RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 V9GYQ6 96 aa-0.38□□□□□ -2.47
SRP54-207ENST00000555535 DOCK1Q14185 1865 aa-0.38□□□□□ -2.47
SRP54-207ENST00000555535 APC2O95996 2303 aa-0.38□□□□□ -2.47
SRP54-207ENST00000555535 PI4KAP42356 2102 aa-0.38□□□□□ -2.47
SRP54-207ENST00000555535 TCHHQ07283 1943 aa-0.38□□□□□ -2.47
SRP54-207ENST00000555535 MUC2Q02817 5179 aa-0.39□□□□□ -2.47
SRP54-207ENST00000555535 ALMS1Q8TCU4 4167 aa-0.39□□□□□ -2.47
SRP54-207ENST00000555535 ARAP1Q96P48 1450 aa-0.39□□□□□ -2.47
SRP54-207ENST00000555535 BSNQ9UPA5 3926 aa-0.39□□□□□ -2.47
SRP54-207ENST00000555535 TRAV36DV7A0A075B6V5 113 aa-0.39□□□□□ -2.47
SRP54-207ENST00000555535 TRAV2A0A0B4J234 112 aa-0.39□□□□□ -2.47
SRP54-207ENST00000555535 TSTD3H0UI37 97 aa-0.39□□□□□ -2.47
SRP54-207ENST00000555535 TNFSF15O95150 251 aa-0.39□□□□□ -2.47
SRP54-207ENST00000555535 SPINK8P0C7L1 97 aa-0.39□□□□□ -2.47
SRP54-207ENST00000555535 SPRR1AP35321 89 aa-0.39□□□□□ -2.47
SRP54-207ENST00000555535 S100A7L2Q5SY68 101 aa-0.39□□□□□ -2.47
SRP54-207ENST00000555535 TCTE3Q8IZS6 198 aa-0.39□□□□□ -2.47
SRP54-207ENST00000555535 CNFNQ9BYD5 112 aa-0.39□□□□□ -2.47
SRP54-207ENST00000555535 SCN3BQ9NY72 215 aa-0.39□□□□□ -2.47
SRP54-207ENST00000555535 TRBV10-3A0A0K0K1G6 114 aa-0.4□□□□□ -2.47
SRP54-207ENST00000555535 CCDC179H3BU77 68 aa-0.4□□□□□ -2.47
SRP54-207ENST00000555535 YPEL1O60688 119 aa-0.4□□□□□ -2.47
SRP54-207ENST00000555535 SMIM6P0DI80 62 aa-0.4□□□□□ -2.47
SRP54-207ENST00000555535 LINC01545Q5VT33 79 aa-0.4□□□□□ -2.47
SRP54-207ENST00000555535 CFAP126Q5VTH2 177 aa-0.4□□□□□ -2.47
SRP54-207ENST00000555535 MIC13Q5XKP0 118 aa-0.4□□□□□ -2.47
SRP54-207ENST00000555535 TOMM20LQ6UXN7 152 aa-0.4□□□□□ -2.47
SRP54-207ENST00000555535 NDUFA11Q86Y39 141 aa-0.4□□□□□ -2.47
SRP54-207ENST00000555535 SPTSSBQ8NFR3 76 aa-0.4□□□□□ -2.47
SRP54-207ENST00000555535 SKA2Q8WVK7 121 aaPredicted RBP-0.4□□□□□ -2.47
SRP54-207ENST00000555535 RPRMQ9NS64 109 aa-0.4□□□□□ -2.47
SRP54-207ENST00000555535 HIGD1AQ9Y241 93 aa-0.4□□□□□ -2.47
SRP54-207ENST00000555535 ZMYM4Q5VZL5 1548 aa-0.4□□□□□ -2.47
SRP54-207ENST00000555535 SRRM2Q9UQ35 2752 aaKnown RBP-0.4□□□□□ -2.47
SRP54-207ENST00000555535 SBF2Q86WG5 1849 aa-0.41□□□□□ -2.47
SRP54-207ENST00000555535 PATJQ8NI35 1801 aa-0.41□□□□□ -2.47
SRP54-207ENST00000555535 VWFP04275 2813 aa-0.41□□□□□ -2.47
SRP54-207ENST00000555535 FLNAP21333 2647 aaKnown RBP-0.41□□□□□ -2.47
SRP54-207ENST00000555535 IBTKQ9P2D0 1353 aaPredicted RBP-0.41□□□□□ -2.47
SRP54-207ENST00000555535 DCHS2Q6V1P9 2916 aa-0.41□□□□□ -2.48
SRP54-207ENST00000555535 A6NIN4 97 aa-0.41□□□□□ -2.48
SRP54-207ENST00000555535 LOC730098B7Z3J9 87 aa-0.41□□□□□ -2.48
SRP54-207ENST00000555535 PIRTP0C851 137 aa-0.41□□□□□ -2.48
SRP54-207ENST00000555535 NCS1P62166 190 aa-0.41□□□□□ -2.48
SRP54-207ENST00000555535 UBE2G1P62253 170 aa-0.41□□□□□ -2.48
SRP54-207ENST00000555535 TFAMQ00059 246 aaKnown RBP-0.41□□□□□ -2.48
SRP54-207ENST00000555535 Q5VSD8 79 aa-0.41□□□□□ -2.48
SRP54-207ENST00000555535 ATP11AUNQ6ZP68 121 aa-0.41□□□□□ -2.48
SRP54-207ENST00000555535 SMIM15Q7Z3B0 74 aa-0.41□□□□□ -2.48
SRP54-207ENST00000555535 PKD1L1Q8TDX9 2849 aa-0.41□□□□□ -2.48
