RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 SVBPQ8N300 66 aa9.4□□□□□ -0.9
VRTN-202ENST00000557177 UBE2WQ96B02 151 aa9.4□□□□□ -0.9
VRTN-202ENST00000557177 NKX6-2Q9C056 277 aaPredicted RBP9.4□□□□□ -0.9
VRTN-202ENST00000557177 MANBALQ9NQG1 85 aa9.4□□□□□ -0.9
VRTN-202ENST00000557177 ZFP30Q9Y2G7 519 aa9.4□□□□□ -0.9
VRTN-202ENST00000557177 A0A087WX48 190 aa9.39□□□□□ -0.91
VRTN-202ENST00000557177 F8W036 122 aa9.39□□□□□ -0.91
VRTN-202ENST00000557177 BCL2P10415 239 aa9.39□□□□□ -0.91
VRTN-202ENST00000557177 UBE2D3P61077 147 aa9.39□□□□□ -0.91
VRTN-202ENST00000557177 UBE2D2P62837 147 aa9.39□□□□□ -0.91
VRTN-202ENST00000557177 ELOBQ15370 118 aa9.39□□□□□ -0.91
VRTN-202ENST00000557177 ZNF674Q2M3X9 581 aa9.39□□□□□ -0.91
VRTN-202ENST00000557177 LINC01559Q495D7 138 aa9.39□□□□□ -0.91
VRTN-202ENST00000557177 FAM162BQ5T6X4 162 aa9.39□□□□□ -0.91
VRTN-202ENST00000557177 EIF5A2Q9GZV4 153 aaKnown RBP9.39□□□□□ -0.91
VRTN-202ENST00000557177 PHLDA3Q9Y5J5 127 aa9.39□□□□□ -0.91
VRTN-202ENST00000557177 UBR4Q5T4S7 5183 aa9.38□□□□□ -0.91
VRTN-202ENST00000557177 TRBV7-3A0A075B6L6 115 aa9.38□□□□□ -0.91
VRTN-202ENST00000557177 C9JQL5 133 aa9.38□□□□□ -0.91
VRTN-202ENST00000557177 M0R381 172 aa9.38□□□□□ -0.91
VRTN-202ENST00000557177 OXTP01178 125 aa9.38□□□□□ -0.91
VRTN-202ENST00000557177 IGLV2-8P01709 118 aa9.38□□□□□ -0.91
VRTN-202ENST00000557177 SERTAD4-AS1Q5TG53 156 aa9.38□□□□□ -0.91
VRTN-202ENST00000557177 VAX2Q9UIW0 290 aa9.38□□□□□ -0.91
VRTN-202ENST00000557177 SNAPINO95295 136 aa9.37□□□□□ -0.91
VRTN-202ENST00000557177 APOC3P02656 99 aa9.37□□□□□ -0.91
VRTN-202ENST00000557177 SRP19P09132 144 aaKnown RBP9.37□□□□□ -0.91
VRTN-202ENST00000557177 RPL36AP83881 106 aaKnown RBP9.37□□□□□ -0.91
VRTN-202ENST00000557177 Q0VG73 95 aa9.37□□□□□ -0.91
VRTN-202ENST00000557177 ZFP82Q8N141 532 aa9.37□□□□□ -0.91
VRTN-202ENST00000557177 OR10G8Q8NGN5 311 aa9.37□□□□□ -0.91
VRTN-202ENST00000557177 RPL36ALQ969Q0 106 aaKnown RBP9.37□□□□□ -0.91
VRTN-202ENST00000557177 FMC1Q96HJ9 113 aa9.37□□□□□ -0.91
VRTN-202ENST00000557177 TMSB15BA0A087X1C1 80 aa9.36□□□□□ -0.91
VRTN-202ENST00000557177 TRBV6-1A0A0K0K1D8 114 aa9.36□□□□□ -0.91
VRTN-202ENST00000557177 LTAP01374 205 aa9.36□□□□□ -0.91
VRTN-202ENST00000557177 C14orf177Q52M58 125 aa9.36□□□□□ -0.91
VRTN-202ENST00000557177 KCNIP4Q6PIL6 250 aa9.36□□□□□ -0.91
VRTN-202ENST00000557177 ENHOQ6UWT2 76 aa9.36□□□□□ -0.91
VRTN-202ENST00000557177 C1orf43Q9BWL3 253 aa9.36□□□□□ -0.91
VRTN-202ENST00000557177 GNG13Q9P2W3 67 aa9.36□□□□□ -0.91
VRTN-202ENST00000557177 TRBV6-8A0A0A6YYG3 113 aa9.35□□□□□ -0.91
VRTN-202ENST00000557177 TMEM250H0YL14 139 aa9.35□□□□□ -0.91
VRTN-202ENST00000557177 UBE2G1P62253 170 aa9.35□□□□□ -0.91
VRTN-202ENST00000557177 TCEAL7Q9BRU2 100 aa9.35□□□□□ -0.91
VRTN-202ENST00000557177 A0A1B0GV50 99 aa9.34□□□□□ -0.91
VRTN-202ENST00000557177 MEF2BQ02080 365 aaPredicted RBP9.34□□□□□ -0.91
VRTN-202ENST00000557177 MPV17L2Q567V2 206 aa9.34□□□□□ -0.91
VRTN-202ENST00000557177 PRR27Q6MZM9 219 aa9.34□□□□□ -0.91
VRTN-202ENST00000557177 TMEM262E9PQX1 116 aa9.33□□□□□ -0.92
VRTN-202ENST00000557177 RAB4BP61018 213 aa9.33□□□□□ -0.92
VRTN-202ENST00000557177 FAM74A3Q4VXF1 159 aa9.33□□□□□ -0.92
VRTN-202ENST00000557177 NEXN-AS1Q8NBZ9 246 aa9.33□□□□□ -0.92
VRTN-202ENST00000557177 CLRN3Q8NCR9 226 aa9.33□□□□□ -0.92
VRTN-202ENST00000557177 PDE6DO43924 150 aa9.32□□□□□ -0.92
VRTN-202ENST00000557177 CRPP02741 224 aa9.32□□□□□ -0.92
VRTN-202ENST00000557177 RHEBQ15382 184 aa9.32□□□□□ -0.92
VRTN-202ENST00000557177 C15orf54Q8N8G6 183 aa9.32□□□□□ -0.92
VRTN-202ENST00000557177 USP17L23D6RBM5 183 aa9.31□□□□□ -0.92
VRTN-202ENST00000557177 CXCL1P09341 107 aa9.31□□□□□ -0.92
VRTN-202ENST00000557177 PNRC1Q12796 327 aaPredicted RBP9.31□□□□□ -0.92
VRTN-202ENST00000557177 ZNF56Q15929 161 aa9.31□□□□□ -0.92
VRTN-202ENST00000557177 OR10AG1Q8NH19 301 aa9.31□□□□□ -0.92
VRTN-202ENST00000557177 ANGP03950 147 aaKnown RBP9.3□□□□□ -0.92
VRTN-202ENST00000557177 PRSS1P07477 247 aa9.3□□□□□ -0.92
VRTN-202ENST00000557177 AKR1C3P42330 323 aa9.3□□□□□ -0.92
VRTN-202ENST00000557177 RPL37AP61513 92 aaKnown RBP9.3□□□□□ -0.92
VRTN-202ENST00000557177 MIAQ16674 131 aa9.3□□□□□ -0.92
VRTN-202ENST00000557177 CST9LP1Q5W188 147 aa9.3□□□□□ -0.92
VRTN-202ENST00000557177 SNAI2O43623 268 aa9.29□□□□□ -0.92
VRTN-202ENST00000557177 PAGE4O60829 102 aa9.29□□□□□ -0.92
VRTN-202ENST00000557177 HLA-DQA1P01909 254 aa9.29□□□□□ -0.92
VRTN-202ENST00000557177 HNRNPA3P51991 378 aaKnown RBP9.29□□□□□ -0.92
VRTN-202ENST00000557177 PKIAP61925 76 aa9.29□□□□□ -0.92
VRTN-202ENST00000557177 RPL19P84098 196 aaKnown RBP9.29□□□□□ -0.92
VRTN-202ENST00000557177 DGAT2L7PQ6IED9 249 aa9.29□□□□□ -0.92
VRTN-202ENST00000557177 NTM-AS1Q6ZSK4 140 aa9.29□□□□□ -0.92
VRTN-202ENST00000557177 C9orf163Q8N9P6 203 aa9.29□□□□□ -0.92
VRTN-202ENST00000557177 C11orf52Q96A22 123 aa9.29□□□□□ -0.92
VRTN-202ENST00000557177 DAZAP1Q96EP5 407 aaKnown RBP9.29□□□□□ -0.92
VRTN-202ENST00000557177 CHCHD5Q9BSY4 110 aa9.29□□□□□ -0.92
VRTN-202ENST00000557177 MLST8Q9BVC4 326 aa9.29□□□□□ -0.92
VRTN-202ENST00000557177 SSBP4Q9BWG4 385 aaPredicted RBP9.29□□□□□ -0.92
VRTN-202ENST00000557177 PRR34Q9NV39 138 aa9.29□□□□□ -0.92
VRTN-202ENST00000557177 SCO1O75880 301 aa9.28□□□□□ -0.92
VRTN-202ENST00000557177 KRTAP26-1Q6PEX3 210 aa9.28□□□□□ -0.92
VRTN-202ENST00000557177 PLA2G2DQ9UNK4 145 aa9.28□□□□□ -0.92
VRTN-202ENST00000557177 OR5AL1P0C617 328 aa9.27□□□□□ -0.93
VRTN-202ENST00000557177 TMEM97Q5BJF2 176 aa9.27□□□□□ -0.93
VRTN-202ENST00000557177 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.27□□□□□ -0.93
VRTN-202ENST00000557177 KIF25-AS1Q9Y6Z4 181 aa9.27□□□□□ -0.93
VRTN-202ENST00000557177 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.27□□□□□ -0.93
VRTN-202ENST00000557177 C7orf77A4D0Y5 90 aa9.26□□□□□ -0.93
VRTN-202ENST00000557177 PANO1I0J062 215 aa9.26□□□□□ -0.93
VRTN-202ENST00000557177 S100A9P06702 114 aaKnown RBP9.26□□□□□ -0.93
VRTN-202ENST00000557177 RBX1P62877 108 aa9.26□□□□□ -0.93
VRTN-202ENST00000557177 SMCO4Q9NRQ5 59 aa9.26□□□□□ -0.93
VRTN-202ENST00000557177 NAT8Q9UHE5 227 aa9.26□□□□□ -0.93
VRTN-202ENST00000557177 MUC21A0A0G2JKD1 596 aa9.25□□□□□ -0.93
VRTN-202ENST00000557177 MUC21A0A140T8X8 626 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms