RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 RBX1P62877 108 aa9.15□□□□□ -0.94
CHMP4BP1-201ENST00000556017 CLPSL2Q6UWE3 100 aa9.15□□□□□ -0.94
CHMP4BP1-201ENST00000556017 MAP1LC3BQ9GZQ8 125 aa9.15□□□□□ -0.94
CHMP4BP1-201ENST00000556017 CXCL1P09341 107 aa9.14□□□□□ -0.95
CHMP4BP1-201ENST00000556017 UBE2G1P62253 170 aa9.14□□□□□ -0.95
CHMP4BP1-201ENST00000556017 ZNF56Q15929 161 aa9.14□□□□□ -0.95
CHMP4BP1-201ENST00000556017 KCNIP4Q6PIL6 250 aa9.14□□□□□ -0.95
CHMP4BP1-201ENST00000556017 LINC00269Q8N2A0 174 aa9.14□□□□□ -0.95
CHMP4BP1-201ENST00000556017 CHCHD5Q9BSY4 110 aa9.14□□□□□ -0.95
CHMP4BP1-201ENST00000556017 FXYD6-FXYD2A0A087WZ82 144 aa9.13□□□□□ -0.95
CHMP4BP1-201ENST00000556017 BORCS7-ASMTA0A0B4J1R7 106 aa9.13□□□□□ -0.95
CHMP4BP1-201ENST00000556017 OR5AL1P0C617 328 aa9.13□□□□□ -0.95
CHMP4BP1-201ENST00000556017 GAGE6Q13070 117 aa9.13□□□□□ -0.95
CHMP4BP1-201ENST00000556017 AKR1C8PQ5T2L2 129 aa9.13□□□□□ -0.95
CHMP4BP1-201ENST00000556017 INO80EQ8NBZ0 244 aaPredicted RBP9.13□□□□□ -0.95
CHMP4BP1-201ENST00000556017 TCEAL7Q9BRU2 100 aa9.13□□□□□ -0.95
CHMP4BP1-201ENST00000556017 GFRA4Q9GZZ7 299 aa9.13□□□□□ -0.95
CHMP4BP1-201ENST00000556017 PAGE4O60829 102 aa9.12□□□□□ -0.95
CHMP4BP1-201ENST00000556017 CNBPP62633 177 aaKnown RBP9.12□□□□□ -0.95
CHMP4BP1-201ENST00000556017 CST9LP1Q5W188 147 aa9.12□□□□□ -0.95
CHMP4BP1-201ENST00000556017 C20orf203Q8NBC4 194 aa9.12□□□□□ -0.95
CHMP4BP1-201ENST00000556017 SCO2A0A1W2PP80 73 aa9.11□□□□□ -0.95
CHMP4BP1-201ENST00000556017 AKR1C3P42330 323 aa9.11□□□□□ -0.95
CHMP4BP1-201ENST00000556017 IQCJQ1A5X6 159 aa9.11□□□□□ -0.95
CHMP4BP1-201ENST00000556017 Q6ZRU5 148 aa9.11□□□□□ -0.95
CHMP4BP1-201ENST00000556017 ZNF471Q9BX82 626 aaPredicted RBP9.11□□□□□ -0.95
CHMP4BP1-201ENST00000556017 IGLV10-54A0A075B6I4 117 aa9.1□□□□□ -0.95
CHMP4BP1-201ENST00000556017 CHTF8P0CG12 524 aa9.1□□□□□ -0.95
CHMP4BP1-201ENST00000556017 DERL1Q9BUN8 251 aa9.1□□□□□ -0.95
CHMP4BP1-201ENST00000556017 IGLV4-60A0A075B6I1 120 aa9.09□□□□□ -0.95
CHMP4BP1-201ENST00000556017 M0QY20 66 aa9.09□□□□□ -0.95
CHMP4BP1-201ENST00000556017 SSTP61278 116 aa9.09□□□□□ -0.95
CHMP4BP1-201ENST00000556017 REG3AQ06141 175 aa9.09□□□□□ -0.95