SRP54-207ENST00000555535 ERCC6L2Q5T890 1561 aa-0.41□□□□□ -2.48
SRP54-207ENST00000555535 UHRF1BP1LA0JNW5 1464 aa-0.41□□□□□ -2.48
SRP54-207ENST00000555535 APOC4-APOC2K7ER74 178 aa-0.42□□□□□ -2.48
SRP54-207ENST00000555535 BCE1O60756 84 aa-0.42□□□□□ -2.48
SRP54-207ENST00000555535 SPANXN1Q5VSR9 72 aa-0.42□□□□□ -2.48
SRP54-207ENST00000555535 CTAGE3PQ8IX95 158 aa-0.42□□□□□ -2.48
SRP54-207ENST00000555535 VSTM2AQ8TAG5 236 aa-0.42□□□□□ -2.48
SRP54-207ENST00000555535 MAGOHBQ96A72 148 aaKnown RBP-0.42□□□□□ -2.48
SRP54-207ENST00000555535 SELENOSQ9BQE4 189 aa-0.42□□□□□ -2.48
SRP54-207ENST00000555535 WFDC6Q9BQY6 131 aa-0.42□□□□□ -2.48
SRP54-207ENST00000555535 FXYD6Q9H0Q3 95 aa-0.42□□□□□ -2.48
SRP54-207ENST00000555535 SMPXQ9UHP9 88 aa-0.42□□□□□ -2.48
SRP54-207ENST00000555535 SPCS1Q9Y6A9 102 aa-0.42□□□□□ -2.48
SRP54-207ENST00000555535 LRP6O75581 1613 aa-0.42□□□□□ -2.48
SRP54-207ENST00000555535 MYH7P12883 1935 aa-0.42□□□□□ -2.48
SRP54-207ENST00000555535 BTAF1O14981 1849 aa-0.43□□□□□ -2.48
SRP54-207ENST00000555535 KDM5AP29375 1690 aaKnown RBP-0.43□□□□□ -2.48
SRP54-207ENST00000555535 ZNF609O15014 1411 aa-0.43□□□□□ -2.48
SRP54-207ENST00000555535 C10orf71Q711Q0 1435 aa-0.43□□□□□ -2.48
SRP54-207ENST00000555535 FAM236AA0A1B0GUQ0 79 aa-0.43□□□□□ -2.48
SRP54-207ENST00000555535 FAM236BA0A1B0GV22 79 aa-0.43□□□□□ -2.48
SRP54-207ENST00000555535 K7EQZ3 153 aa-0.43□□□□□ -2.48
SRP54-207ENST00000555535 M0R2P5 195 aa-0.43□□□□□ -2.48
SRP54-207ENST00000555535 UBE2D1P51668 147 aa-0.43□□□□□ -2.48
SRP54-207ENST00000555535 CCDC153Q494R4 210 aa-0.43□□□□□ -2.48
SRP54-207ENST00000555535 BAGE3Q86Y29 109 aa-0.43□□□□□ -2.48
SRP54-207ENST00000555535 PSMG3Q9BT73 122 aaPredicted RBP-0.43□□□□□ -2.48
SRP54-207ENST00000555535 CENPHQ9H3R5 247 aa-0.43□□□□□ -2.48
SRP54-207ENST00000555535 GINS2Q9Y248 185 aa-0.43□□□□□ -2.48
SRP54-207ENST00000555535 HSPB11Q9Y547 144 aa-0.43□□□□□ -2.48
SRP54-207ENST00000555535 PSME4Q14997 1843 aa-0.43□□□□□ -2.48
SRP54-207ENST00000555535 CHD6Q8TD26 2715 aa-0.44□□□□□ -2.48
SRP54-207ENST00000555535 ACANP16112 2415 aa-0.44□□□□□ -2.48
SRP54-207ENST00000555535 LAMC1P11047 1609 aa-0.44□□□□□ -2.48
SRP54-207ENST00000555535 A0A1B0GX51 115 aa-0.44□□□□□ -2.48
SRP54-207ENST00000555535 CLPSL1A2RUU4 121 aa-0.44□□□□□ -2.48
SRP54-207ENST00000555535 IL5P05113 134 aa-0.44□□□□□ -2.48
SRP54-207ENST00000555535 RRAS2P62070 204 aaPredicted RBP-0.44□□□□□ -2.48
SRP54-207ENST00000555535 C9orf116Q5BN46 136 aaPredicted RBP-0.44□□□□□ -2.48
SRP54-207ENST00000555535 SPAG11AQ6PDA7 123 aa-0.44□□□□□ -2.48
SRP54-207ENST00000555535 SMIM3Q9BZL3 60 aa-0.44□□□□□ -2.48
SRP54-207ENST00000555535 ARAP2Q8WZ64 1704 aa-0.44□□□□□ -2.48
SRP54-207ENST00000555535 GVINP1Q7Z2Y8 2422 aa-0.45□□□□□ -2.48
SRP54-207ENST00000555535 LRRC37A3O60309 1634 aa-0.45□□□□□ -2.48
SRP54-207ENST00000555535 BCL9LQ86UU0 1499 aa-0.45□□□□□ -2.48
SRP54-207ENST00000555535 TRBV20-1A0A075B6N2 111 aa-0.45□□□□□ -2.48
SRP54-207ENST00000555535 CTXND1A0A1B0GTU2 59 aa-0.45□□□□□ -2.48
SRP54-207ENST00000555535 GNG14A0A1W2PPG7 69 aa-0.45□□□□□ -2.48
SRP54-207ENST00000555535 H0YJX3 145 aa-0.45□□□□□ -2.48
SRP54-207ENST00000555535 PIN1P1O15428 100 aa-0.45□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms