RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 CXorf1O96002 111 aa6.56□□□□□ -1.36
SCFD1-220ENST00000556486 ASIPP42127 132 aa6.56□□□□□ -1.36
SCFD1-220ENST00000556486 DNLZQ5SXM8 178 aa6.56□□□□□ -1.36
SCFD1-220ENST00000556486 COX8CQ7Z4L0 72 aa6.56□□□□□ -1.36
SCFD1-220ENST00000556486 IL36BQ9NZH7 164 aa6.56□□□□□ -1.36
SCFD1-220ENST00000556486 FGF8P55075 233 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-220ENST00000556486 DEFA1P59665 94 aa6.55□□□□□ -1.36
SCFD1-220ENST00000556486 DEFA3P59666 94 aa6.55□□□□□ -1.36
SCFD1-220ENST00000556486 MAJINQ3KP22 176 aa6.55□□□□□ -1.36
SCFD1-220ENST00000556486 TPPP3Q9BW30 176 aa6.55□□□□□ -1.36
SCFD1-220ENST00000556486 TNFSF18Q9UNG2 199 aa6.55□□□□□ -1.36
SCFD1-220ENST00000556486 FABP5P3A8MUU1 101 aa6.54□□□□□ -1.36
SCFD1-220ENST00000556486 SEC11BP0C7V7 166 aa6.54□□□□□ -1.36
SCFD1-220ENST00000556486 ATP6V0CP27449 155 aa6.54□□□□□ -1.36
SCFD1-220ENST00000556486 RPL24P83731 157 aaKnown RBP6.54□□□□□ -1.36
SCFD1-220ENST00000556486 ATRAIDQ6UW56 229 aa6.54□□□□□ -1.36
SCFD1-220ENST00000556486 DAZ4Q86SG3 579 aaKnown RBP6.54□□□□□ -1.36
SCFD1-220ENST00000556486 PRNTQ86SH4 94 aa6.54□□□□□ -1.36
SCFD1-220ENST00000556486 HSD17B11Q8NBQ5 300 aa6.54□□□□□ -1.36
SCFD1-220ENST00000556486 CHCHD7Q9BUK0 85 aa6.54□□□□□ -1.36
SCFD1-220ENST00000556486 DAZ3Q9NR90 486 aaKnown RBP6.54□□□□□ -1.36
SCFD1-220ENST00000556486 RNF222A6NCQ9 220 aa6.53□□□□□ -1.36
SCFD1-220ENST00000556486 GAGE5Q13069 117 aa6.53□□□□□ -1.36
SCFD1-220ENST00000556486 NIT1Q86X76 327 aa6.53□□□□□ -1.36
SCFD1-220ENST00000556486 Q8N976 141 aa6.53□□□□□ -1.36
SCFD1-220ENST00000556486 CIRBP-AS1Q8TBR5 109 aa6.53□□□□□ -1.36
SCFD1-220ENST00000556486 RMI2Q96E14 147 aa6.53□□□□□ -1.36
SCFD1-220ENST00000556486 NKX6-2Q9C056 277 aaPredicted RBP6.53□□□□□ -1.36
SCFD1-220ENST00000556486 ACTR3CQ9C0K3 210 aaPredicted RBP6.53□□□□□ -1.36
SCFD1-220ENST00000556486 Q9UF83 564 aa6.53□□□□□ -1.36
SCFD1-220ENST00000556486 ARL2-SNX15V9GYD0 113 aa6.53□□□□□ -1.36
SCFD1-220ENST00000556486 TRBV10-1A0A0K0K1A3 114 aa6.52□□□□□ -1.37
SCFD1-220ENST00000556486 PRSS2P07478 247 aa6.52□□□□□ -1.37
SCFD1-220ENST00000556486 S100A4P26447 101 aaKnown RBP6.52□□□□□ -1.37
SCFD1-220ENST00000556486 C14orf178Q8N769 122 aaPredicted RBP6.52□□□□□ -1.37
SCFD1-220ENST00000556486 HIST1H2BAQ96A08 127 aa6.52□□□□□ -1.37
SCFD1-220ENST00000556486 CHAC1Q9BUX1 264 aa6.52□□□□□ -1.37
SCFD1-220ENST00000556486 SAMD10Q9BYL1 202 aa6.52□□□□□ -1.37
SCFD1-220ENST00000556486 KRBOX1C9JBD0 128 aa6.51□□□□□ -1.37
SCFD1-220ENST00000556486 MT1HL1P0DM35 61 aa6.51□□□□□ -1.37
SCFD1-220ENST00000556486 CRIP1P50238 77 aa6.51□□□□□ -1.37
SCFD1-220ENST00000556486 HERV-K104P63124 156 aa6.51□□□□□ -1.37
SCFD1-220ENST00000556486 ZNF726P1Q15940 193 aa6.51□□□□□ -1.37
SCFD1-220ENST00000556486 LGALSLQ3ZCW2 172 aaPredicted RBP6.51□□□□□ -1.37
SCFD1-220ENST00000556486 Q86TA4 180 aa6.51□□□□□ -1.37
SCFD1-220ENST00000556486 NRACQ8N912 160 aa6.51□□□□□ -1.37
SCFD1-220ENST00000556486 OR2T35Q8NGX2 323 aa6.51□□□□□ -1.37
SCFD1-220ENST00000556486 BAALCQ8WXS3 180 aa6.51□□□□□ -1.37
SCFD1-220ENST00000556486 SFRP2Q96HF1 295 aa6.51□□□□□ -1.37
SCFD1-220ENST00000556486 JPT2Q9H910 190 aa6.51□□□□□ -1.37