CHMP4BP1-201ENST00000556017 MBD3L1Q8WWY6 194 aa9.09□□□□□ -0.95
CHMP4BP1-201ENST00000556017 RNF213Q63HN8 5207 aa9.09□□□□□ -0.95
CHMP4BP1-201ENST00000556017 A0A087WYN8 130 aa9.08□□□□□ -0.96
CHMP4BP1-201ENST00000556017 PKIAP61925 76 aa9.08□□□□□ -0.96
CHMP4BP1-201ENST00000556017 TMEM97Q5BJF2 176 aa9.08□□□□□ -0.96
CHMP4BP1-201ENST00000556017 CLRN3Q8NCR9 226 aa9.08□□□□□ -0.96
CHMP4BP1-201ENST00000556017 TRBV25-1A0A075B6N4 114 aa9.07□□□□□ -0.96
CHMP4BP1-201ENST00000556017 F5H697 171 aa9.07□□□□□ -0.96
CHMP4BP1-201ENST00000556017 IGLC6P0CF74 106 aa9.07□□□□□ -0.96
CHMP4BP1-201ENST00000556017 ODF1Q14990 250 aa9.07□□□□□ -0.96
CHMP4BP1-201ENST00000556017 SPANXN1Q5VSR9 72 aa9.07□□□□□ -0.96
CHMP4BP1-201ENST00000556017 BAGE2Q86Y30 109 aa9.07□□□□□ -0.96
CHMP4BP1-201ENST00000556017 STOML3Q8TAV4 291 aa9.07□□□□□ -0.96
CHMP4BP1-201ENST00000556017 SPACA4Q8TDM5 124 aa9.07□□□□□ -0.96
CHMP4BP1-201ENST00000556017 ARPC5O15511 151 aa9.06□□□□□ -0.96
CHMP4BP1-201ENST00000556017 S100A9P06702 114 aaKnown RBP9.06□□□□□ -0.96
CHMP4BP1-201ENST00000556017 GZMBP10144 247 aa9.06□□□□□ -0.96
CHMP4BP1-201ENST00000556017 IGHV1-24A0A0C4DH33 117 aa9.05□□□□□ -0.96
CHMP4BP1-201ENST00000556017 A0A0D9SG52 128 aa9.05□□□□□ -0.96
CHMP4BP1-201ENST00000556017 A0A1B0GUV1 79 aa9.05□□□□□ -0.96
CHMP4BP1-201ENST00000556017 A0A1B0GV50 99 aa9.05□□□□□ -0.96
CHMP4BP1-201ENST00000556017 hDV102S1A0JD36 115 aa9.05□□□□□ -0.96
CHMP4BP1-201ENST00000556017 SUMO4Q6EEV6 95 aa9.05□□□□□ -0.96
CHMP4BP1-201ENST00000556017 C15orf56Q8N910 161 aa9.05□□□□□ -0.96
CHMP4BP1-201ENST00000556017 SFT2D1Q8WV19 159 aa9.05□□□□□ -0.96
CHMP4BP1-201ENST00000556017 AP1S3Q96PC3 154 aa9.05□□□□□ -0.96
CHMP4BP1-201ENST00000556017 PLAC8Q9NZF1 115 aa9.05□□□□□ -0.96
CHMP4BP1-201ENST00000556017 SMLR1H3BR10 107 aa9.04□□□□□ -0.96
CHMP4BP1-201ENST00000556017 TMUB2Q71RG4 321 aa9.04□□□□□ -0.96
CHMP4BP1-201ENST00000556017 RNF185Q96GF1 192 aa9.04□□□□□ -0.96
CHMP4BP1-201ENST00000556017 TRAV8-4A0A0B4J246 113 aa9.03□□□□□ -0.96
CHMP4BP1-201ENST00000556017 PHOX2AO14813 284 aa9.03□□□□□ -0.96
CHMP4BP1-201ENST00000556017 P01737 135 aa9.03□□□□□ -0.96
CHMP4BP1-201ENST00000556017 RPL35P42766 123 aaKnown RBP9.03□□□□□ -0.96
CHMP4BP1-201ENST00000556017 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.03□□□□□ -0.96
CHMP4BP1-201ENST00000556017 FAM213BQ8TBF2 198 aa9.03□□□□□ -0.96
CHMP4BP1-201ENST00000556017 IGHV3-64A0A075B6Q5 118 aa9.02□□□□□ -0.97
CHMP4BP1-201ENST00000556017 C19orf71A6NCJ1 209 aa9.02□□□□□ -0.97
CHMP4BP1-201ENST00000556017 RAB5CP51148 216 aa9.02□□□□□ -0.97
CHMP4BP1-201ENST00000556017 NKX2-5P52952 324 aaPredicted RBP9.02□□□□□ -0.97
CHMP4BP1-201ENST00000556017 CCL20P78556 96 aa9.02□□□□□ -0.97
CHMP4BP1-201ENST00000556017 KCNRGQ8N5I3 272 aa9.02□□□□□ -0.97
CHMP4BP1-201ENST00000556017 C11orf52Q96A22 123 aa9.02□□□□□ -0.97
CHMP4BP1-201ENST00000556017 SMIM17P0DL12 118 aa9.01□□□□□ -0.97
CHMP4BP1-201ENST00000556017 PGLYRP4Q96LB8 373 aa9.01□□□□□ -0.97
CHMP4BP1-201ENST00000556017 TMEM243Q9BU79 118 aa9.01□□□□□ -0.97
CHMP4BP1-201ENST00000556017 MGPP08493 103 aa9□□□□□ -0.97
CHMP4BP1-201ENST00000556017 FER1L6-AS1Q8NA97 138 aa9□□□□□ -0.97
CHMP4BP1-201ENST00000556017 PRSS3P2Q8NHM4 247 aa9□□□□□ -0.97
CHMP4BP1-201ENST00000556017 LINC01600Q96MT4 127 aa9□□□□□ -0.97
CHMP4BP1-201ENST00000556017 TRBV20OR9-2A0A075B6H5 130 aa8.99□□□□□ -0.97
CHMP4BP1-201ENST00000556017 UMAD1C9J7I0 102 aa8.99□□□□□ -0.97
CHMP4BP1-201ENST00000556017 COX6A2Q02221 97 aa8.99□□□□□ -0.97
CHMP4BP1-201ENST00000556017 ZNF345Q14585 488 aa8.99□□□□□ -0.97
CHMP4BP1-201ENST00000556017 RASL11AQ6T310 242 aa8.99□□□□□ -0.97
CHMP4BP1-201ENST00000556017 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.98□□□□□ -0.97
CHMP4BP1-201ENST00000556017 H7C1H1 209 aa8.98□□□□□ -0.97
CHMP4BP1-201ENST00000556017 PFDN1O60925 122 aa8.98□□□□□ -0.97
CHMP4BP1-201ENST00000556017 H2AFB1P0C5Y9 115 aa8.98□□□□□ -0.97
CHMP4BP1-201ENST00000556017 CENPWQ5EE01 88 aa8.98□□□□□ -0.97
CHMP4BP1-201ENST00000556017 TPPP3Q9BW30 176 aa8.98□□□□□ -0.97
CHMP4BP1-201ENST00000556017 NIT2Q9NQR4 276 aa8.98□□□□□ -0.97
CHMP4BP1-201ENST00000556017 GAGE12HA6NDE8 117 aa8.97□□□□□ -0.97
CHMP4BP1-201ENST00000556017 KRTAP10-8P60410 259 aa8.97□□□□□ -0.97
CHMP4BP1-201ENST00000556017 PRR3P79522 188 aaKnown RBP8.97□□□□□ -0.97
CHMP4BP1-201ENST00000556017 LYZL1Q6UWQ5 148 aa8.97□□□□□ -0.97
CHMP4BP1-201ENST00000556017 OR2D3Q8NGH3 330 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms