RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 RAB4BP61018 213 aa4.77□□□□□ -1.65
PCNX1-213ENST00000556846 RPL19P84098 196 aaKnown RBP4.77□□□□□ -1.65
PCNX1-213ENST00000556846 NIT1Q86X76 327 aa4.77□□□□□ -1.65
PCNX1-213ENST00000556846 UBE2WQ96B02 151 aa4.77□□□□□ -1.65
PCNX1-213ENST00000556846 TMEM70Q9BUB7 260 aa4.77□□□□□ -1.65
PCNX1-213ENST00000556846 DYNC1H1Q14204 4646 aaKnown RBP4.76□□□□□ -1.65
PCNX1-213ENST00000556846 TEX46H3BTG2 121 aa4.76□□□□□ -1.65
PCNX1-213ENST00000556846 Q8N976 141 aa4.76□□□□□ -1.65
PCNX1-213ENST00000556846 OR10AG1Q8NH19 301 aa4.76□□□□□ -1.65
PCNX1-213ENST00000556846 DAZAP1Q96EP5 407 aaKnown RBP4.76□□□□□ -1.65
PCNX1-213ENST00000556846 TPPP3Q9BW30 176 aa4.76□□□□□ -1.65
PCNX1-213ENST00000556846 GNG13Q9P2W3 67 aa4.76□□□□□ -1.65
PCNX1-213ENST00000556846 TRBV6-8A0A0A6YYG3 113 aa4.75□□□□□ -1.65
PCNX1-213ENST00000556846 CRPP02741 224 aa4.75□□□□□ -1.65
PCNX1-213ENST00000556846 RPL35P42766 123 aaKnown RBP4.75□□□□□ -1.65
PCNX1-213ENST00000556846 UBE2D3P61077 147 aa4.75□□□□□ -1.65
PCNX1-213ENST00000556846 UBE2D2P62837 147 aa4.75□□□□□ -1.65
PCNX1-213ENST00000556846 Q0VG73 95 aa4.75□□□□□ -1.65
PCNX1-213ENST00000556846 WFDC2Q14508 124 aa4.75□□□□□ -1.65
PCNX1-213ENST00000556846 EIF5AL1Q6IS14 154 aaKnown RBP4.75□□□□□ -1.65
PCNX1-213ENST00000556846 CHCHD5Q9BSY4 110 aa4.75□□□□□ -1.65
PCNX1-213ENST00000556846 CHCHD7Q9BUK0 85 aa4.75□□□□□ -1.65
PCNX1-213ENST00000556846 MANBALQ9NQG1 85 aa4.75□□□□□ -1.65
PCNX1-213ENST00000556846 FAM30AQ9NZY2 134 aa4.75□□□□□ -1.65
PCNX1-213ENST00000556846 C1QBP02746 253 aa4.74□□□□□ -1.65
PCNX1-213ENST00000556846 ANGP03950 147 aaKnown RBP4.74□□□□□ -1.65
PCNX1-213ENST00000556846 OR5AL1P0C617 328 aa4.74□□□□□ -1.65
PCNX1-213ENST00000556846 RAB5CP51148 216 aa4.74□□□□□ -1.65
PCNX1-213ENST00000556846 CCL20P78556 96 aa4.74□□□□□ -1.65
PCNX1-213ENST00000556846 LINC01620Q4KN68 170 aa4.74□□□□□ -1.65
PCNX1-213ENST00000556846 C15orf54Q8N8G6 183 aa4.74□□□□□ -1.65
PCNX1-213ENST00000556846 NEXN-AS1Q8NBZ9 246 aa4.74□□□□□ -1.65
PCNX1-213ENST00000556846 OR10G8Q8NGN5 311 aa4.74□□□□□ -1.65
PCNX1-213ENST00000556846 DNAJC30Q96LL9 226 aa4.74□□□□□ -1.65
PCNX1-213ENST00000556846 MLST8Q9BVC4 326 aa4.74□□□□□ -1.65
PCNX1-213ENST00000556846 C1orf43Q9BWL3 253 aa4.74□□□□□ -1.65
PCNX1-213ENST00000556846 RYR1P21817 5038 aa4.74□□□□□ -1.65
PCNX1-213ENST00000556846 PKHD1P08F94 4074 aa4.74□□□□□ -1.65
PCNX1-213ENST00000556846 XKRY2A2RUG3 117 aa4.73□□□□□ -1.65
PCNX1-213ENST00000556846 SNAI2O43623 268 aa4.73□□□□□ -1.65
PCNX1-213ENST00000556846 IFNA1P01562 189 aa4.73□□□□□ -1.65
PCNX1-213ENST00000556846 PLA2G1BP04054 148 aaKnown RBP4.73□□□□□ -1.65
PCNX1-213ENST00000556846 MGPP08493 103 aa4.73□□□□□ -1.65
PCNX1-213ENST00000556846 CXCL1P09341 107 aa4.73□□□□□ -1.65
PCNX1-213ENST00000556846 GZMBP10144 247 aa4.73□□□□□ -1.65
PCNX1-213ENST00000556846 GNG4P50150 75 aa4.73□□□□□ -1.65
PCNX1-213ENST00000556846 RPS20P60866 119 aaKnown RBP4.73□□□□□ -1.65
PCNX1-213ENST00000556846 PKIAP61925 76 aa4.73□□□□□ -1.65
PCNX1-213ENST00000556846 TMEM97Q5BJF2 176 aa4.73□□□□□ -1.65
PCNX1-213ENST00000556846 CENPWQ5EE01 88 aa4.73□□□□□ -1.65
PCNX1-213ENST00000556846 FER1L6-AS1Q8NA97 138 aa4.73□□□□□ -1.65
PCNX1-213ENST00000556846 OR2D3Q8NGH3 330 aa4.73□□□□□ -1.65
PCNX1-213ENST00000556846 AP1S3Q96PC3 154 aa4.73□□□□□ -1.65
PCNX1-213ENST00000556846 DERL1Q9BUN8 251 aa4.73□□□□□ -1.65
PCNX1-213ENST00000556846 MED9Q9NWA0 146 aa4.73□□□□□ -1.65
PCNX1-213ENST00000556846 ABCA13Q86UQ4 5058 aa4.72□□□□□ -1.65
PCNX1-213ENST00000556846 TRAV1-1A0A0B4J248 108 aa4.72□□□□□ -1.65
PCNX1-213ENST00000556846 RAB19A4D1S5 217 aa4.72□□□□□ -1.65
PCNX1-213ENST00000556846 H7C1H1 209 aa4.72□□□□□ -1.65
PCNX1-213ENST00000556846 P01737 135 aa4.72□□□□□ -1.65
PCNX1-213ENST00000556846 CACNG7P62955 275 aa4.72□□□□□ -1.65
PCNX1-213ENST00000556846 GAGE6Q13070 117 aa4.72□□□□□ -1.65
PCNX1-213ENST00000556846 C14orf177Q52M58 125 aa4.72□□□□□ -1.65
PCNX1-213ENST00000556846 MPV17L2Q567V2 206 aa4.72□□□□□ -1.65
PCNX1-213ENST00000556846 ENHOQ6UWT2 76 aa4.72□□□□□ -1.65
PCNX1-213ENST00000556846 BIN3Q9NQY0 253 aa4.72□□□□□ -1.65
PCNX1-213ENST00000556846 TRBV25-1A0A075B6N4 114 aa4.71□□□□□ -1.66
PCNX1-213ENST00000556846 F2Z2F3 143 aa4.71□□□□□ -1.66
PCNX1-213ENST00000556846 PDE6DO43924 150 aa4.71□□□□□ -1.66
PCNX1-213ENST00000556846 HLA-DQA1P01909 254 aa4.71□□□□□ -1.66
PCNX1-213ENST00000556846 SULT1A2P50226 295 aa4.71□□□□□ -1.66
PCNX1-213ENST00000556846 SRSF3P84103 164 aaKnown RBP4.71□□□□□ -1.66
PCNX1-213ENST00000556846 MEF2BQ02080 365 aaPredicted RBP4.71□□□□□ -1.66
PCNX1-213ENST00000556846 ATRAIDQ6UW56 229 aa4.71□□□□□ -1.66
PCNX1-213ENST00000556846 C11orf52Q96A22 123 aa4.71□□□□□ -1.66
PCNX1-213ENST00000556846 IGHV1-24A0A0C4DH33 117 aa4.7□□□□□ -1.66
PCNX1-213ENST00000556846 M0QY20 66 aa4.7□□□□□ -1.66
PCNX1-213ENST00000556846 TRGC1P0CF51 173 aa4.7□□□□□ -1.66
PCNX1-213ENST00000556846 NKX2-5P52952 324 aaPredicted RBP4.7□□□□□ -1.66
PCNX1-213ENST00000556846 RBX1P62877 108 aa4.7□□□□□ -1.66
PCNX1-213ENST00000556846 MIAQ16674 131 aa4.7□□□□□ -1.66
PCNX1-213ENST00000556846 CLPSL2Q6UWE3 100 aa4.7□□□□□ -1.66
PCNX1-213ENST00000556846 LYZL1Q6UWQ5 148 aa4.7□□□□□ -1.66
PCNX1-213ENST00000556846 NTM-AS1Q6ZSK4 140 aa4.7□□□□□ -1.66
PCNX1-213ENST00000556846 SCXQ7RTU7 201 aa4.7□□□□□ -1.66
PCNX1-213ENST00000556846 LINC00269Q8N2A0 174 aa4.7□□□□□ -1.66
PCNX1-213ENST00000556846 SMIM12Q96EX1 92 aa4.7□□□□□ -1.66
PCNX1-213ENST00000556846 VAX2Q9UIW0 290 aa4.7□□□□□ -1.66
PCNX1-213ENST00000556846 KIF25-AS1Q9Y6Z4 181 aa4.7□□□□□ -1.66
PCNX1-213ENST00000556846 C19orf71A6NCJ1 209 aa4.69□□□□□ -1.66
PCNX1-213ENST00000556846 USP17L23D6RBM5 183 aa4.69□□□□□ -1.66
PCNX1-213ENST00000556846 UBE2L6O14933 153 aa4.69□□□□□ -1.66
PCNX1-213ENST00000556846 IGLV2-8P01709 118 aa4.69□□□□□ -1.66
PCNX1-213ENST00000556846 IGLC6P0CF74 106 aa4.69□□□□□ -1.66
PCNX1-213ENST00000556846 BCL2P10415 239 aa4.69□□□□□ -1.66
PCNX1-213ENST00000556846 NTF3P20783 257 aa4.69□□□□□ -1.66
PCNX1-213ENST00000556846 TAGLN2P37802 199 aaKnown RBP4.69□□□□□ -1.66
PCNX1-213ENST00000556846 TWIST1Q15672 202 aa4.69□□□□□ -1.66
PCNX1-213ENST00000556846 SUMO4Q6EEV6 95 aa4.69□□□□□ -1.66
PCNX1-213ENST00000556846 RASL11AQ6T310 242 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 265 ms