SCFD1-220ENST00000556486 ZFP30Q9Y2G7 519 aa6.51□□□□□ -1.37
SCFD1-220ENST00000556486 TRBV6-1A0A0K0K1D8 114 aa6.5□□□□□ -1.37
SCFD1-220ENST00000556486 CTXND1A0A1B0GTU2 59 aa6.5□□□□□ -1.37
SCFD1-220ENST00000556486 B4DEV8 164 aa6.5□□□□□ -1.37
SCFD1-220ENST00000556486 PEX7O00628 323 aa6.5□□□□□ -1.37
SCFD1-220ENST00000556486 ARMS2P0C7Q2 107 aa6.5□□□□□ -1.37
SCFD1-220ENST00000556486 RPL37AP61513 92 aaKnown RBP6.5□□□□□ -1.37
SCFD1-220ENST00000556486 ELOBQ15370 118 aa6.5□□□□□ -1.37
SCFD1-220ENST00000556486 OR10G8Q8NGN5 311 aa6.5□□□□□ -1.37
SCFD1-220ENST00000556486 TCEAL7Q9BRU2 100 aa6.5□□□□□ -1.37
SCFD1-220ENST00000556486 ALG5Q9Y673 324 aa6.5□□□□□ -1.37
SCFD1-220ENST00000556486 URGCP-MRPS24S4R325 110 aa6.5□□□□□ -1.37
SCFD1-220ENST00000556486 RBFOX3A6NFN3 312 aa6.49□□□□□ -1.37
SCFD1-220ENST00000556486 FAM74A7A6NL05 159 aa6.49□□□□□ -1.37
SCFD1-220ENST00000556486 H3BVH4 76 aa6.49□□□□□ -1.37
SCFD1-220ENST00000556486 IFNA7P01567 189 aa6.49□□□□□ -1.37
SCFD1-220ENST00000556486 FAM162BQ5T6X4 162 aa6.49□□□□□ -1.37
SCFD1-220ENST00000556486 ZC2HC1AQ96GY0 325 aa6.49□□□□□ -1.37
SCFD1-220ENST00000556486 TRBV7-3A0A075B6L6 115 aa6.48□□□□□ -1.37
SCFD1-220ENST00000556486 IGKV2D-24A0A075B6R9 120 aa6.48□□□□□ -1.37
SCFD1-220ENST00000556486 A0A087WX48 190 aa6.48□□□□□ -1.37
SCFD1-220ENST00000556486 SH2D1AO60880 128 aa6.48□□□□□ -1.37
SCFD1-220ENST00000556486 PTTG1O95997 202 aa6.48□□□□□ -1.37
SCFD1-220ENST00000556486 GIPP09681 153 aaPredicted RBP6.48□□□□□ -1.37
SCFD1-220ENST00000556486 FHITP49789 147 aa6.48□□□□□ -1.37
SCFD1-220ENST00000556486 UBE2D3P61077 147 aa6.48□□□□□ -1.37
SCFD1-220ENST00000556486 UBE2D2P62837 147 aa6.48□□□□□ -1.37
SCFD1-220ENST00000556486 Q0VG73 95 aa6.48□□□□□ -1.37
SCFD1-220ENST00000556486 Q5BKY6 102 aa6.48□□□□□ -1.37
SCFD1-220ENST00000556486 RPL7L1Q6DKI1 246 aaKnown RBP6.48□□□□□ -1.37
SCFD1-220ENST00000556486 ZFP82Q8N141 532 aa6.48□□□□□ -1.37
SCFD1-220ENST00000556486 FMC1Q96HJ9 113 aa6.48□□□□□ -1.37
SCFD1-220ENST00000556486 DNAJC30Q96LL9 226 aa6.48□□□□□ -1.37
SCFD1-220ENST00000556486 KLK12Q9UKR0 248 aa6.48□□□□□ -1.37
SCFD1-220ENST00000556486 PHLDA3Q9Y5J5 127 aa6.48□□□□□ -1.37
SCFD1-220ENST00000556486 TNXBP22105 4242 aa6.47□□□□□ -1.37
SCFD1-220ENST00000556486 BORCS7-ASMTA0A0B4J1R7 106 aa6.47□□□□□ -1.37
SCFD1-220ENST00000556486 LTAP01374 205 aa6.47□□□□□ -1.37
SCFD1-220ENST00000556486 RPL36AP83881 106 aaKnown RBP6.47□□□□□ -1.37
SCFD1-220ENST00000556486 C14orf177Q52M58 125 aa6.47□□□□□ -1.37
SCFD1-220ENST00000556486 FAM74A4Q5TZK3 123 aa6.47□□□□□ -1.37
SCFD1-220ENST00000556486 INO80EQ8NBZ0 244 aaPredicted RBP6.47□□□□□ -1.37
SCFD1-220ENST00000556486 RPL36ALQ969Q0 106 aaKnown RBP6.47□□□□□ -1.37
SCFD1-220ENST00000556486 UBE2WQ96B02 151 aa6.47□□□□□ -1.37
SCFD1-220ENST00000556486 MED28Q9H204 178 aa6.47□□□□□ -1.37
SCFD1-220ENST00000556486 TRBV6-8A0A0A6YYG3 113 aa6.46□□□□□ -1.38
SCFD1-220ENST00000556486 M0R036 132 aa6.46□□□□□ -1.38
SCFD1-220ENST00000556486 CXCL1P09341 107 aa6.46□□□□□ -1.38
SCFD1-220ENST00000556486 TPT1P13693 172 aaKnown RBP6.46□□□□□ -1.38
SCFD1-220ENST00000556486 UBE2G2P60604 165 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms