYRP4Q96LB8 373 aa10.21□□□□□ -0.77
TUBB3-213ENST00000557262 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.21□□□□□ -0.77
TUBB3-213ENST00000557262 TRBV20OR9-2A0A075B6H5 130 aa10.2□□□□□ -0.78
TUBB3-213ENST00000557262 IGLV4-60A0A075B6I1 120 aa10.2□□□□□ -0.78
TUBB3-213ENST00000557262 NUDT10Q8NFP7 164 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms